Tden015757.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000069.1:501710-503380[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.5 3e+02 2.3 0.8 19 37 172 183 169 198 0.79 2 12 0.0096 1.9 9.4 0.2 19 44 200 222 194 222 0.93 3 12 0.059 12 6.8 0.2 19 43 228 249 225 250 0.89 4 12 0.0033 0.64 10.9 0.9 19 43 256 277 252 278 0.94 5 12 0.00067 0.13 13.1 1.2 17 44 282 306 279 306 0.94 6 12 0.014 2.8 8.8 1.5 19 44 312 334 309 334 0.93 7 12 0.00082 0.16 12.8 0.9 18 43 339 361 335 362 0.89 8 12 0.00049 0.097 13.5 0.5 19 44 368 390 364 390 0.94 9 12 2.6 5.2e+02 1.5 0.2 18 29 395 406 393 418 0.69 10 12 0.0032 0.63 10.9 1.1 19 44 424 446 422 446 0.91 11 12 0.042 8.2 7.3 1.2 19 44 452 474 449 474 0.92 12 12 0.28 55 4.7 0.8 19 44 480 502 477 502 0.90
Sequence Information
- Coding Sequence
- ATGAGATTACCAACGAGTAAGATGGAATCGAGCAACGTATTCAATACTGCTGTTAGagtgaaaaaagagcCTCGTGATGAGCCTCTCAGTGATGATAATgattacaaaataattgacGCGACACCCGttactcaaaatttaaaatacgaGATGTTTCGGCGAGAAAATTCGATGCTTCAAGAATATGAcgtaaatcaaaaaattgtacttgACGACATTCAAATCGAGTTGGAATGTACAGACATGAAGCCCAACTTATTGTCAATGGTGAAAATCGAAGATTATTCTCCAAATCAATGTCAGGATAGCCTTGATTATAAAACCGGAAGCACAATTAAATTAGAAACTGTCGGGATGttgaagaaagaaatttttggCGAAGAAGCCGCTGAATTGAATTGTGGACGTGGACTCAGTGAACAAAATAAACAAGGAACTGTTTCCAAAGAGCTTAACTATGAACATAGGCTAAAAACTCACATTGATACTACGCATTATGGAATcacacatgcatgtgatatttgcggaaaatcATTCAGATATAAGAGTCATCTCCAAAGAAACATCGATTCGTTACATCGTAAAATCACGCATCCATGcgatatatgccaaaagacGTTCACACAAAAAggtaatctcaaaactcacatcgattcggtgcataatggtgTCACATATGCGTGTGATATTTGCGGGAATGTATTCAATCGTAAAGATGATCTCAATAGACATATCGATTCAGTGCATCATAAAATAAGGTATGGATGTGATATGtgccaaaagacattctcagACAAGAGTAATCTTAGAAagcacatcgattcggtgcatcaTAAAATTACGAATACTTGTAATAAATGCCCAAAGACATTCTCAGAAAAGAGTCGTCTCAAAAagcacatcgattcggtgcacaaAGGTGTTAGACATGCATGTGACATTTGCGGGAAGAATTTCACACAAAAAAGTATTCTCAATAGACACATCGAATCGGTGCATAATAAAGTTAGATatacatgtgatatatgtAAAAAGACATTCTCATACAAGAGTactctcaaaaaacacatcgattaCGAGCATAATGGTGTCAggcatgcatgtgatatatgccaaaagacattctcagacaagagtaatctcaaaactcacatcgatTCAGTGCACAATGGAATCGTCTTCGCATGTGACGTATgcgaaaagacattcacaACAAAGTATTATCTCCAAAACCATATCAACGCAGTGCACAATGGAATCGGCTTCGCATGTGACGTATGCGGAAAGAATTACACACGTAAAAATCATCTCAAAAGGCATATGGATGCGGAGCACAATGGAATCACCCACGCATGTGAtttctgtgaaaaaaaattcaaatatcaaACTCAACTTTATAAGCATGTCAAATCGTCTCATAATGGTATCATACATTCATGCGAGACATGCGGAAAGACATTTGGACAGAAAAGAAATCTCAGAGCTCACATCGATGTGGCGCATCGCTCACTCAATATGAcctaa
- Protein Sequence
- MRLPTSKMESSNVFNTAVRVKKEPRDEPLSDDNDYKIIDATPVTQNLKYEMFRRENSMLQEYDVNQKIVLDDIQIELECTDMKPNLLSMVKIEDYSPNQCQDSLDYKTGSTIKLETVGMLKKEIFGEEAAELNCGRGLSEQNKQGTVSKELNYEHRLKTHIDTTHYGITHACDICGKSFRYKSHLQRNIDSLHRKITHPCDICQKTFTQKGNLKTHIDSVHNGVTYACDICGNVFNRKDDLNRHIDSVHHKIRYGCDMCQKTFSDKSNLRKHIDSVHHKITNTCNKCPKTFSEKSRLKKHIDSVHKGVRHACDICGKNFTQKSILNRHIESVHNKVRYTCDICKKTFSYKSTLKKHIDYEHNGVRHACDICQKTFSDKSNLKTHIDSVHNGIVFACDVCEKTFTTKYYLQNHINAVHNGIGFACDVCGKNYTRKNHLKRHMDAEHNGITHACDFCEKKFKYQTQLYKHVKSSHNGIIHSCETCGKTFGQKRNLRAHIDVAHRSLNMT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01483507; iTF_01482841; iTF_01482682; iTF_01482843;
- 90% Identity
- iTF_01483507; iTF_01482841; iTF_01482682; iTF_01482843;
- 80% Identity
- iTF_01482843;