Basic Information

Gene Symbol
ZFX
Assembly
GCA_902732785.1
Location
CACVKI010140595.1:29940-34735[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 6.9 5.8e+02 1.4 0.0 3 23 23 43 22 43 0.93
2 14 0.67 56 4.6 3.2 1 23 956 979 956 979 0.87
3 14 0.004 0.33 11.6 0.1 2 23 1095 1116 1095 1116 0.98
4 14 1.9e-05 0.0016 18.9 2.2 2 23 1119 1140 1118 1140 0.97
5 14 0.0052 0.44 11.2 0.5 1 23 1146 1168 1146 1168 0.97
6 14 2.6e-05 0.0022 18.5 4.5 2 23 1175 1196 1174 1197 0.95
7 14 0.12 9.7 7.0 3.7 5 23 1210 1228 1209 1228 0.97
8 14 0.00053 0.045 14.3 5.0 3 23 1235 1256 1234 1256 0.96
9 14 0.016 1.4 9.7 0.8 2 23 1272 1292 1271 1292 0.97
10 14 4.3e-05 0.0037 17.8 1.2 1 20 1298 1317 1298 1320 0.92
11 14 1.4e-05 0.0012 19.3 1.1 1 23 1328 1350 1328 1350 0.99
12 14 0.012 1 10.0 3.4 1 23 1356 1378 1356 1378 0.97
13 14 2.2e-06 0.00019 21.8 4.3 1 23 1384 1406 1384 1406 0.99
14 14 0.00032 0.027 15.0 7.2 1 23 1412 1434 1412 1435 0.96

Sequence Information

Coding Sequence
atggaTCTCACTAGAGCTGTAAGCACAATGGCAACTAATCCTTCATCAGGAAATGGAAAAGTGGCGTGTCCCGTCTGTACCTTATACCTTCGAGAAGGTATAAGTTTACAGGAACATTTGGATACTCATCCAAAAGAACAAGTTATTGAGGCACTCATAAGAGCAAGTAGTTCTGGTTTACCATTATTGAGCCAGCAAACGCCATCACctttacaacaaaaaagttcTCCAACATCTCAAGCATCACAAACAGCATTGCCTGATGTCAGTGTACCAACAGTATCACAAGGTCCACATATAACACCTCAACATCCATCAGCGCCTTACCCAGTAGGACCAATATATGAATGCCCACCTATGATACCCCCACATTTTACAAGCTACAGTTATCAACATTATGTTAATGGTGGTGCAAGTCCCATGGTGATGCCTCAGTATGCTGTAGCTCAACCACAAAATCCACAAACAAGTCAGATGATGCAGATGGTATATAATCCATTTAGTATGTATCATCAACAATTGCAGCCTGCAGTGCAAATGATTTCAAGCCCAACGCAACAGTTACCTCATCCTTCAACACTTACAACACCTCTGATATCTACAACATCAACAGCAACTACAGCTGTTTCAGCCCCAATCTCAGCTAGTATAGCTCCCAGGACAAGGATGAACCCACCAACTAGTAGTGCTTGTATAAGTGAAGTTATTCAACCAACTTCTACTTTAGCTATATCAGAGTCAACACCAAGATGCTTAGATAAACCAAAAGAAACTACAATTGTTCCAGATATCAGCAATGAACAAATATTACCAGATCTCGAAGTTACTTCAGCATCTGAAACCAACTCTAAAAaccaagaacacaatgaaaatattgagaatCCAGAAGAACAAGTTCAACGTAAAGAGTGTTCGCAACCAAAAGAATGTCACAACGAAAATTATGAATGTGAGGAGCAAACTTCATCTACGAACGATAAACTAGAGAATACCGTAAACGATGATAAAACCGAACGAATCCTTCCTGATATTGAAGACAATGATGAAATTGAATCACTTTTGGTTCGGGAAACTTCTTCACCACAAAACGAAACTGATAAAAATTCTGATGTACAAATGCGTGAACCTCGAGAAGTGCAGGATACAAATATAGAAGTCACACAGATTGAAATAAATagcgataaaaatgtttcgaaATCATCTGAATTGAatggtgaaaaaataaatgaaactaATACTTCAGCTGAATCTGTCGAGCAACAGCTCAATAATGGTATGCAACCGACAGATCTTTCAATCGGCGAATCACGTTCTACTCAAAAGCAACCTGATATCGAAGATTTGCACCGGATCATGGAAATAATCTCAGATCTAGAAAAGAAAAGCCACGTCTTACAATCTGCGTTACCTAAAAGCACCGATGatatttgtttacaaaatagTTCCGAAAAACATTCGGACGCAGCCTCCTCCTCACATAAACAACAGATCGATGAAGATGAAAACGTGAGCAATGTTGAACCAATGGAATGTAAGATAATAGTCGCCCATGAAGACACAGATATGTCTTCTGATGCCTCGAACGATTCATCAATTTGTATAACGTCATCCGAACAGTTATTCGAAAAAGTGTATCATTACAAATTGTCCAAGTCGAATCCATCTTCTCCTGTAAACCCGCCCGCAATAAAATATCGATCCCTTTCGAGAGCTTCATTACATTCGcctgaaaaattaaacgaaaCTCTTGGCAATCAACATCTCAATAATGAGGCCAGCTGTGCCCAAAATTATCTCAAAGATAATTACAACGACGAGGATATGGAATTAGAAGTCAGTAATGGAGTCATTATTGAGCGAGAATCCCTCAAAGCTCGGCGCACCAAACCCGCTGAATCTCCTATGTTATACAACGAAGAGGAATATGAAGAAGAGGAAGACGACTCGGATGCGGATAGTTGCGAAGATGTGGGTAAAAATGAGgaagacgacgatgaagatgaagatgaagatgaagatgaagaggatgaagaagacgaagaagatgaagaagaagagcatATAGTTCATGGAGATAATGCGCTGATGGAAAAAGATCctaataaatttgataatcAGTCATCTGTTTTTGTACCTATCGAAGAACAAGAACGAGCTACTGATCTTAGGGCACATAATGGCATTTCTGAAAGCTTTGGAACATCGAGTAACTTCTCTGTTGACCAAAATTTGCGAAAACTATCATCAGAAATGAGTGTTCTCCGTAACTATCCAATACTATCTAAAAACGAAAATGCTTTGAGTACATCCGATTCTATTGTAAGTGCGGATACCAGAATTATTTCTAGTTCTAACAAGGTATCTGCTCCAAAATCGTCATCAGAACTATTAAACATGAATGAGAATGCTCATGCTGGGCCTATCAATTTGTTTGAATACGACAGTCTTCGTTTACTTTTACCTAGTACATTGGACTGTGAATCTTCTCAGAAAGCCGTAAGTGTCACGAGTCAACAATCATTGGCAAGCAGCGAAAACGAAGTTGGTGTTGATGAGGAGGTCAAAAGTGTAAATATGAGAGCTGATGAAACAATGCCTGCAAGAGGTGAACTATCTGAACAGGAAAGCAATGGCTTTACAGAACAATCAGCGTGGCAGTATGTGGGTCAAGATTCATCGCGTATGTCGACGTCATATGATTTGATGGCTCGAGAAAGCTGGGAAGAATCCGAGGGTTCAGATCGCGACGATAACAATGCTTCAGAGCAGAATCATAATCTTCTTCTCGACAGCCGATCAATGGCCACGCATTTTACTTCAAGTCTCTTTCTTGATCGAGATAGAAAAACTCCAACAAGAGGAGTATTCAAATGCTCTCATTGCCCAGAAGTATTTGATTGTCCAAAAGAACGTCGAGTTCACACCACTATGCTTCACAAAGAGGCGATTCCATCTAGTAGCTGTAGTAGCAGTACTGAAGCAATTACATTGACACATACAATTCAAAGTCAGCATCACGAGTTCAAAGATCTGAAGCACGTGGAAGCTCGAACAAATagttttgaagaaatttttgtacaaacCGGTCATCCGTCACCACTTCTTCATGAAATGGAGACAGTTCGTCAGCGAGATCCCAATGCAGTTGATAATGATATGATTAAATTTGATCTGGCAAGACAAGGACACAAAACTTTTGCTGGTGACAAAGCTCTCATGCTCCAGCGTGAAAAAGTTCAAATGATGGTACCGCCTGCCAAGCGTGCACCACGTGAAGTAGCCAAGTGTCTGATTTGCAACGAAGAGTTTCCATCAGTTGGTAATTATAATCtccatttgaaaattcatccTTTGGAGTGTGGCCAAtgtggtaaatatttttatcgaaagcAAAACTTTAGATTACACATGAAAAGACACATGGGTATCAAGCCATTCCCTTGTACGCGTTGCGACAAAGCTTTCCTCACAAAGCAAAAGTTAGATGAGCACATGAACGGACATACTGGTAACGCACCCGTAAAGTGCAATCTTTGCAATGAAACGTTCCGGCGATACTCTAACTTGACTCAACATAAGAATCGCCATCACCTAaacattaagaaaaaattaaaggattACATTTGTCATTGCGGCGAAGTTTTTCATACGAAGAAAAAACTCGCTTGGCATAAAGAAACTCACGATGAAAAACCCAAAGCATGTACCCATTGTAATGAAAGATTTGTTCATATGGCCAGCTTAACACGGCATATGCGACACGCTCACAATCGTCGCTTTGTTCCGGATGCTCAACGAGAAAATGAAAACGTTGAATGTCCGGTATGCCATTGTATATACCTTCGCTCGTCGTTAGCTGTACACATGCGGGTTCATAATGGAGAAAAACCTTACGAATGTCAAGTTTGTTCTAAGACATTCAGCACAAAATGGAATCTTCAACTCCACAAGTGGACTCATGCAGCCCGCAGTGCCAAACCATTCAAGTGTAATCAGTGCAGCGCCGCATTTTACCGAAACAGTGATTACACAGCTCACATGAATTCTCATCGTAACGTACGGCCTTATACATGCAATTTTTGTGGAGCTCAGTTTATCCGTAAGTACAATTGTTTGCGGCACGTTAAAGAGCACGAAGAAGACAAGCAGTATACCTGTGAAATATGTAACAAAACCTTTCACCGCTCGTATTATCTCAAAGAACATCAGCGCGTGCATTCGGGCCTTAGACCCTATACTTGTCACATATGTGGTAAATCAAGCAGCACTAAATCTAATCACAATAAGCATGTTAGAATACATCATGCCCGTGAACCAGTTAACACggaaaattaa
Protein Sequence
MDLTRAVSTMATNPSSGNGKVACPVCTLYLREGISLQEHLDTHPKEQVIEALIRASSSGLPLLSQQTPSPLQQKSSPTSQASQTALPDVSVPTVSQGPHITPQHPSAPYPVGPIYECPPMIPPHFTSYSYQHYVNGGASPMVMPQYAVAQPQNPQTSQMMQMVYNPFSMYHQQLQPAVQMISSPTQQLPHPSTLTTPLISTTSTATTAVSAPISASIAPRTRMNPPTSSACISEVIQPTSTLAISESTPRCLDKPKETTIVPDISNEQILPDLEVTSASETNSKNQEHNENIENPEEQVQRKECSQPKECHNENYECEEQTSSTNDKLENTVNDDKTERILPDIEDNDEIESLLVRETSSPQNETDKNSDVQMREPREVQDTNIEVTQIEINSDKNVSKSSELNGEKINETNTSAESVEQQLNNGMQPTDLSIGESRSTQKQPDIEDLHRIMEIISDLEKKSHVLQSALPKSTDDICLQNSSEKHSDAASSSHKQQIDEDENVSNVEPMECKIIVAHEDTDMSSDASNDSSICITSSEQLFEKVYHYKLSKSNPSSPVNPPAIKYRSLSRASLHSPEKLNETLGNQHLNNEASCAQNYLKDNYNDEDMELEVSNGVIIERESLKARRTKPAESPMLYNEEEYEEEEDDSDADSCEDVGKNEEDDDEDEDEDEDEEDEEDEEDEEEEHIVHGDNALMEKDPNKFDNQSSVFVPIEEQERATDLRAHNGISESFGTSSNFSVDQNLRKLSSEMSVLRNYPILSKNENALSTSDSIVSADTRIISSSNKVSAPKSSSELLNMNENAHAGPINLFEYDSLRLLLPSTLDCESSQKAVSVTSQQSLASSENEVGVDEEVKSVNMRADETMPARGELSEQESNGFTEQSAWQYVGQDSSRMSTSYDLMARESWEESEGSDRDDNNASEQNHNLLLDSRSMATHFTSSLFLDRDRKTPTRGVFKCSHCPEVFDCPKERRVHTTMLHKEAIPSSSCSSSTEAITLTHTIQSQHHEFKDLKHVEARTNSFEEIFVQTGHPSPLLHEMETVRQRDPNAVDNDMIKFDLARQGHKTFAGDKALMLQREKVQMMVPPAKRAPREVAKCLICNEEFPSVGNYNLHLKIHPLECGQCGKYFYRKQNFRLHMKRHMGIKPFPCTRCDKAFLTKQKLDEHMNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTHCNERFVHMASLTRHMRHAHNRRFVPDAQRENENVECPVCHCIYLRSSLAVHMRVHNGEKPYECQVCSKTFSTKWNLQLHKWTHAARSAKPFKCNQCSAAFYRNSDYTAHMNSHRNVRPYTCNFCGAQFIRKYNCLRHVKEHEEDKQYTCEICNKTFHRSYYLKEHQRVHSGLRPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01485495;
90% Identity
iTF_01483073;
80% Identity
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