Tpra028769.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tricholauxania praeusta
Gene Symbol
sip1
Assembly
GCA_949775025.1
Location
OX459030.1:113629111-113633898[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-94 2.7e-90 304.0 14.1 1 275 421 694 421 694 0.98
2 2 1 1.5e+04 -3.5 0.0 245 268 709 732 702 738 0.63

Sequence Information

Coding Sequence
atgTCAGACAATGAGTATGAACGTTTTGAAATTTCCGACTATGATTTAGCTAATGAATTCAATATAAATCGACCACGGCGACGGCAAACAAAACATGAGCAAATATATggCATTTGGGCTGACGATAGTGAAAATGAAAGCGACGATGATACTGGCAACCGTCGTGGTCGTCGTGGACGTGGTGGCCTGGGTGGCGGAGgcagtaagaaaacaaaagattATACGGCACCAGTGAGTTTTGTCGCTGGCGGAATAGAACAATctggaaagaaaaataaaaaaaaacaagaacaaccAGAAGGTCTGGAGGATGAAAATCCTATAACAGATGAAGaagAAGACACACGTCCTTCCTTTGGACACAAACAGCCAGAACTAGAAGATGGCTCTCCAGACTCTAGCGCATCATCAGATGATGAGTCGactaagaaaacaacaacagcgacaACATCATCGCGCAGTGGGCTTGGAATGAACCAAAAAAGTAACATTACTAATGTTCGTAATGTTGGTGCATGGGAGCAACACACACGTGGTATTGGTGCCAAGTTATTGTTACAGATGGGCTACAAACCAGGTATGGGTCTAGGTAAGGACTTGCAAGGTATCTCTCAGCCAGTGATGGCACATGTGCGTAAAGGACGTGGTGCTATTGGTGCGTATGGACCAGAAACAGCTGCAAGTATTGGTGGCAAAGGtAATGTACCAAAAGAAGATGAGGATGTTCGCGAAACCAAAGAATTTAAGGAGAAGCTTAACAAATGGAAGAAAGATGGTGATGCACGTCCAGATAAAACAAAACGTTACTATTATGTATCTGTTGAGGAAGTAATTGAAAAGGGAAAGAAAAGCAATTTTATGTTACCCGAAAAAATCAGtaaaaaacTTGGCAACGTTCCTGTAATTGATATGACCGGTCCAGAAAAACGTATTCTCAGCGGCTATCATGCACTGAGTACAAACAAAGTGCTCGATGAGGATCTTTATGATTTGCAatcgacaacagcaacaacaaagaaaTCCACTAGCTTTGCATTACCTGAATTAAtgcacaatttaaatttaattgttgatCTATGTGAACGCGATATTATAGAATTAGATAAAACCGAACGTTTGGCTAACGATAAGCAGCAAGCGTTGGAACATGaacgaaaaaatttacaagaaattgTAAAATTGGAACAGAATCATATTGAAACGCTAGAAGAAGTTGATAAGCTTGTCGATGAGCTAACAAATGAAGAATCTATTTTAACACTCGACAGAGCGGAaaaaatctttctaacattGCAACAGCAATACGCAGCTGAATATCAAGAATTTGGCTTAGGTGATCTAGCGGCTGGTGTAATAGCACCATTAATGAAGGGAACTTTGGAAAATTGGCAGCCATTGTCTGAACCTACACGGCatattaatttgattaaaaaatggCGTAGCATTTTAGATAAAACGGATGATACAGTCGCTGTACAGCAAACGGAAACACGTAATGTTTTTAATCCTTACTCTTCACTTATTTGGGCTGGTGTTATACCTAGTTTTCGTGCTTGTTCCACTGCTTGGAATCCGAAACAACATCAGAAAATGGCTGCTTTGTTAGATAGTTGGGCACCGCTTTTTCCCAGTTGGATTTTAGATTCTGTACTGGAGCAATTAGTTTTGCCACGCCTTACAGCTGGTGTAAAAGAATGGGATCCACTGACAGATACGGTACCCATTCACATTTGGATATTGCCATGGGCTTCGATATTGGGTCACAAAATGGAGGAATCAATATTTCCAACAATACGTGAAAAGCTTGGTAATGCGTTACTTGCTTGGATGCCGCAGGATCGTTCAGCACGCGCTATGCTTACACCTTGGAAAGGTGCTTTCGATGATGCTGAAATTATAACTTTTCTTATGCAGCATATTATTCCGAAATTGCAGCTtgtgttaaatgaatttattataaatCCAATGCAGCAGGACTTGGAATTGTGGAATCAGGTTTGGGAATGGCATGAACTCATACCACCCATGCACATGGCTCAATTGCTTGATAAATATTTCTTCCCAAAGTGGATGCAGGTTTTAGTGGTATGGCTCAATCAATCACCTGATTATGCAGAAATTTCACGCTGGTACTCCGGCTGGAAGAGTATGTTAACAGAAGATATACTTAAAGAACCCATAGTCAAGGAACATTTGCGACGTGCACTTGAAATTATGCAACGTTCAACTGAGACGGCGCCAGAACCACCAAGCATGTCAAATATCAATATGCCGACACTGGCACCATCACCACCTGTACCACCACCTTCGttattgaattttcaacttccagctGCGTCCGCACAATTGGAATTCAAAGAGCTGGTATCACAAAAATGTTCAGAGCTTGGTATACTATTTGCACCTTTGCCGGGTAGACGTGAGCTGGGCAAACAGGTATATCGCGTTGgtaaactattttgttttatcGACCGTAATGTAATCATGCTGGGCGATATGAGCCTTAATAATTGGACACCAACATCAGTGGCGCAGATGCTTGAAAGTGCAGTTACGGGTGTGCTGTAA
Protein Sequence
MSDNEYERFEISDYDLANEFNINRPRRRQTKHEQIYGIWADDSENESDDDTGNRRGRRGRGGLGGGGSKKTKDYTAPVSFVAGGIEQSGKKNKKKQEQPEGLEDENPITDEEEDTRPSFGHKQPELEDGSPDSSASSDDESTKKTTTATTSSRSGLGMNQKSNITNVRNVGAWEQHTRGIGAKLLLQMGYKPGMGLGKDLQGISQPVMAHVRKGRGAIGAYGPETAASIGGKGNVPKEDEDVRETKEFKEKLNKWKKDGDARPDKTKRYYYVSVEEVIEKGKKSNFMLPEKISKKLGNVPVIDMTGPEKRILSGYHALSTNKVLDEDLYDLQSTTATTKKSTSFALPELMHNLNLIVDLCERDIIELDKTERLANDKQQALEHERKNLQEIVKLEQNHIETLEEVDKLVDELTNEESILTLDRAEKIFLTLQQQYAAEYQEFGLGDLAAGVIAPLMKGTLENWQPLSEPTRHINLIKKWRSILDKTDDTVAVQQTETRNVFNPYSSLIWAGVIPSFRACSTAWNPKQHQKMAALLDSWAPLFPSWILDSVLEQLVLPRLTAGVKEWDPLTDTVPIHIWILPWASILGHKMEESIFPTIREKLGNALLAWMPQDRSARAMLTPWKGAFDDAEIITFLMQHIIPKLQLVLNEFIINPMQQDLELWNQVWEWHELIPPMHMAQLLDKYFFPKWMQVLVVWLNQSPDYAEISRWYSGWKSMLTEDILKEPIVKEHLRRALEIMQRSTETAPEPPSMSNINMPTLAPSPPVPPPSLLNFQLPAASAQLEFKELVSQKCSELGILFAPLPGRRELGKQVYRVGKLFCFIDRNVIMLGDMSLNNWTPTSVAQMLESAVTGVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00972190; iTF_00257819;
90% Identity
iTF_00257819; iTF_00972190;
80% Identity
-