Tmad009681.1
Basic Information
- Insect
- Tribolium madens
- Gene Symbol
- ARID5B
- Assembly
- GCA_015345945.1
- Location
- JADDYM010000003.1:8742801-8750065[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.56 1.4e+03 -0.3 0.0 37 52 127 142 124 164 0.85 2 3 6.6e-26 1.6e-22 79.6 0.0 2 89 236 321 235 321 0.94 3 3 7 1.7e+04 -3.8 0.0 53 69 403 419 397 429 0.68
Sequence Information
- Coding Sequence
- ATGTTGACTGAGAAATTTTTTGGATTCAAAATCAATGATTTATTTCAGGACGAAGTGCTGGCCATTTCAGAAAAAGTCGTCCTGCGAGTGGAAGATTTAATAACTTGGATCACAGTAGATGCAGAATGGACGTGGGGTAGATTAGCCAAGTGCGAAAAAGACGTAAAAGATCCGCCAAAAAGCGAGGATAACAAAAACAACATCGGATCGCTTACTGAAAGCTCCTTGGACTTTTCAGATGTGGAAAAGGAAAGAAAAGCTTCAGACTGCAATTCTGAGCACTCCGGACCTCCGGTGGTGATCCTGAGTTACCCTCGCTATTGCAGATACCGCGCAATGATGAGAAGATTAGAAGGTGTCGAGAACGAATACCTCAAATACAAAATCGTAAACGCTTTGGGAGGCTTCACAGCTTACACTAAAAACACTAGAGTCCTGTTTTGTAAGGACACTTTCGATTATCCCGAATTAGAAGGTCACGAATTACTTTGCAACCATCTCGCCCCCAAACTCAAGGGAAGGCCCAGAGGCAAACGGAAAAAACGAAGTGTTTCGCCGGGATCAGAGAGCAACGAATCAGAGTCTTCAGTATCAAATGTGTTCAATTCATCAAAGGATAATGGTGCTACTGAAGGTGGCAAAAACGGACTACGCTGTGACAACACTCACCTCAGACGCAGCACAAGAGCTATAGAAAGTAGCGAAAGCAAAGAATTTATTAAAGAATTGACTATTTTTATGAAAACAAACTACACGCCTATAGGAAAAATTCCTTCGTTAGGGTACAAAGAACTCGATTTGTATTCTTTCTATACCAAGGTACAGAAGTTAGGAGGCTACGATTCGGTCACCGCAAATCGACTTTGGAAGTCTATTTTTGATGACATGAGTGGTCACGCTAATAGCACAAGTGCTGCTACGGTCATAAGAAGACACTACGAAAGGTTTCTGTTGCCGTATGAGCGCCATGTGAAAGGTGAAGAGTACAAGCCATTGCCAATTTCAGAAAGACGAAGACTGAAAAGTAAAACTGGAAGCAGCACCAGCGATGCCGAAACAAGCGAAAGCACATCGAGGAGTGGTAACAGCACTCCAGTTCCGCAAGGATCAACACCGGTTACGCCAACCACTCCAACTGAAAACAAGGAATTTAATATACAAGGGAAGACGTCGTCCTTAAGGAGTGTGCGTGTTAAACCGGAAAGACAGAAAGACAAACAAATTAGTGACAAATTGAACATACAAAACAATAATAACGAAATTAAAACCGAAGACGAATCCGAGGTGAAAAGTGAGGTTGTGGCTGTCAAAGCTGAAGAAACAGTGCCAGAAAAAGACGTTGAACCGTTAACTTCAGCAGTGGCGCCAATTGCACAAAAACTAAATCCGGAAAAATCTCATTCGCCAGTCGAAGGTAAAGAAAACATCCCTATCAAAACGGGGGATACTCCGAGCAAAAGTCCAGAAGTCATCGAGGTGCCATACAAACCTAAAACTCCAGAAGTCATCGATCTTGAAGCCGACTCTTACACCAAAACCACCCTCCACCAACCATTCCTCCACGAAGTCAAGAAACGTAAATTAGATATTTTGAAAGAAGGAGGTCTTGAAGTGACACCTGTTCGAAGTTTCGCTCCGCCCACTTCAACTAAAGAGATCCGACCGTCGGTTATACAAACAACCGGAGCTCAAATAGTACACAAACCAATCAAAAATGACATGCCACCTCCGCCACCAAAACGGCCACAAATTGCAGTCCCACAAGCCCTTAGTATAAGTCACGTTAAAGTCGATCAAAAGCCACCCCCGAAACCATTCCCATATGTTAACGGGAACGTCCCCCCGAAAGTCCTACAATCGAAATCGATTTATTCATATTCGGAAAAAACGGTCTACGGCAACCCCAAAGATTTAATGCCGACAACCCACCCTGTCCATACTCCTAAATTCATCGGTACACGAAACGGCGGAGACATCCTCGATTTAACAGTGACAAGTCCCCAAAAACCTATAGTCGAAATTATGAAAATACCAACCCCCACACCACAACCCCCATCTTTCACATCCCCTTCGAAAGTTCCGTACAAACCAACCCCAACGCCACCAATGCTCGACGGTCGCCGTTTAGGTTCGAATCTAGAAATAACGTTAGTTGGGTCAAACAAACAACCAAGTGTTCATAACCAGTCCTCGAAATACCTACCCCCGCCATCTCTCACAAATTACCACAGTATGAGTAGATATCCCCAGAAAAGGATATCATCTGATCATTACAGCAACCACAAAATTCCCCGAATCGAGGAAAACGGTAAATATGGTAAACTCCCTCAGCCAATCACGCCGGTTCCTGTTTTATCGACTCGTGAAAACAAGTCGATGGAACTGAGCGTTCCTCATCCATATGGCCCGAGGAACCATCAACCAATCATAAGCGAGGCTAAGATACCCCCTCAAATGCCGCCGGTGTCAAACTCGAAACATATACCTCCTCCGAGTCCTGCGTTTCCTTATTTATCTCATTTGTATGAGAGTAATAAGAATGTTCCTCCCTATATGCTTTTGGACCCGATTTATTATACAGCAGCCATGCAGAGTTTATATTCGCATAGTCCGTTGAGTGCAACTCATCCGGTGTCACCGTTTCCGTCGACGGAACAATTGAAGTTTTACACGGATTTGATGGCGCACAATTCGCGCTTAAATTTTCCGTTTCCTATTGGTTCAGATGGGAATCCTTCCATTCTTAATAATAACAGTTTGAAAAAGCCGTAA
- Protein Sequence
- MLTEKFFGFKINDLFQDEVLAISEKVVLRVEDLITWITVDAEWTWGRLAKCEKDVKDPPKSEDNKNNIGSLTESSLDFSDVEKERKASDCNSEHSGPPVVILSYPRYCRYRAMMRRLEGVENEYLKYKIVNALGGFTAYTKNTRVLFCKDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSVSNVFNSSKDNGATEGGKNGLRCDNTHLRRSTRAIESSESKEFIKELTIFMKTNYTPIGKIPSLGYKELDLYSFYTKVQKLGGYDSVTANRLWKSIFDDMSGHANSTSAATVIRRHYERFLLPYERHVKGEEYKPLPISERRRLKSKTGSSTSDAETSESTSRSGNSTPVPQGSTPVTPTTPTENKEFNIQGKTSSLRSVRVKPERQKDKQISDKLNIQNNNNEIKTEDESEVKSEVVAVKAEETVPEKDVEPLTSAVAPIAQKLNPEKSHSPVEGKENIPIKTGDTPSKSPEVIEVPYKPKTPEVIDLEADSYTKTTLHQPFLHEVKKRKLDILKEGGLEVTPVRSFAPPTSTKEIRPSVIQTTGAQIVHKPIKNDMPPPPPKRPQIAVPQALSISHVKVDQKPPPKPFPYVNGNVPPKVLQSKSIYSYSEKTVYGNPKDLMPTTHPVHTPKFIGTRNGGDILDLTVTSPQKPIVEIMKIPTPTPQPPSFTSPSKVPYKPTPTPPMLDGRRLGSNLEITLVGSNKQPSVHNQSSKYLPPPSLTNYHSMSRYPQKRISSDHYSNHKIPRIEENGKYGKLPQPITPVPVLSTRENKSMELSVPHPYGPRNHQPIISEAKIPPQMPPVSNSKHIPPPSPAFPYLSHLYESNKNVPPYMLLDPIYYTAAMQSLYSHSPLSATHPVSPFPSTEQLKFYTDLMAHNSRLNFPFPIGSDGNPSILNNNSLKKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01479905; iTF_01567609;
- 90% Identity
- iTF_01479905;
- 80% Identity
- -