Tdro041238.2
Basic Information
- Insect
- Trichopria drosophilae
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_030407085.1
- Location
- CM059583.1:169674312-169690251[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-110 4.4e-105 353.6 36.5 1 300 31 326 31 326 0.95 2 2 0.0037 1.7e+02 3.6 3.1 120 171 324 375 323 382 0.93
Sequence Information
- Coding Sequence
- ATGGCCATGGAGTCTTCGGTGGCAGGACGGAGGCGAACTGCCACCAAACACTCTGCCGAGGACCAGGCGTTAGATCAGATCGCCAAAGAGGCAGAAGCAAGACTAGCGGCTCGCAGACAAGCAAGAGCTGAAGCACGAGAAATCCGAATGAGAGAATTAGAGCGACAACAGAAAGAATCCGAGGAGAATGCGGACAGGGTATACGACATGTGTACAgACAATAATCGAGCAATGCGGATGACACCAGATCCCATACGAACGTCTCGCTTGCTTGGAAATGCCAATAATTTTCAATCGAGTCGAAGGTCTTCCGAAGATTCATTAGAGGATGCGGGTCTCGGAAAAGATCCTCGGttggAACTGAAGGAGTTTGAAGAAAAATTCCGGAAAGCTATGATTGCCAATGCCCAGCTTGACAATGAAAAGTCATCGTATTCGTATCAAGTTGATCTCCTGAAAGACAAACTAGAGGAACTTGAGGAAACAACCGCTCAACTCAGGCGCGAACTCAGGGAAAAGAATCGAGAAGCAGAGCAAGCAAAACGTCTGAGTCAGCGGTTGAAAGAGGATTTGGATGTGTGTCAAGCGCAACTTTTAGAAAGGGATACGTTAATACAAGAAAATGGACTTGTTATAGTGGAGGATGAAGATAGCGATATCGAGGATGATGaagataatgtaaaaattaatggacCTTCCAGACGAAAACGAGTATTAGTCAGTACCGAAGCTGctgaattattacaaaatgctGGAGAAGGTTCTTTAGATGTTCGGCTGAGAAAGTTTGCCTCGGAAAATAAAGAGTTACAGGACGAAGTGAGACATTTGAGGCTAGAATTGGATGAAGCCAGAAATCGAATGAGGCCTGAAAGGTCGAGTTCTCTCTTGGATTCGGATGATATACAACGAGAAACCAATAAACTTTTATCCGATTACAAGTTTAAAATTCAGAAAGCAGAGCAAGACGTTTCAACGTTACAGGCAACAGTGGCGAGGTTAGAGAGTCAAGTCATCCGCTACAAATCTGCTGCAGAAGCCTCAGAAAAAGCCGAGGATGATTTGAAAGTTGAAAAGAGAAAACTGCAAAGAGAGgtCAGAGAATCACAAAGTCGAGTAGAAGAATTGGAAGTATCTAATTCCCATCTGCAACGTCGACTGGACAAACTGAAAAATGCCAAGGTTGCCTTGTTGAAGGATCTTTGA
- Protein Sequence
- MAMESSVAGRRRTATKHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKESEENADRVYDMCTDNNRAMRMTPDPIRTSRLLGNANNFQSSRRSSEDSLEDAGLGKDPRLELKEFEEKFRKAMIANAQLDNEKSSYSYQVDLLKDKLEELEETTAQLRRELREKNREAEQAKRLSQRLKEDLDVCQAQLLERDTLIQENGLVIVEDEDSDIEDDEDNVKINGPSRRKRVLVSTEAAELLQNAGEGSLDVRLRKFASENKELQDEVRHLRLELDEARNRMRPERSSSLLDSDDIQRETNKLLSDYKFKIQKAEQDVSTLQATVARLESQVIRYKSAAEASEKAEDDLKVEKRKLQREVRESQSRVEELEVSNSHLQRRLDKLKNAKVALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01489376;
- 80% Identity
- -