Tpre003065.1
Basic Information
- Insect
- Trichogramma pretiosum
- Gene Symbol
- -
- Assembly
- GCA_000599845.3
- Location
- NW:990110-992866[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.065 4.8 6.8 0.5 16 43 71 95 66 96 0.91 2 15 0.00044 0.033 13.7 2.7 14 44 126 153 119 153 0.89 3 15 0.0034 0.25 10.9 0.8 10 44 179 209 176 209 0.87 4 15 0.012 0.92 9.1 0.1 14 40 248 271 242 274 0.87 5 15 0.022 1.6 8.3 0.3 17 44 307 331 299 331 0.87 6 15 0.28 21 4.7 2.2 17 43 372 395 365 396 0.88 7 15 0.015 1.1 8.8 2.3 3 44 387 424 385 424 0.89 8 15 0.013 1 9.0 1.7 19 44 431 453 428 453 0.93 9 15 0.043 3.2 7.3 0.6 14 40 454 477 453 481 0.73 10 15 5.1 3.8e+02 0.7 1.4 17 43 486 509 480 510 0.75 11 15 0.99 73 3.0 1.7 6 26 504 524 498 538 0.84 12 15 0.0083 0.62 9.6 6.4 15 44 543 569 529 569 0.89 13 15 1 75 3.0 0.4 18 29 575 586 572 592 0.84 14 15 0.034 2.6 7.7 2.4 6 40 592 623 586 626 0.77 15 15 0.047 3.5 7.2 8.0 3 44 618 656 616 656 0.91
Sequence Information
- Coding Sequence
- ATGGAAATTTGTAAAGTTAAAACTGAAATTTGTGAGCCTGAGTTTGTTGCAGTAAAAATGGAATATGACATGGACGgctataatgaaaatgaaactgATTGTTTGAATAACGATAGCCTTCAAAGTGCAGATGAACATTTAAGAAATGAGATAAATGTAATTGATTCATTAGCAATTGATGAACCACAACAACAAGTTCATGGAAAAAGTTTGGTACAATGTGATCAATGTAACAAACTATTTGATAGAAAATATAACTTAAGGCGACATGTTACCCAGGTTCATGAAGCTAAAAAAGTAGATGTAAGAGTGATAACTGAGAATAacatgattaattttataataattaaagaacctcaacataaaattgatgaaaaaagagtAGTTCAGTGCGATCAGTGTAacaaactatttaaaaataaatcttgctTAAGGCGTCATGTCAGAGAAGttcataaaagtaaaaaattagttaaaagtataataacaGATAATGCGATTAATTCTACAATTATTAATGATACACTACGTATAGCTCCTAAAAGAACTGTGTTACAATGCAATCAATGTAACAAGTTATTTGATAGAAACTATAATTTAAGACGACATATTGCTATGGTTCATAAGAGTAATGAACAAGATGAAAGCATAATAACTAAGGAAGCAGATGGAAGTATAATTACTGAAGATAATGCAATGAATTCTATATCACTTAATGAATCACAAGATAATTTTGCCGAACAAAGTGTGTTACAATGTGATCAATGTAACAAACTGTTTAATAGATCCTATAATTTGAAGCGTCATATGCAGGTTCATGAAGCTAAAAAAGTGGATGAAAGTATAATAACTAAAGATAATGTAATCAAGTCTATAACAATTAATGAGACTCAAGATAAAGTTGATAAAGTAAGTGCATTACAATGCAATCAGTGTAACAAACTATTtaaaagcaacagcagcttaAGGAGACATGTCACAGAGGTTcataagaataaaaaacaaaatgaaggTATAACTGAGAAAGCAGATGAAAGTATCATAACTGAAGATAATGCAATTAATTCTATAAGAAGCATAGAAGAGCAAAACGAAGTGGATGAAAAAAGCTTGTTTGAGTGCAATCAATGTaacaaactttttcaaaacaacTATAGATTAAAGCGACATGTCACCCGGGTtcatgagagaaaaaaagtggaatGTGAAGTTTGTCATgagttttttgcaaaaaagtcAAATCTATTAGTTCATTATGATTCAGTTCATCCTGGTTTTATGACACACTCCTGCAATGAATGTTCAAAGACATTTgataagagaaaaaacttGTTGAGGCATATTAGAAGTGTTCATCGAAATACTGTTTTTGAATGTGCTATATGTCAAAAAACctttacaaataaaacatACTTACGATTACACATTACTGGTACACATGAACAAGTTAAGGGTGTTGAGTGTGatacatgtaaaaaaacattcagACATAAGACTTACTTAAGAATCCATATTGATGCAGTTCATAAACGTCTCAGAAATTTTGAGTGTCCTATTTGTCATAAAGTTTATGGTTTTGAAGGTTACCTTAAAAAGCACATCAAAGGCATTCATGGaactataattaaaaatcatgagtgtgaaatatgtaaaaaaaagtttagtcATAAAAGCAACTTAACGAAACATGTTGATAGATCTCATAAAAACATTCGtgcctttgaatgtgaaatttgccatGCGACTTTTAAACAAAAAGCTCACAAGCTTGTACATATTGATACTGTGcacgagcaaaagaaaaactttttttgcgaGTATTGTGGCAAAAATTTTGGACGAAAAGATAATATGCTTATGCAcgttaaaattgttcatttgaAACTTAAAAAACATGAGTGTCAAATATGTAAAAAGACATTTAGAGATAGACATTATTTAACTAAGCACATGAACACAGTGCATAAAGACATTGTGAAAGACATAACTATTGATTttagaaataatgaaaaagaaaatactgctgatattagttaa
- Protein Sequence
- MEICKVKTEICEPEFVAVKMEYDMDGYNENETDCLNNDSLQSADEHLRNEINVIDSLAIDEPQQQVHGKSLVQCDQCNKLFDRKYNLRRHVTQVHEAKKVDVRVITENNMINFIIIKEPQHKIDEKRVVQCDQCNKLFKNKSCLRRHVREVHKSKKLVKSIITDNAINSTIINDTLRIAPKRTVLQCNQCNKLFDRNYNLRRHIAMVHKSNEQDESIITKEADGSIITEDNAMNSISLNESQDNFAEQSVLQCDQCNKLFNRSYNLKRHMQVHEAKKVDESIITKDNVIKSITINETQDKVDKVSALQCNQCNKLFKSNSSLRRHVTEVHKNKKQNEGITEKADESIITEDNAINSIRSIEEQNEVDEKSLFECNQCNKLFQNNYRLKRHVTRVHERKKVECEVCHEFFAKKSNLLVHYDSVHPGFMTHSCNECSKTFDKRKNLLRHIRSVHRNTVFECAICQKTFTNKTYLRLHITGTHEQVKGVECDTCKKTFRHKTYLRIHIDAVHKRLRNFECPICHKVYGFEGYLKKHIKGIHGTIIKNHECEICKKKFSHKSNLTKHVDRSHKNIRAFECEICHATFKQKAHKLVHIDTVHEQKKNFFCEYCGKNFGRKDNMLMHVKIVHLKLKKHECQICKKTFRDRHYLTKHMNTVHKDIVKDITIDFRNNEKENTADIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01485128; iTF_01482723; iTF_01482849;
- 90% Identity
- iTF_01485128; iTF_01482723; iTF_01482849;
- 80% Identity
- iTF_01485128;