Eagr011316.1
Basic Information
- Insect
- Eledona agricola
- Gene Symbol
- dmd-4
- Assembly
- GCA_964023215.1
- Location
- OZ026857.1:25663819-25667463[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-25 2.3e-21 75.7 11.1 1 47 10 56 10 56 0.98 2 2 0.024 1.3e+02 2.8 0.7 29 35 225 231 223 238 0.85
Sequence Information
- Coding Sequence
- ATGTTGTCGACGAACAGCCGAGCGGCCAGAGTACCGAAATGTGCGAGATGCAGAAATCACGGAATGATTTCCACTCTCAGAGGCCACAAGAAGCAGTGCGTTTACAAGAATTGCTCCTGTGCTAAGTGCGGCCTCATCAAGGAGCGGCAGAGGATTATGGCGGCGCAGGTAGCCCTCAAGCGCCAACAAGCCGCCGAAGATGCCATCGCTCTCCACCTCGCATCGGCCGAAAACGGCACCACTTACGACTACCTTCCACCTGGACGCATCTTCGGCATGCAAGTAACATCTCCCGAACCTGAAGAAGACAAGCAAACCGGACAGCAGCAATCGTCTGATGAAATCTCCGTAAGCCCTGCATCCATCGACATGCTCAGCAAACTCTTTCCTAACAAGAAGCGCTCGGTACTTGAGCTGGTGCTCAAACGATGCAACCACGACTTGTTGAAAGCCATCGAACACTTCAATCTGAAGGCAAACTCGACGGAGCCGTGCAAAGAGGAGAGTGCATCAGCGTTTAAACCCGTCAGTACTAAACCTAAACTTTATCCGCATCAATCTCCCTTACCCCTGATCTCAAGCAGCAAAGTGTTTATGCATAGTTTGTACCCGTTTCTTCCACTTTTCAACCCGCAACCTGTTCTACCTAGTCCGGTGTATGTTCCAGGTTTCTGCGAATGCGACCAGTGCAAGCACAGAATTTACTCCAGACTGGAGCAACCTAGACCTTAG
- Protein Sequence
- MLSTNSRAARVPKCARCRNHGMISTLRGHKKQCVYKNCSCAKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASAENGTTYDYLPPGRIFGMQVTSPEPEEDKQTGQQQSSDEISVSPASIDMLSKLFPNKKRSVLELVLKRCNHDLLKAIEHFNLKANSTEPCKEESASAFKPVSTKPKLYPHQSPLPLISSSKVFMHSLYPFLPLFNPQPVLPSPVYVPGFCECDQCKHRIYSRLEQPRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480914;
- 90% Identity
- -
- 80% Identity
- -