Cang012876.1
Basic Information
- Insect
- Cynaeus angustus
- Gene Symbol
- lilli
- Assembly
- GCA_030157275.1
- Location
- CM058063.1:18456801-18471996[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-15 1.6e-10 41.2 0.3 4 120 17 133 15 150 0.84 2 2 0.012 2.7e+02 0.8 0.3 345 380 237 271 225 277 0.78
Sequence Information
- Coding Sequence
- ATGAACCTCCCCAAATCAGCACATTTCTCTGGCTTTGATGTCCGCGTGGAGAGAGACCGCCTGCGAGAGCGGGAGAGGCAGGCCCGGGCACAGATGACTTCGCAAGTGGACGACCAAGGGTCCTTTCTTTTTCGGGCACCCATCCGGGTGCCGTCGGACACAGATCCCCTCTCGCAACAGATCCAGAGCAAGCTCGGCGACTACCAGAGGATAAAACCGTTCATTGACCAGAAGGACCTCATTGGCGTCGATTACGTCCCGCCAAGTCCCGGCGTCCCGAACGGGCCGTCATCTAGACATAATCCTTTTTTTATGTCTAGTACAACATCCTCTGGAACGTCGTCGAGGCTACAACAGTCAGAATCTCGTCCGGAATTTAAGAAACCACATCACCATCAAATACATCATCCACCTTCAAGGGGTGGTTACGTCAAACCAGCCGATGGGAAACCACCTTACGAGGGCAGGGGCGGATATCCAGGTCAACCAGTCAAACATGGCAGCGGCATCACTAATCACAGGTCGAATGGAATTCTTCCTGCCAAGGGTCCACCTCAGTCTTCGCCAAATTCGGCTACGTTACTGCCGTCCAACAATTCCTCCAGTCGGATACATACCAGTGGAGCACGCAATCATCCCCGCAATACTTTTGAACAGAATCAGGGACCTCCGGCTGGCCCGAGGGAACCTTTGCCTTCCGCGACACCCAACACCGAAAATATGGAGAATATATTCAAGGAAATGATCGTAAGAACTCCGGTCACTGCCATTGCCGCTACTCCCCGGAAAGAACCCGACCATAAATTCACCTTTAGTCCAGGTTTTACCAAGttGACGGAGCCGACACCAGCGCCTCCTGCACCTAAGAGTAAGTAG
- Protein Sequence
- MNLPKSAHFSGFDVRVERDRLRERERQARAQMTSQVDDQGSFLFRAPIRVPSDTDPLSQQIQSKLGDYQRIKPFIDQKDLIGVDYVPPSPGVPNGPSSRHNPFFMSSTTSSGTSSRLQQSESRPEFKKPHHHQIHHPPSRGGYVKPADGKPPYEGRGGYPGQPVKHGSGITNHRSNGILPAKGPPQSSPNSATLLPSNNSSSRIHTSGARNHPRNTFEQNQGPPAGPREPLPSATPNTENMENIFKEMIVRTPVTAIAATPRKEPDHKFTFSPGFTKLTEPTPAPPAPKSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480877;
- 90% Identity
- -
- 80% Identity
- -