Tmad011775.1
Basic Information
- Insect
- Tribolium madens
- Gene Symbol
- dmd-4
- Assembly
- GCA_015345945.1
- Location
- JADDYM010000019.1:12521260-12526092[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-25 2e-21 75.5 10.8 1 47 9 55 9 55 0.98 2 2 0.019 1.1e+02 2.7 0.9 29 35 233 239 231 245 0.86
Sequence Information
- Coding Sequence
- ATGTTATCGAATAGTCGATCAGCTCGAGTACCAAAATGTGCAAGATGCAGAAATCACGGAATGATTTCAACTTTAAGAGGCCACAAGAAACAATGTATTTACAAAAATTGTTCTTGTGCTAAATGTGGTCTAATCAAGGAAAGGCAAAGGATTATGGCGGCTCAGGTGGCCCTAAAACGACAACAAGCGGCCGAAGATGCAATCGCCCTTCATCTAGCCTCCGCAGAAAACGGCACCACTTACGATTATCTCCCTCCTGGTCGTATTTATGGCATGCAAGTCACATCACCTGAACCGGAAGAAGAAAAACAAACTTCGCAACAAGAAACCCAAGATGAAGTCCTTGTTAGTCCAGCATCTATCGATATGCTTAGCAAACTTTTCCCTAACAAAAAAAGATCAGTCTTAGAACTCGTCCTGAAACGTTGCAATCACGATTTACTTAAAGCCATAGAACATTTTAACTTGACTAAATCGAATACTAGTTCTTCGGAGTCCGAATCTAGCACCAAAGAAGAAAACAGTTCTGCTTTCAAACCCGTTGATGCTAATAAACCTAAACCTTTCAATACTCTACACCAAAATTCATTACCCTTGATTTCTGGAAGCAAGGTTTTCATGCACAGTTTGTACCCTTTTTTGCCGTTGTTTAATCCCCAACCTGTTTTACCTAGTCCAGTTTATGTCCCAGGATTTTGTGAATGTGAACAGTGCAAACATAGCCTCTATGCTAGGTTGGAACCTAGACAGTAA
- Protein Sequence
- MLSNSRSARVPKCARCRNHGMISTLRGHKKQCIYKNCSCAKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASAENGTTYDYLPPGRIYGMQVTSPEPEEEKQTSQQETQDEVLVSPASIDMLSKLFPNKKRSVLELVLKRCNHDLLKAIEHFNLTKSNTSSSESESSTKEENSSAFKPVDANKPKPFNTLHQNSLPLISGSKVFMHSLYPFLPLFNPQPVLPSPVYVPGFCECEQCKHSLYARLEPRQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480141; iTF_00752994; iTF_00852708; iTF_01410023; iTF_00415138; iTF_00870605; iTF_01329836; iTF_01283422; iTF_01277938; iTF_00639574; iTF_01567932;
- 90% Identity
- iTF_00415138;
- 80% Identity
- -