Tpre003323.1
Basic Information
- Insect
- Trichogramma pretiosum
- Gene Symbol
- UTG2
- Assembly
- GCA_000599845.3
- Location
- NW:90976-95192[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1.7 7e+02 -0.0 0.0 24 48 191 215 185 217 0.81 2 6 0.32 1.3e+02 2.3 0.0 26 48 249 271 247 276 0.92 3 6 0.0058 2.4 7.8 0.0 26 48 277 299 273 302 0.92 4 6 2.2 8.9e+02 -0.4 0.0 26 48 361 383 359 387 0.89 5 6 0.069 29 4.4 0.1 26 48 389 411 383 415 0.89 6 6 0.035 15 5.3 0.0 26 48 417 439 411 442 0.90
Sequence Information
- Coding Sequence
- ATGAGAAAGATGGAATCTAGTGGTTTATTCAGCTCCGCCATCAGAGTGAAGGACGAGCCTAGTGATGCGCTGCTTAGTGAAAATGATAGTGAAATGATCGACGAAAAACCCgatcttaaaaatttacaatccTTATCATTTCATCAAGAAAATCCTacCCATACACTTCCAAAATGTGACATTAAACTTGAAAGTGAGCTTGATGAGAAAGTGGAAATAGTCGTTGAATGTGAAGATGTCAAACCCAATTGGAATTCATTATCAgataagaaaatgaaaaattatttttcaaatcatttgcGGAATGTAAAAGATAATAACGAtgtttacaaaaatcaaaacacaATTAAAGTAGAAATTGGCAAGGAAGTCAAACAAGAATTTTTTGGTGACACTGCAGAAGAATCGAATTCGGATTTTGATAGTGAACTtgacaagaaaaataaaaaaggaaacggTACCAAACAATCAGTGAATGGTAGTAACGGCCATGATAGTGATAAACatggaaaaacattttcacgaAAAGATGTTCTGAAACGCCACATCGTTTCAATGCATAGTAAAATCACTCAcacatgcgatatatgcgggTCCAAATTCACACTTAGAACTtctctcaaaaaacacatcgatacGATGCATAATGGAATAAGAagtgcatgtgatatttgcggaaataaatttacaaaaaaagctaGTCTCAAAATTCATATCGACTCAATTCACAATGGTGTcagacatgcatgtgatatttgcggaaataaatttacaaacaagagtaatctcaaaaagcacattGATGCGAAGCACGATGGTGtcaaacatgcatgtgatatttgcggaaagaagttCTCAGGTAAAAGGAATATTAGAAGGCACATTGATATGATGCACAACGGTAtcaaacatgcatgtgatatttgcggaaataaatttacaaaaaagggTAGTCTCAAAATTCATATCGACTCAATTCACAATGGTGTcagacatgcatgtgatatttgcggtaATAAATTTACAGAAAAGGGTAGTCTCAAAATGCATATGAATGCGATTCACAATGGTGtcaaacatgcatgtgatatttgcggaaagaagttCTCAGATAAAAGTAATGCCAAAAGGCACATTGATACGATGCACAATGGGGCCGCACATGCATGTAAAATATGtcgaaagacattcacacaaaagtttaatctcaaaaaacacatcgatgcgatACACAATGAtgtcacacatgcatgtgatatttgcggaaagaagttCTCAGATAAAAGGAATATTAAAAGGCACATTGATAcgatgcacaatggtgtcacacATAAGTGCGATATGTGCGGACAGTTATTCACTGGAGAGAGTCGTCTCAAAACCCACCTTGAATCAGTTCATCACTCACtgcatttatacataattttaagtGCAAACCCAATCGATGGTCTACGAATACTGGGAATATTTCCGCAAACGTTCCGCAGCCATTTCACCATGAACGAGCGTTTGATGAGAGGATTGGCTGCCAGAGGTCATCGGGTGGACGTTTACAGCCACTATCCGTTGAAGGAACCGATGGAAAATTACACCGATCACAGCATTCGGACGCCCAACATCACGACCTATCTGAATAATTTGCATTACGAGAGGTTGCTGAAGTGGCTGGGCATCGTGGACATGAGTCTGGTTCTGTCGCAGCTCGGCGATCCGGTGTGCGAACTGATGGAGCAGCCGGTTCTCAAAAAGCTCATCGACGATCCACCGAACGATCCTCCTTACGACGTAGTTATCACACAGCCGTACACGGCCAGCTGCTATTTGGCCTTCGGCAGGCGTTTAAATATTCCTCTGGTTACCGTAGAAACTTTGAGCACGACCGATTGGACGTACGCTAGCATGGGAAATCCGCGTAATTTGGCGATCGTACCGAGCGTTTACGGTGGACAAGCCAGTCCTATGTCGTTCGCAGAGaggctgaaaaattttttcatgacttGTTACGTCGAGTAtggatattattatttcgtaaGAAATCAGAATGCTTTGGTCAAGAAGTACTTTGGCGAGGATTATCCCCCGGTAAGCGAGCTGATAAAAGATGTTGATTTGATGCTGATCAATTACAATCACATGCTCAACGGAATTAAACCCTTGACCCCCGCGATAGTACCCGTTGGTGGTCTACATATAGCGGAAACCAACAATAAATTATCCGAGCGAACTCAAAAATTCTTGGATGAGAGCGAAAATGGATTCGTGTACTTTTCGTTCGGCTCGATGGTTCGCATCGAAACTTTCCCAAAACCCATGCTAGAGATGTTTTACAATGCCTTCCGGAAAATTGCACCAACTCGGGTTTTGTGGAAGATTGTCAAACCCGAAGAATTACCAACTGGTCTTCCGGATAATGTTTTGACAGAAACTTGGTTACCACAGATGGAAGTTTTAAAACACAGAAACATCAGAGCTTTTATAACCCACGGTGGTTTGATGGGAACTATGGAAGCCATTTACAACGCAGTGCCAATGATCGGATTTCCCCTATTCTCAGACCAGTACATGAATGTGGATCTGTACAAGAAGAAAGGAGTAGCCATCAAACTCGAATGGTCAAACATAACAAGGGAGTCCTTTGAATTTGCTCTTTTCGAAGTACTAAATAATCCCCTTTACAAaaaggaagcaaaaaaattgagtctATCCTTCAGAGATACGCCAATGAGCCCAATGGACACCGCGGCATATTGGATCGAGTTCGTCGCAAGAAATGGCAAAAAATCGCTCAGATCACCCCTCGTGGATATGCCCTGGTGGCAAGCGTCGCTGCTCGATGTTTACGCAGCGTTTTTGGTCGTTACGATCGTGGCTTTGTATACGGTCAAAATAATTGCGCGGTTATTGATTATTCTCATGACTAAAGTTAAGAGCTATTTCAATAAAACGAAAAGAGATTAA
- Protein Sequence
- MRKMESSGLFSSAIRVKDEPSDALLSENDSEMIDEKPDLKNLQSLSFHQENPTHTLPKCDIKLESELDEKVEIVVECEDVKPNWNSLSDKKMKNYFSNHLRNVKDNNDVYKNQNTIKVEIGKEVKQEFFGDTAEESNSDFDSELDKKNKKGNGTKQSVNGSNGHDSDKHGKTFSRKDVLKRHIVSMHSKITHTCDICGSKFTLRTSLKKHIDTMHNGIRSACDICGNKFTKKASLKIHIDSIHNGVRHACDICGNKFTNKSNLKKHIDAKHDGVKHACDICGKKFSGKRNIRRHIDMMHNGIKHACDICGNKFTKKGSLKIHIDSIHNGVRHACDICGNKFTEKGSLKMHMNAIHNGVKHACDICGKKFSDKSNAKRHIDTMHNGAAHACKICRKTFTQKFNLKKHIDAIHNDVTHACDICGKKFSDKRNIKRHIDTMHNGVTHKCDMCGQLFTGESRLKTHLESVHHSLHLYIILSANPIDGLRILGIFPQTFRSHFTMNERLMRGLAARGHRVDVYSHYPLKEPMENYTDHSIRTPNITTYLNNLHYERLLKWLGIVDMSLVLSQLGDPVCELMEQPVLKKLIDDPPNDPPYDVVITQPYTASCYLAFGRRLNIPLVTVETLSTTDWTYASMGNPRNLAIVPSVYGGQASPMSFAERLKNFFMTCYVEYGYYYFVRNQNALVKKYFGEDYPPVSELIKDVDLMLINYNHMLNGIKPLTPAIVPVGGLHIAETNNKLSERTQKFLDESENGFVYFSFGSMVRIETFPKPMLEMFYNAFRKIAPTRVLWKIVKPEELPTGLPDNVLTETWLPQMEVLKHRNIRAFITHGGLMGTMEAIYNAVPMIGFPLFSDQYMNVDLYKKKGVAIKLEWSNITRESFEFALFEVLNNPLYKKEAKKLSLSFRDTPMSPMDTAAYWIEFVARNGKKSLRSPLVDMPWWQASLLDVYAAFLVVTIVALYTVKIIARLLIILMTKVKSYFNKTKRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01485359; iTF_01484984;
- 90% Identity
- iTF_01485359; iTF_01484984;
- 80% Identity
- iTF_01485359; iTF_01484984;