Tden017957.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000085.1:661161-663546[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-06 0.0061 17.0 0.0 7 38 166 197 165 202 0.92 2 2 0.00035 0.39 11.2 0.0 4 43 614 653 612 655 0.92
Sequence Information
- Coding Sequence
- atggcggACGACAAGAGGCGGCGGCGCTCGAGGCCGCCGATCTTCACCGAGAGGGAGGAGAGGCAGCTGGTGCACTACATGAACGCGCGCTCGGCCATGGAGAACGGCATAGGCCGCGCGCGGATGCGCCGGATCGCCTATCAGTACGCCGTCGCGAAGGGACTGAAGTACCCGGCGAGCTGGGACGAGGCCCAGCAGGCCGGTCTCACCTGGCTGCGCAGCTTCACCGTCAAGAATCGCCAGAAGCTGACGATCAAGCCGGAAGAGCTGCTGGCGGCGCGCGACAAAGAAGGCGACTCGTCCttcgacgaggacgaggatcTCGAGGGCTTCGATCCGTTCGAGGACGTCGTCGTGATACACGAGGAGGACgaagaggaggagaaggacGAGAACGCGGACGCAGAAGAagaggacgaagaagaaaaagagccgCCGGAGAAGAAGAGGCGCGTAGGCAGACGGAAAAAGGAGGTGGACAAGAGCGTCGTGCTGCAGGCCATCGAGGACGTGACGAGCAAGAGGCTGAACCTGCGCGAGGCCTCGCGCCTCTACGACGTCGCGCTCACCACGCTCCACCTGCACCTGCGCATCTATCGTGGCGCGGGTGGCTCGGCCGAGGCGTACCTCAGCCAGGCGATCGGACGCAGACGCGGCTTCGCCAGTCGCGACGAGTCGGCCATCGTCGAGCACGGCATGAAGTATCCCAAGGGCTGGGACGAGCGAGAGATCGCGTCGACCAGCTGGATGCTGGGTTTCATCGTTAAGCACGGCCAAGAGTTGAAGCTGGACGAGAAGGCGTTGAAAATTGGTTCCCTGACTTCGAAGAGTAACGCGGAAGGTGTGGAAGAGGATGCGCTCGACGGCGTCGAGGAAGATTCCGAGAGCTGCTCCGTCGGCAACGAATACGTCGACGGCATAAACGACAGTTACTTGTTGAACGAGGACGATGCCTCGGAATCATTTCCGTTCGATTGTCAATACAACGAGGAAAAAGGTGTCGCGATCGAGGAGGTCGTCGTCGCGCCGAGTAAAGCcagcgacgacgaggaaaTTGTCGATGCGATGGACGAGGAACCAGAGGCAGAGGAAAAAGAATGCGACACCAAAGAAGAGGAGAGGACGCTCGACGAAGAGGAGGAAATAGTCCGATACGATCGCGAAGAAGAAGCGACGGACGAAGTGGAGAACGTGAAAATGGTACGAACTTTTTATCACTTTCCCGACATGGTTTACGAGACTTTCGAGCCGGTAGGCGACGTTAACGATAATAATTGCGATATCGTTGAGGATGAATGCTCGGAGTACAGTGACGACTGCGTCGACGTTACCGAAGATCATTTACTCGAAGACAGTGTTAACGATAATTATGTGGAAATTACGAACGAGCACCAAGCCAAAAAACAGGAGATCAACGCCAATTACGTGGTCGAGCTCAACCATAACGATGtagaaattattaatatctCGAGCGACGCTGCCTCCAGTCCCGAGCCAGTctcgaaaaaaatcttcaCCGACGAGGAAGAGTCGCAGCTGGTTGATTATATCAAGTCGGCCTCCTGCCGAGAACCCGAGCTCACTCCGCTCACGCTCAAGCAAGCGAAAAAGCTGACCTACGAGTACGCGACCAAGCAGATACGCAAGTACAGCCGCGTCTACGACGCCTGGCGCGCCTTCGACACCACGTGGATGAGGCAGTTCTACGCGAGGCATCGCGCGGACTTCGCCACGACGCTGGATCCTCGCGAGTTCGAGGcggacggcgacgacgacgagcaggcCCACCGTTACAAGGGCAAAAAGCTCAAGCCCGGCAAGTACGTGTACGACGTGGCGAATCTCCACAAGGCCCTGGACGGCATCGTGGCCGGCGACTGGAGCGTCAAGGAGGGCTCGGATCTGTTCAACATAGCGCCCGCTACGCTGCAGCATCACAAGCGCCTCaccgagcaacagcagcagcagcagcagagtaactcgtcgtcgtcgtcgtcgtgctgcagcagtagcagcagcaaagccGATACGAATTACGAGCTGCACAGGATCTGGAGCGACGAGCAGGAGCGCGACCTCGTGACGCAACTGAACAAGATGGCACGCGCCGAGGGCGGCCTGACCAGGAAGCGATACCGCAAGGAGATCTACGCTTACGCGAAGAAGACGCCGGGGACGCGCTATCCGGGCGCTTGGGACATGCTCGACATGGCGAGCTCGTACTGGACCCAGGGCTTCATGAAGAAGCACAAGGACAGGTTGTGTCTCAGTTGGCCGGTCAAAGTGATAAAGAGTCATTGA
- Protein Sequence
- MADDKRRRRSRPPIFTEREERQLVHYMNARSAMENGIGRARMRRIAYQYAVAKGLKYPASWDEAQQAGLTWLRSFTVKNRQKLTIKPEELLAARDKEGDSSFDEDEDLEGFDPFEDVVVIHEEDEEEEKDENADAEEEDEEEKEPPEKKRRVGRRKKEVDKSVVLQAIEDVTSKRLNLREASRLYDVALTTLHLHLRIYRGAGGSAEAYLSQAIGRRRGFASRDESAIVEHGMKYPKGWDEREIASTSWMLGFIVKHGQELKLDEKALKIGSLTSKSNAEGVEEDALDGVEEDSESCSVGNEYVDGINDSYLLNEDDASESFPFDCQYNEEKGVAIEEVVVAPSKASDDEEIVDAMDEEPEAEEKECDTKEEERTLDEEEEIVRYDREEEATDEVENVKMVRTFYHFPDMVYETFEPVGDVNDNNCDIVEDECSEYSDDCVDVTEDHLLEDSVNDNYVEITNEHQAKKQEINANYVVELNHNDVEIINISSDAASSPEPVSKKIFTDEEESQLVDYIKSASCREPELTPLTLKQAKKLTYEYATKQIRKYSRVYDAWRAFDTTWMRQFYARHRADFATTLDPREFEADGDDDEQAHRYKGKKLKPGKYVYDVANLHKALDGIVAGDWSVKEGSDLFNIAPATLQHHKRLTEQQQQQQQSNSSSSSSCCSSSSSKADTNYELHRIWSDEQERDLVTQLNKMARAEGGLTRKRYRKEIYAYAKKTPGTRYPGAWDMLDMASSYWTQGFMKKHKDRLCLSWPVKVIKSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01483757; iTF_01481510; iTF_01484560;
- 90% Identity
- -
- 80% Identity
- -