Tden017870.2
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000085.1:8199-10172[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.13 25 5.8 2.6 18 44 187 210 177 210 0.86 2 15 0.0097 1.9 9.3 0.7 18 43 215 237 211 238 0.91 3 15 0.00021 0.042 14.6 1.9 19 44 247 269 244 269 0.95 4 15 0.24 48 4.9 0.3 18 44 274 297 271 297 0.91 5 15 0.0083 1.6 9.6 0.6 18 43 302 324 298 325 0.88 6 15 0.0081 1.6 9.6 1.2 18 43 330 352 326 353 0.90 7 15 0.0032 0.63 10.9 2.5 19 44 359 381 356 381 0.95 8 15 0.013 2.6 8.9 1.5 19 44 387 409 385 409 0.89 9 15 0.089 17 6.3 1.0 19 44 415 437 410 437 0.93 10 15 0.00024 0.047 14.5 1.7 19 44 443 465 441 465 0.95 11 15 0.071 14 6.6 1.4 19 39 471 488 468 493 0.73 12 15 0.056 11 6.9 2.5 16 43 496 520 486 521 0.85 13 15 0.34 66 4.4 0.4 18 43 526 548 524 549 0.83 14 15 0.013 2.6 8.9 0.7 18 44 554 577 551 577 0.91 15 15 0.35 68 4.4 1.2 19 44 583 605 580 605 0.91
Sequence Information
- Coding Sequence
- ATGAGATTTCCAACCAGTAAGATGGAATCTGGTGATTTATTCAATCCTGCTGtgagAGTGAAAGAAGAACCTCGTGATGAGCCGCTCAATGCTAatgattatgaaataattgacTTGACACTTGCagtaaatcaaaatattaaatacgaAAAGTTTTGGCaagaaaattcaacccaAGAGCTTTTTCAAGAATATGACGAAAATCAGGAAAATGAACTTGACGACATCCAAATCGAATTGGAATGTACAGACATGAAGCCCAATTTATTGGCGGTTGCGAAAATTGAAGATTTCTCTCCAAATCAATGGCCGGATAGCGATGTTCATAAAAACGGAAGTAATATTAAACTAGAAACTGTCGGAACAGTGAAGGAAGAAATTTTCAGTGAAGAAGCCACTGTGATGAATGTTGAACgcgtttcaaaaaatatgaactgTAAACATAGGCTCGAAACTCAAATTGACACTGCGCATAATGGAATCAGACGTGCATGTGACACTTCTGGAAAATCATTCAGGCGACAGACTCATATGAAAGTCCACAAGGATGTCACTCACGCATGTGAAATATGCGGCAATGTATACAAACGaagaaattttctcaaaattcacatcgaCTCGGCGCATAATAGTGTCAGACATGTCTGCGACAtttgtggaaagacattcacacaaaaaatGAGTCTCAAACgtcacatcgattcggtgcattATAAAGTGGCAAATATTACACATCCATGTaatatatgccaaaagacGTTTTCAGTCAAGAGTAATCTCAGAAGACACATCGATTCGTTGCATAAAGGTATCAATTATACGTGTGATTCATGTGGTAACACGTTTACAACAAAGTATAATCTGCAAAACCATATCGACTCGGTGCATAATAGTGTCAGACATGTCTGCGACATTTGTGGAAAAacattcacacaaaaaatGGGTCTCAAACGTCACATCGATTTAGAGCATAATGGTGTTAGACATGTATGTaatatatgccaaaagacattctcagACAAGAGTTAcctaaaaaaacacatcgatttAATGCATAATGGTGTTAGACATGCATGTaatatatgccaaaagacattctcagACAAGAGTTAcctaaaaaaacacatcgattcgaAGCATAATGGTGTCGGTCATGCATGTaatatatgccaaaagacattctcagACAAGAGGAGTCTAAAAAATCACATCGATTCTGTGCATAACAGTGTCagacatgcatgtgatatttgccaaaagacattcttAGGCAAGAGTTAcctaaaaaaacacatcgattcgatGCATAATGGTGTCGGTCATGCATGTaatatatgccaaaagacattcgcagacaagagtaatctcaaaactcacatcgatTCAAGGCATAATGGTGTTAGACATGCATGTaatatatgccaaaagacattctcagACAAGAGAAGTATAAAACAACACACCAATTCGATGCATAAAGCAGTCAAGTATACGTGTGATTCATGTGGTAAGACGTTTACACGAAAGACTTCTCTCCAATACCATATCAACGTAGTGCACAATGGATTCGGCTATGTATGTGATAAGTGCGGAACGAAATACACAACGAAAGGTAATCTTAAAACCCACATCGATGCGATACATAATGGTATCAATTATGCATgtgatttttgtgaaaaaaaatataaatatcaaactCAACTCAATAAGCATGTCAAATCGTCGCATAGTGGTATCATCCATTCATGCGAGACATGCGGCAAGACATTCGGACAGAAAAGAAATCTCAGAGCTCACATCGATATGGCGCATCGCACTCTCATTATGAcctaa
- Protein Sequence
- MRFPTSKMESGDLFNPAVRVKEEPRDEPLNANDYEIIDLTLAVNQNIKYEKFWQENSTQELFQEYDENQENELDDIQIELECTDMKPNLLAVAKIEDFSPNQWPDSDVHKNGSNIKLETVGTVKEEIFSEEATVMNVERVSKNMNCKHRLETQIDTAHNGIRRACDTSGKSFRRQTHMKVHKDVTHACEICGNVYKRRNFLKIHIDSAHNSVRHVCDICGKTFTQKMSLKRHIDSVHYKVANITHPCNICQKTFSVKSNLRRHIDSLHKGINYTCDSCGNTFTTKYNLQNHIDSVHNSVRHVCDICGKTFTQKMGLKRHIDLEHNGVRHVCNICQKTFSDKSYLKKHIDLMHNGVRHACNICQKTFSDKSYLKKHIDSKHNGVGHACNICQKTFSDKRSLKNHIDSVHNSVRHACDICQKTFLGKSYLKKHIDSMHNGVGHACNICQKTFADKSNLKTHIDSRHNGVRHACNICQKTFSDKRSIKQHTNSMHKAVKYTCDSCGKTFTRKTSLQYHINVVHNGFGYVCDKCGTKYTTKGNLKTHIDAIHNGINYACDFCEKKYKYQTQLNKHVKSSHSGIIHSCETCGKTFGQKRNLRAHIDMAHRTLIMT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01483502; iTF_01482803;
- 90% Identity
- iTF_01483502; iTF_01482803;
- 80% Identity
- iTF_01483502; iTF_01482803;