Tpra012974.1
Basic Information
- Insect
- Tricholauxania praeusta
- Gene Symbol
- Pxt
- Assembly
- GCA_949775025.1
- Location
- OX459029.1:33072478-33090737[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-100 2.1e-96 324.1 23.6 1 299 31 327 31 328 0.89 2 2 0.39 3.5e+03 -1.7 2.5 134 164 361 391 332 422 0.59
Sequence Information
- Coding Sequence
- ATGGATAGTACCAGTATCGCAGGTAGACGTCGTACAAGTTCTTCCCGTGCCAATGCTGAGGATCAAGCGCTTGACCAAATTGCTAAGGAGGCAGAAGCTCGGCTGGCAGCACGTCGGCAGGCGAGAGCTGAAGCACGAGAAGCGCGTTTGCGGGAATTAGAACGTCAGCAAAAGAAACAAGAACAAAATGCAGATCGAGTTTTTGATATTGGCAGCGAATCTTTGGCCCGCTCACGTATTGTGGCAGGCCTAAGTATTGGAGGCGGCAGCAGCAGTTTTTCTGTGACACGTGCCAGCTCCATGTCCTCCCGGCGCAGCAGTGAAGATTCTTTGCAGGATGAAGAAGCAGCGGCGGCAGGACGTAGCTTGCGTGATTTGCGCCATGAGCTGCGAGATGTAGAAGAGCGCTTTCGCAAAGTGATTATTGCTAATGCCCAACTAGATAATGAATGTGCTTCGCAAGTGTATCAGATACAGTTTCTTAAAGATAAATTCGAAGAGGTCGTAGAGTCATATGCACTGCTACAGCGTGAATTTAAGGAGAAGAGTAGAGATTGCAATGCTCTAAAACGAGATGTGGAAAAATTGCGGGAGGATTTCAAGTTGGTGCAAGGTCAATTGGAGGAACGTGATACACTCATCACTGAACAGGGTTTGGTCATCATCTCTATAGAAAATAAAGATGGCACAGATGCCAAGCGTGCTCTAGTCACTATAGATAATGCACAAATTTTAGGTTCTGTGCAGGGTTCTCTAGATATGCGActgaaaaagtttaatgaggAAAAACAACAGCTCGTAGCTGAAGTACAAAATTTACAGCAGCAATTGGACTGTTATAGACAAAAAGGAAATAAAGGCCGGCATGGTAGCGGCTTTATGAATGGTCCCGAATCAAATGAGTTCGATGCACATCGagaaactaataaaatattatcaGATTATAAATACAAATTGCAAAAAGCAGAACAAGAAGTTGCTAGTCTACAAGCCAGTTTAGCAAGATCGGAAACGCAAGTGATACGCTATAAGAGTACATCAGAGGCAGCTGAGAAAGCAGAGGctgaattaaaaattgaaaggaGAAAATTGCAACGAGAAAATCGGGAGGCAATGGAGCATTTAGAAGAATTGGAAACATCAAATAATCACCTGCTTAAACGTttggataaattgaaaaatgcgaAAATTAACATAAATATTCCAAAAGAAGAACAAGATTTTTTAGACAAATTCTCTACAGAAGATTATAAAAAGTTTGTTGAGTTTGGAACTGAATCAGATGAACGAGAAACAAGATTGGAAGCAAACCTTCAAGTTTCAGCTATAACTGTACATAATGGAACCCTATCACATAGCCAATTGCTAGAAACCTGGCCGAGCTCGGAGGCCCAGGAAGACAGTGATATTGCAACAAAAATACTGAAATGCAGTCTATATATATACAATTCGAAATGTATCGTAAACGGTATTAGTGGCGATAACTGCCGTACATACTGTGTAAAAAAATCCATACCGGAAGATACGGACTTAGGACGCTCATGCCAAAAGATACTTCAGGGACCAAGAGAGGGACATCATGCTTTGCGTCGCTTACTGCCTTGTAAATATAAAGATGGATTTTACACGATGTTTTCCGACAACAAACTCCCACCTGCACGCTTCGTTAGTAGCAGCACACTACATGGCCACAGCACAAGTGTACAGAGTGGTAATGAAGCACTTGATGATGGACAACGGAATTTAGCTTTGGTGCAATGGACACAATTTATAGAGCATGACTTAAGTAAAACAGTTGCTACTTCCATGGATAATGGTAATTCGATCGACTGCTGTAATCGTGAGAACTACAAATTACAACCGCGTTATCTTCATCCTGCCTGTGCTCCACTCTTAGGAAAGGATTCTTCAAACGAGAACGGTAGAGAAACTTGTTTGAATTATGTGCGTAGTGCTTTGGCAGTGAGTTCGAACTGTAATTTTGGTGCAGCCCAACAgttgaaCGAAGCAACAGGTTACCTTGATTTATCTCAACTTTACGGCTACACAAGCGATGCACAGCGGCGCATGCGAACTAATCATCTGGGTCAAATTAAGTCcacaaaattttcccaaaaattagCTGACGACATGTTGCCACTTGCAATTGCGGAACGTAACGCATTCTGTGCACTTAAATTTGACAGCAATGCAACGTGTTATATGGCGGGAGATTCGCGTGTCAATAGCAATCCATTTTCGATTGTATTATACACGATCTTTATGCGATCACACAATCAAATCGCAGAGAATTTACATCTGCAGCACAATGAATGGAATGACGATCGCTTGTACGATGCGGCTAAAGCGATCAATATCAATATATATCGGCATATTGTGTTCAACGAGTGGTTACCAGCGGTCTTGGGTCAGCAGTTGGCCAATCAAATAAGCGCCGAATCCATACAACAGCGAGAAAAATCCAATGTTAAAGTCTCTGAAttacaaatttcaaatgaatttgctgttgctgctgtgcGTTTTTATTTCTCTATGATGCCAAATGCATTGCATGATTTTGCCACTGGTTCAATTTTGGACAATGATATACATAAAGGGTATACGCATTATACGATTAGCAACAATAACATATCACCTACACCAAATATTTTCCCACTTCAAGATCATATCTATAAATCACAAATTGTATCGAATTCACAAGAGTTGAACAAAGTATTGGAATCAATACTGCATCAATATGCAATGAAAATGGATTCGTCATATGCAGAAAGCtttattcaaaattatatgGGCACACGACATCCTACACGCTTGGACATTTTAGCTTTTGATATTCAACGTGGTCGGGACCATGGCCTACAGGGTTATGTCAAATACTTGGAACAGTGTCAAGCGATACGCATAAAGTCCTGGACGGATTTGGAACGCTATATACATTTAAGCGATCTAAACAAATTGAAGTCAGCCTATACTAATTGGAACGATGTAGACTTAATAATAGGTGGCATTTCAGAGAAGCCTTTAAATGGTTCAATTGTTGGTCCCACATTCACTTGTATTTTGGCGGAACAATTTTCTAAGATACATCAATGGCATCAAGTGCTGGAGCAACAGAAACCACAAGAACAAATGAACGCATATAACAATTGGACTGGAGCAAAGTTTTTATGTGCAAACTCACAGATCGAAAAtgtacccaaaaatatttttaaaatcacctCAAAAGAGTAA
- Protein Sequence
- MDSTSIAGRRRTSSSRANAEDQALDQIAKEAEARLAARRQARAEAREARLRELERQQKKQEQNADRVFDIGSESLARSRIVAGLSIGGGSSSFSVTRASSMSSRRSSEDSLQDEEAAAAGRSLRDLRHELRDVEERFRKVIIANAQLDNECASQVYQIQFLKDKFEEVVESYALLQREFKEKSRDCNALKRDVEKLREDFKLVQGQLEERDTLITEQGLVIISIENKDGTDAKRALVTIDNAQILGSVQGSLDMRLKKFNEEKQQLVAEVQNLQQQLDCYRQKGNKGRHGSGFMNGPESNEFDAHRETNKILSDYKYKLQKAEQEVASLQASLARSETQVIRYKSTSEAAEKAEAELKIERRKLQRENREAMEHLEELETSNNHLLKRLDKLKNAKININIPKEEQDFLDKFSTEDYKKFVEFGTESDERETRLEANLQVSAITVHNGTLSHSQLLETWPSSEAQEDSDIATKILKCSLYIYNSKCIVNGISGDNCRTYCVKKSIPEDTDLGRSCQKILQGPREGHHALRRLLPCKYKDGFYTMFSDNKLPPARFVSSSTLHGHSTSVQSGNEALDDGQRNLALVQWTQFIEHDLSKTVATSMDNGNSIDCCNRENYKLQPRYLHPACAPLLGKDSSNENGRETCLNYVRSALAVSSNCNFGAAQQLNEATGYLDLSQLYGYTSDAQRRMRTNHLGQIKSTKFSQKLADDMLPLAIAERNAFCALKFDSNATCYMAGDSRVNSNPFSIVLYTIFMRSHNQIAENLHLQHNEWNDDRLYDAAKAININIYRHIVFNEWLPAVLGQQLANQISAESIQQREKSNVKVSELQISNEFAVAAVRFYFSMMPNALHDFATGSILDNDIHKGYTHYTISNNNISPTPNIFPLQDHIYKSQIVSNSQELNKVLESILHQYAMKMDSSYAESFIQNYMGTRHPTRLDILAFDIQRGRDHGLQGYVKYLEQCQAIRIKSWTDLERYIHLSDLNKLKSAYTNWNDVDLIIGGISEKPLNGSIVGPTFTCILAEQFSKIHQWHQVLEQQKPQEQMNAYNNWTGAKFLCANSQIENVPKNIFKITSKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00257822;
- 90% Identity
- -
- 80% Identity
- -