Tpre003323.1
Basic Information
- Insect
- Trichogramma pretiosum
- Gene Symbol
- UTG2
- Assembly
- GCA_000599845.3
- Location
- NW:90976-95192[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.084 1.4 9.1 0.2 7 23 170 187 170 187 0.93 2 11 0.00055 0.009 15.9 2.2 1 23 192 215 192 215 0.97 3 11 0.00054 0.0088 16.0 0.2 3 23 222 243 221 243 0.95 4 11 1.2e-05 0.0002 21.2 1.4 1 23 248 271 248 271 0.91 5 11 7.1e-05 0.0012 18.7 1.0 1 23 276 299 276 299 0.94 6 11 0.00028 0.0045 16.9 0.6 1 23 304 327 304 327 0.94 7 11 0.00033 0.0053 16.6 0.4 1 23 332 355 332 355 0.94 8 11 2.6e-06 4.2e-05 23.3 1.2 1 23 360 383 360 383 0.95 9 11 1.7e-05 0.00028 20.7 2.5 1 23 388 411 388 411 0.91 10 11 6.8e-06 0.00011 21.9 1.5 1 23 416 439 416 439 0.95 11 11 0.015 0.24 11.4 2.3 1 23 444 467 444 468 0.95
Sequence Information
- Coding Sequence
- ATGAGAAAGATGGAATCTAGTGGTTTATTCAGCTCCGCCATCAGAGTGAAGGACGAGCCTAGTGATGCGCTGCTTAGTGAAAATGATAGTGAAATGATCGACGAAAAACCCgatcttaaaaatttacaatccTTATCATTTCATCAAGAAAATCCTacCCATACACTTCCAAAATGTGACATTAAACTTGAAAGTGAGCTTGATGAGAAAGTGGAAATAGTCGTTGAATGTGAAGATGTCAAACCCAATTGGAATTCATTATCAgataagaaaatgaaaaattatttttcaaatcatttgcGGAATGTAAAAGATAATAACGAtgtttacaaaaatcaaaacacaATTAAAGTAGAAATTGGCAAGGAAGTCAAACAAGAATTTTTTGGTGACACTGCAGAAGAATCGAATTCGGATTTTGATAGTGAACTtgacaagaaaaataaaaaaggaaacggTACCAAACAATCAGTGAATGGTAGTAACGGCCATGATAGTGATAAACatggaaaaacattttcacgaAAAGATGTTCTGAAACGCCACATCGTTTCAATGCATAGTAAAATCACTCAcacatgcgatatatgcgggTCCAAATTCACACTTAGAACTtctctcaaaaaacacatcgatacGATGCATAATGGAATAAGAagtgcatgtgatatttgcggaaataaatttacaaaaaaagctaGTCTCAAAATTCATATCGACTCAATTCACAATGGTGTcagacatgcatgtgatatttgcggaaataaatttacaaacaagagtaatctcaaaaagcacattGATGCGAAGCACGATGGTGtcaaacatgcatgtgatatttgcggaaagaagttCTCAGGTAAAAGGAATATTAGAAGGCACATTGATATGATGCACAACGGTAtcaaacatgcatgtgatatttgcggaaataaatttacaaaaaagggTAGTCTCAAAATTCATATCGACTCAATTCACAATGGTGTcagacatgcatgtgatatttgcggtaATAAATTTACAGAAAAGGGTAGTCTCAAAATGCATATGAATGCGATTCACAATGGTGtcaaacatgcatgtgatatttgcggaaagaagttCTCAGATAAAAGTAATGCCAAAAGGCACATTGATACGATGCACAATGGGGCCGCACATGCATGTAAAATATGtcgaaagacattcacacaaaagtttaatctcaaaaaacacatcgatgcgatACACAATGAtgtcacacatgcatgtgatatttgcggaaagaagttCTCAGATAAAAGGAATATTAAAAGGCACATTGATAcgatgcacaatggtgtcacacATAAGTGCGATATGTGCGGACAGTTATTCACTGGAGAGAGTCGTCTCAAAACCCACCTTGAATCAGTTCATCACTCACtgcatttatacataattttaagtGCAAACCCAATCGATGGTCTACGAATACTGGGAATATTTCCGCAAACGTTCCGCAGCCATTTCACCATGAACGAGCGTTTGATGAGAGGATTGGCTGCCAGAGGTCATCGGGTGGACGTTTACAGCCACTATCCGTTGAAGGAACCGATGGAAAATTACACCGATCACAGCATTCGGACGCCCAACATCACGACCTATCTGAATAATTTGCATTACGAGAGGTTGCTGAAGTGGCTGGGCATCGTGGACATGAGTCTGGTTCTGTCGCAGCTCGGCGATCCGGTGTGCGAACTGATGGAGCAGCCGGTTCTCAAAAAGCTCATCGACGATCCACCGAACGATCCTCCTTACGACGTAGTTATCACACAGCCGTACACGGCCAGCTGCTATTTGGCCTTCGGCAGGCGTTTAAATATTCCTCTGGTTACCGTAGAAACTTTGAGCACGACCGATTGGACGTACGCTAGCATGGGAAATCCGCGTAATTTGGCGATCGTACCGAGCGTTTACGGTGGACAAGCCAGTCCTATGTCGTTCGCAGAGaggctgaaaaattttttcatgacttGTTACGTCGAGTAtggatattattatttcgtaaGAAATCAGAATGCTTTGGTCAAGAAGTACTTTGGCGAGGATTATCCCCCGGTAAGCGAGCTGATAAAAGATGTTGATTTGATGCTGATCAATTACAATCACATGCTCAACGGAATTAAACCCTTGACCCCCGCGATAGTACCCGTTGGTGGTCTACATATAGCGGAAACCAACAATAAATTATCCGAGCGAACTCAAAAATTCTTGGATGAGAGCGAAAATGGATTCGTGTACTTTTCGTTCGGCTCGATGGTTCGCATCGAAACTTTCCCAAAACCCATGCTAGAGATGTTTTACAATGCCTTCCGGAAAATTGCACCAACTCGGGTTTTGTGGAAGATTGTCAAACCCGAAGAATTACCAACTGGTCTTCCGGATAATGTTTTGACAGAAACTTGGTTACCACAGATGGAAGTTTTAAAACACAGAAACATCAGAGCTTTTATAACCCACGGTGGTTTGATGGGAACTATGGAAGCCATTTACAACGCAGTGCCAATGATCGGATTTCCCCTATTCTCAGACCAGTACATGAATGTGGATCTGTACAAGAAGAAAGGAGTAGCCATCAAACTCGAATGGTCAAACATAACAAGGGAGTCCTTTGAATTTGCTCTTTTCGAAGTACTAAATAATCCCCTTTACAAaaaggaagcaaaaaaattgagtctATCCTTCAGAGATACGCCAATGAGCCCAATGGACACCGCGGCATATTGGATCGAGTTCGTCGCAAGAAATGGCAAAAAATCGCTCAGATCACCCCTCGTGGATATGCCCTGGTGGCAAGCGTCGCTGCTCGATGTTTACGCAGCGTTTTTGGTCGTTACGATCGTGGCTTTGTATACGGTCAAAATAATTGCGCGGTTATTGATTATTCTCATGACTAAAGTTAAGAGCTATTTCAATAAAACGAAAAGAGATTAA
- Protein Sequence
- MRKMESSGLFSSAIRVKDEPSDALLSENDSEMIDEKPDLKNLQSLSFHQENPTHTLPKCDIKLESELDEKVEIVVECEDVKPNWNSLSDKKMKNYFSNHLRNVKDNNDVYKNQNTIKVEIGKEVKQEFFGDTAEESNSDFDSELDKKNKKGNGTKQSVNGSNGHDSDKHGKTFSRKDVLKRHIVSMHSKITHTCDICGSKFTLRTSLKKHIDTMHNGIRSACDICGNKFTKKASLKIHIDSIHNGVRHACDICGNKFTNKSNLKKHIDAKHDGVKHACDICGKKFSGKRNIRRHIDMMHNGIKHACDICGNKFTKKGSLKIHIDSIHNGVRHACDICGNKFTEKGSLKMHMNAIHNGVKHACDICGKKFSDKSNAKRHIDTMHNGAAHACKICRKTFTQKFNLKKHIDAIHNDVTHACDICGKKFSDKRNIKRHIDTMHNGVTHKCDMCGQLFTGESRLKTHLESVHHSLHLYIILSANPIDGLRILGIFPQTFRSHFTMNERLMRGLAARGHRVDVYSHYPLKEPMENYTDHSIRTPNITTYLNNLHYERLLKWLGIVDMSLVLSQLGDPVCELMEQPVLKKLIDDPPNDPPYDVVITQPYTASCYLAFGRRLNIPLVTVETLSTTDWTYASMGNPRNLAIVPSVYGGQASPMSFAERLKNFFMTCYVEYGYYYFVRNQNALVKKYFGEDYPPVSELIKDVDLMLINYNHMLNGIKPLTPAIVPVGGLHIAETNNKLSERTQKFLDESENGFVYFSFGSMVRIETFPKPMLEMFYNAFRKIAPTRVLWKIVKPEELPTGLPDNVLTETWLPQMEVLKHRNIRAFITHGGLMGTMEAIYNAVPMIGFPLFSDQYMNVDLYKKKGVAIKLEWSNITRESFEFALFEVLNNPLYKKEAKKLSLSFRDTPMSPMDTAAYWIEFVARNGKKSLRSPLVDMPWWQASLLDVYAAFLVVTIVALYTVKIIARLLIILMTKVKSYFNKTKRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01485838;
- 90% Identity
- iTF_01485838;
- 80% Identity
- iTF_01485838;