Mpla021517.1
Basic Information
- Insect
- Meiosimyza platycephala
- Gene Symbol
- sip1
- Assembly
- GCA_963662105.1
- Location
- OY759210.1:85909195-85912452[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-94 1.2e-89 301.4 15.6 1 275 421 694 421 694 0.98 2 2 0.27 4.4e+03 -2.2 0.0 243 269 707 733 699 739 0.69
Sequence Information
- Coding Sequence
- atgtCAGACAATGAGTATGAACGTTTTGAAATTTCCGACTATGATTTAGCTAATGAATTCAATATAAATCGACCAAGGAGACGGCAAACAAAACATGAGCAAATATATGgcATTTGGGCTGACGATAGTGAAAATGAAAGCGACGATGATACTGGCAACCGCCGCGGACGTCGTGGACGTGGTGGCCTAGGTAGCGGAGgcagtaaaaaaacaaaagattataCGGCACCAGTGAGCTTTGTAGCTGGCGGTATACAACAATctggaaagaaaaataaaaaacaacaggAACAACCAGAAGGTCTTGAAGATGAGAATCCTATAACTGATGAAGAAgAAGACTCACGTCCTTCCTTTGGACGCAAACAACCAGAACTTGAAGATGGCTCTCCAGACTCTAGCGCATCATCAGAAGATGAGCCGGCTAAGAAAACCACAACAGCGACAACTTCATCGCGCAGTGGTCTTGGAATGAACCAAAAAAGTAACATTACTAATGATCGTAATGTTGGTGCTTGGGAGCAACATACACGTGGTATTGGTGCCAAGCTATTGTTGCAGATGGGCTACAAACCAGGCATGGGTCTGGGTAAGGACTTGCAAGGTATATCTCAACCAGTGATGGCACATGTGCGTAAGGGACGTGGAGCTATTGGTGCTTATGGTCCAGAAACAGCTGCAAGTATTGGTGGCAAgggtaATGTACCAAAAGAGGATGAGGATATTCGAGAAACCAAAGAATTCAAGGAGAAGCTTAACAAATGGAAGAAAGATGGTGATGCACGTCAAGATAAAACGAAACGTTACTATTATGTATCTGTTGAGGAAGTAATTGAAAAGGGAaagaaaagcaattttttgttacctgaaaaaataagtaaaAAGCTTGGCAACGTCCCTGTAATTGATATGACTGGTCCAGAGAAACGTATACTCAGCGGCTATCATGCATTGAGTACAAATAAAGTGCTCGATGAAGATCTTTATGATGTACAgtcgacaacagcaacaacaaagaaaTCCACCAGCTTTGCATTGCCTGAATTAAtgcacaatttaaatttaattgttgatCTATGTGAACGCGATATTATTGAATTGGATAAAACCGAACGTTTAGCTAGCGATAGGCAGCAAGCGTTGGAACATGaacgaaaaaatttacaagaaattgttaaattaGAACATAATCATATTCAAACGCTAGAAGAAGTAGATAAGCTTGTCGATGAGCTAACAAACGAAGAATCTATTTTAACACTCGACAGAGCGGAGAAAATCTTTCTAACATTGCAACAGCAATATGCGGCTGAATATCAAGAATTTGGCTTAGGTGATCTAGCGGCTGGTGTAATAGCACCTTTAATGAAAGTAACCTTGGAAAATTGGCAGCCATTGTCTGAACCTACACGGcatattaatttgattaaaaaatggCGCAGCATTTTAGATAAAACGGATGATACGGTTGCTGTACAGCAAACGGAAACACGTAATGTTTTTAATCCTTACTCTTCACTTATTTGGGCAGGTGTTATACCTAGTTTTCGTGCTTGTTCTACTGCTTGGAATCCCAAACAACATCAAAAAATGGCTGCTTTGTTAGATAGTTGGGCACCGCTTTTTCCCAGTTGGATTTTAGATTCTGTACTGGAGCAATTAGTTTTGCCACGCCTTACAGCTGGTGTAAAAGAATGGGATCCACTAACAGATACGGTGCCCATTCACATTTGGATATTGCCGTGGACTTCTATATTAGGTCACAAAATGGAGGAAACAATATTTCCAACAATACGTGAAAAGCTTGGTAATGCGCTACTTGCTTGGATGCCGCAGGATCGATCAGCGCGTGCTATGCTTACACCTTGGAAAGGTGCTTTCGATGATGCTgaaatgataatttttcttatgCAGCATATTATTCCGAAATTGCAGCTTGTGTTGaatgaatttattataaatcCATTGCAGCAGGACTTGGAATTGTGGAATCAGGTTTGGGAATGGCATGAACTCATACCACCCATGCACATGGCTCAATTGCTTGATAAATATTTCTTCCCAAAGTGGATGCAGGTTTTAGTGGTTTGGCTCAATCAATCACCCGATTATGCAGAAATTTCACGCTGGTACACCGGCTGGAAGAGTATGTTAACAGAAGATATACTTAAAGAACCCATAGTTAAGGAACATTTGCGTCGTGCACTTGAAATTATGCAACGTTCAACTGAAACAGCGCCAGAACCACCTAGCATGTCAAATATCAATATGCCAACACCAATGGCACCATCACCACCTGTACCACCACCTTCGTTATTGAATTTTCAACTTCCAGCTGCGTCCGCACAATTGGAATTCAAAGAGCTGGTATCACAAAAATGTTCAGAGCTTGGTATATTATTTGCACCGTTGCCGGGTAGACGCGAGCTGGGCAAACAGgTATATCGCGTTGGAAAACTATTTTGTTATATCGACCGCAATGTAATCATGCTGGGCGACATGAGCCTTAATAATTGGACACCAACATCAGTGGCGCAGATGCTTGAAAGTGCAGTTACGGGTGTGCTGTAA
- Protein Sequence
- MSDNEYERFEISDYDLANEFNINRPRRRQTKHEQIYGIWADDSENESDDDTGNRRGRRGRGGLGSGGSKKTKDYTAPVSFVAGGIQQSGKKNKKQQEQPEGLEDENPITDEEEDSRPSFGRKQPELEDGSPDSSASSEDEPAKKTTTATTSSRSGLGMNQKSNITNDRNVGAWEQHTRGIGAKLLLQMGYKPGMGLGKDLQGISQPVMAHVRKGRGAIGAYGPETAASIGGKGNVPKEDEDIRETKEFKEKLNKWKKDGDARQDKTKRYYYVSVEEVIEKGKKSNFLLPEKISKKLGNVPVIDMTGPEKRILSGYHALSTNKVLDEDLYDVQSTTATTKKSTSFALPELMHNLNLIVDLCERDIIELDKTERLASDRQQALEHERKNLQEIVKLEHNHIQTLEEVDKLVDELTNEESILTLDRAEKIFLTLQQQYAAEYQEFGLGDLAAGVIAPLMKVTLENWQPLSEPTRHINLIKKWRSILDKTDDTVAVQQTETRNVFNPYSSLIWAGVIPSFRACSTAWNPKQHQKMAALLDSWAPLFPSWILDSVLEQLVLPRLTAGVKEWDPLTDTVPIHIWILPWTSILGHKMEETIFPTIREKLGNALLAWMPQDRSARAMLTPWKGAFDDAEMIIFLMQHIIPKLQLVLNEFIINPLQQDLELWNQVWEWHELIPPMHMAQLLDKYFFPKWMQVLVVWLNQSPDYAEISRWYTGWKSMLTEDILKEPIVKEHLRRALEIMQRSTETAPEPPSMSNINMPTPMAPSPPVPPPSLLNFQLPAASAQLEFKELVSQKCSELGILFAPLPGRRELGKQVYRVGKLFCYIDRNVIMLGDMSLNNWTPTSVAQMLESAVTGVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01486173;
- 90% Identity
- iTF_01486173;
- 80% Identity
- -