Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000001.1:4889807-4891852[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.018 3.5 8.5 0.9 18 43 73 95 67 96 0.91

2 15 0.00032 0.063 14.1 3.1 13 44 125 153 119 153 0.88

3 15 0.0084 1.7 9.5 2.9 13 44 182 210 178 210 0.91

4 15 0.024 4.8 8.1 0.1 14 43 249 275 239 276 0.86

5 15 0.5 99 3.9 1.2 17 44 309 333 301 333 0.82

6 15 0.44 87 4.0 2.1 17 43 375 398 370 399 0.89

7 15 0.018 3.6 8.5 1.8 3 44 390 427 389 427 0.87

8 15 0.054 11 7.0 1.0 19 44 434 456 431 456 0.93

9 15 0.0016 0.32 11.8 3.4 2 40 446 480 445 484 0.80

10 15 8.3 1.6e+03 -0.0 2.5 16 43 488 512 478 513 0.75

11 15 0.89 1.8e+02 3.1 1.5 6 26 507 527 503 541 0.84

12 15 0.0072 1.4 9.8 6.3 15 44 546 572 532 572 0.89

13 15 0.93 1.8e+02 3.0 0.4 18 29 578 589 575 595 0.84

14 15 0.0058 1.1 10.0 1.8 6 43 595 629 590 629 0.82

15 15 0.059 12 6.8 7.5 2 44 620 659 619 659 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.018	3.5	8.5	0.9	18	43	73	95	67	96	0.91
2	15	0.00032	0.063	14.1	3.1	13	44	125	153	119	153	0.88
3	15	0.0084	1.7	9.5	2.9	13	44	182	210	178	210	0.91
4	15	0.024	4.8	8.1	0.1	14	43	249	275	239	276	0.86
5	15	0.5	99	3.9	1.2	17	44	309	333	301	333	0.82
6	15	0.44	87	4.0	2.1	17	43	375	398	370	399	0.89
7	15	0.018	3.6	8.5	1.8	3	44	390	427	389	427	0.87
8	15	0.054	11	7.0	1.0	19	44	434	456	431	456	0.93
9	15	0.0016	0.32	11.8	3.4	2	40	446	480	445	484	0.80
10	15	8.3	1.6e+03	-0.0	2.5	16	43	488	512	478	513	0.75
11	15	0.89	1.8e+02	3.1	1.5	6	26	507	527	503	541	0.84
12	15	0.0072	1.4	9.8	6.3	15	44	546	572	532	572	0.89
13	15	0.93	1.8e+02	3.0	0.4	18	29	578	589	575	595	0.84
14	15	0.0058	1.1	10.0	1.8	6	43	595	629	590	629	0.82
15	15	0.059	12	6.8	7.5	2	44	620	659	619	659	0.91

Sequence Information

Coding Sequence: ATGGAAATTTGTAAAGTTAAAACTGAAATTTGTGAACCTGAGTTTGTTGCAGTAAAAATGGAATGTGACATGGATGgctataatgaaaatgaaactgaTTGTTTGAATAACGATAGCCTTCAAAGTGCAGATGAACATTTAACAAATGAGATAAGTGTAATTGATTCATTAGCAATTGATGAACCACAACAACAAGTTCATGGAAAAAGTTTGTTACAATGTGATCAATGTAACAAACAATTTGATAGAAAATATAACTTAAGGCGACATGTTACCCAGGTTCATGAAGTTAAAAAAGTGGATGTCAGAGTGATAACTGAGAATAAcatgattaattttataataattaaagaacctcaacataaaattgatgaaaaaaaaatagttcagtGCGATCAGTGTAacaaactatttaaaaataaatcttgcTTAAGGCGTCATGTCAGAGAAGTTCATAGAAGTAAAAAACTAGTTAGATGTATAATGACAGATGATAATGCAATTAATTctacaattattattgatgcACTATGTAAAGCTCCTAGAAGAACTGTGTTACAATGCAATCAATGTAACAAGTTGTTTGATAGAAACTATAATTTAAGACGACATATTGCTAAGGTTCATAAGAGTAATGAACAAGATGAAAGCATAATAACTAAGGAAGCAGATGGAAGTATAATTACTGAGGATAATGCAATGAATTCTATATCATTTAATGAATCACAAGATAATTTTGCTGAACAAAGTGTGTTACAATGTGATCAATGTAACAAACTGTTTAATAgatcttttaatttaaagCGTCATGTTATGCAGGTTCatgaagctaaaaaagtgGATGAAAGTATAATAACTGAAGATAATGTAATCAAGTCTATAACAATTAATGAAACTCAAGATAAAGTTGATAAAGTTAGTGCATTACAATGCAATCAGTGTAACAAACTATTTAAAAGCAATTGCAGCTTAAGGAGACATGTCACAGAGGTTCATaggaataaaaaacaaaatgaaagtATAATAACTAAGAAAGCAGATGAAAGTATCATAACTGAAGATAATGCAATTAATTCTATAAGAAGCCAAGAAGAGCAAGAAGAAGGGGATGAAAAAAGCTTGTTTGAGTGCAATCAATGTaacaaactttttcaaaacaacTATAGATTAAAGCGACATGTCATCCGGGTTCATGAGAGTAAAAAAGTGGAATGTGAAGTTTGTCATgagttttttgcaaaaaaatcaaacctATTAGTTCATTATGATTCAGTTCATCCTGGTTTTATGACACACTCCTGCAATGAATGTTCAAAGATATTTGATAAGAGAAAAAACTTGTTGAGACATTTTAGAAGTGTTCATCGAAATACTGTTTTTGAATGTGCTATATGTCAAAAAACCTTTACAAATAAAACATACTTACGATTACACATTACTGGTACACATGAACAAGTTAAGGGGGTTGAGTGTGATACatgtaaaaaaacattcagACATAAGACTTACTTAAGAATCCATATTGATGCAGTTCATAAACGTCTCAGAAATTTTGAGTGTCCTATTTGTCATAAAGTTTATGGTTTTGAAGGTTACCTAAAAAAGCACATCAAAGGCATTCATGgaactataattaaaaatcatgagtgtgaaatatgtaaaaaaaagttcagtcATAAAAGCAACTTAACGAAACATGTTGATAGATCTCATAAAAACATTCGTgcttttgaatgtgaaatttgccaTGCGACTTTTAAACAAAAAGCTCACAAGCTTGTACATATTGATACTGTGCACgagcaaaataaaaacttttcttgCGAGTATTGTGGCAAAAATTTTGGACGAAAAGATAATATGCTTATGCACGTTAGAATTGTTCatttaaaacttaaaaaacaTGAGTGTCAAGTATGTAAAAAGACATTTAGAGATAGACATTATTTAACTAAGCACATGAACACAGTGCATAAAGACATTGTGAAAGACATTACTATTGATTttagaaataatgaaaaagaaaatactgCTGATAttagttaa
Protein Sequence: MEICKVKTEICEPEFVAVKMECDMDGYNENETDCLNNDSLQSADEHLTNEISVIDSLAIDEPQQQVHGKSLLQCDQCNKQFDRKYNLRRHVTQVHEVKKVDVRVITENNMINFIIIKEPQHKIDEKKIVQCDQCNKLFKNKSCLRRHVREVHRSKKLVRCIMTDDNAINSTIIIDALCKAPRRTVLQCNQCNKLFDRNYNLRRHIAKVHKSNEQDESIITKEADGSIITEDNAMNSISFNESQDNFAEQSVLQCDQCNKLFNRSFNLKRHVMQVHEAKKVDESIITEDNVIKSITINETQDKVDKVSALQCNQCNKLFKSNCSLRRHVTEVHRNKKQNESIITKKADESIITEDNAINSIRSQEEQEEGDEKSLFECNQCNKLFQNNYRLKRHVIRVHESKKVECEVCHEFFAKKSNLLVHYDSVHPGFMTHSCNECSKIFDKRKNLLRHFRSVHRNTVFECAICQKTFTNKTYLRLHITGTHEQVKGVECDTCKKTFRHKTYLRIHIDAVHKRLRNFECPICHKVYGFEGYLKKHIKGIHGTIIKNHECEICKKKFSHKSNLTKHVDRSHKNIRAFECEICHATFKQKAHKLVHIDTVHEQNKNFSCEYCGKNFGRKDNMLMHVRIVHLKLKKHECQVCKKTFRDRHYLTKHMNTVHKDIVKDITIDFRNNEKENTADIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01484906;
90% Identity: iTF_01484906;
80% Identity: iTF_01482849;