Tmad006513.1
Basic Information
- Insect
- Tribolium madens
- Gene Symbol
- lilli
- Assembly
- GCA_015345945.1
- Location
- JADDYM010000020.1:5761013-5773619[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-10 4.5e-06 26.1 5.0 4 130 7 131 4 221 0.74 2 2 0.0075 65 2.5 0.1 349 381 232 264 220 277 0.82
Sequence Information
- Coding Sequence
- ATGTATGAGCGGCACGTGGAGAGAGACCGCCTGCGAGAGCGGGAGAGGCAGGCCCGGGCCCAGATGACTTCGCAAGTGGACGATCAAGGGACTTTTCTATTTGGAGCACCCGTAAGGGTGAACCCGTCCTCTTCGGACCCCGTCACGCAGCAGATCCAGAGCAAACTTGGCGATTTCCAGCGATTGAGGCCGTTCTTGGACCAGAAGGAACTCATCGGTGTCGATGGAGTCCCTCCAAGTCCGGGCGTACCGAACGGGCCGAGCTCGAGGCATAATCCGTTCATRTCGAATCTTTCCTCGKCGGCAGTATCGTCGAGGCTACAACCGTCACCAGAATCTCGTCCCGAATTCAAGAAACCACATCACCATCAAATACATCACCAGCATCAAAGAGGCGGATACGTGAAACCGGCCGACGGGAAACCGCCCTATGAAGGCAGAGGCGGATATCCAGGTCAACCGGTCAAACATGGCAGCGGCATCACAAATCACAGGTCCAACGGGATACTTCCTGCAAAGGGTCCACCTCCGTCGTCGCCTAATTCGTCGGCGTCGTTATTGCCGTCCAGCAACTCCTCCAGGTTACACAACAGTGGCGCACGCAATCATCCCCGCAATACTACTTTCGAACAGAATCAAGGTCCTCCGGCTGGCCCGAGGGAACCTTTGCCTTCCGCTACACCCAATACAGATATGGAGAACATTTTCAAGGAAATGATCGAAGTTCGACGTCCGCTCACTGCCATCGCTGCAACTCCCAGGAAAGAGCCCGATAATAAGTTTGCCTTCAGTCCTGTTTTTACCAAGGTGAGTGCGTCAAATTCTAGACTAATTGCCGATGCGATTCGATTAATTAATTATCCTTGCCTTGTCACGTGA
- Protein Sequence
- MYERHVERDRLRERERQARAQMTSQVDDQGTFLFGAPVRVNPSSSDPVTQQIQSKLGDFQRLRPFLDQKELIGVDGVPPSPGVPNGPSSRHNPFXSNLSSXAVSSRLQPSPESRPEFKKPHHHQIHHQHQRGGYVKPADGKPPYEGRGGYPGQPVKHGSGITNHRSNGILPAKGPPPSSPNSSASLLPSSNSSRLHNSGARNHPRNTTFEQNQGPPAGPREPLPSATPNTDMENIFKEMIEVRRPLTAIAATPRKEPDNKFAFSPVFTKVSASNSRLIADAIRLINYPCLVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00415105;
- 90% Identity
- -
- 80% Identity
- -