Basic Information

Gene Symbol
ARID5B
Assembly
GCA_027724725.1
Location
JALNTZ010000001.1:50794743-50804849[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.62 3.2e+03 -0.2 0.0 37 52 75 90 72 112 0.85
2 2 4.9e-26 2.5e-22 80.2 0.0 2 89 185 270 184 270 0.94

Sequence Information

Coding Sequence
ATGGACCCATTCTTTTTACTTCCCGAGCATAAGCTAATGAAGTATAATAATCGAGTCCATCGGGCGAATGGTCACTTTCATATTTTTTCAACGTGTGATGACCTCTACAACTGCACCTCCGACACCACCGGCCCTCCAGTGGTGATCCTCAGCTATCCCCGCTACTGCAGGTACCGCGCCATGATGCGCCGCCTCGAAGGCGTCGAGAACGAATACCTCAAATACAAAATAGTAAACGCCCTGGGAGGCTTCACCGCCTACACCAAAAACACCCGCGTCCTCTTCTGCAAGGACACCTTCGACTACCCCGAGCTAGAAGGCCACGAACTCCTCTGCAACCATCTCGCCCCGAAGCTCAAAGGCCGGCCGAGGGGCAAGCGGAAAAAACGAAGCGTCTCCCCGGGATCGGAGAGCAACGAATCGGAATCTTCGGTATCCAATGTGTTCAACTCGTCGAAGGAGAAGGTCGCCACGGAGGAGAGCGGCAAGAACGGGATCCGCTGCGACGCGACCCACTTGAGGCGCAGCACGCGAGCCGTGGAGAATAACGAAAGCAAGGAGTTCCTGAAGGAGCTGATGGTGTTCATGAAGACGAACTATACCCCGATCGGGAAGATCCCGTCGCTGGGGTACAAAGAACTGGATTTGTACTCGTTTTACACGAAGGTCCATAAGCTGGGGGGGTACGATGCGGTCACCACCAACCGGTTATGGAAGTCGATTTTTGACGATATGAGTGGGCACGCCAATAGCACGAGCGCTGCTACGGTTATAAGAAGGCACTACGAAAGGTTCCTTCTTCCCTACGAGCGCCACGTCAAGGGCGAAGAGTACAAACCGCTGCCGATCTCGGAAAGACGAAGACTGAAGAGTAAAACTGGCAGCAGCACCAGCGACGCCGAGACCAGCGAGAGCACCTCCAGGAGCGGGAACAGCACCCCGGTCCCGCAGGGGTCCACGCCCGTCACGCCCACCACCCCCACAGAAAACAAAGAATTCACCATCCAAGGCAAGCCCGAGGGGAAAACCTCGTCGTTACGGAGTGTGCGCGTGAAACCCGAGCGACAAAAAGACAAACAAGTTACTAGTGAAAAGTTAAATAACAATAACCTTGAAATAAGTTCGGATGTGAAACCCGAAGTGACCGAAGACGAGCCGGGTGCTAAAGTTCCGAAACTCGAACCGAAAAGTGAGGTGGTGGCGGTGAAAGCCGAAGAAGTAGTGCCGGAGAAGGACGCCGAACCCTTGACCTCGGCGGTCGCGCCCGTCGCTCAGAAACTAACCCCGGAAAAATCTCACTCCCCGGTGGAAGGCAAAGAGAACATCCCCATAATCAAAACCGGGGACACCCCCGCCAAAAGCAAGAGTCCCGAAGTGATCGAGGTGCCATACAAACCCAAAAGTCCGGAAATCATCGACCTAGAAGCGGACACCTACAGTGCGACCACCCTCCACCAGCCCTTTTTCCACGAGGTGAAAAAACGCAAGCTTGAAATTTTGAAGGAGGGGGGACTGGAGGTGACGCCCGTTCGAACGCTAGCTCCGCCCACTTCCATCAAGGAAGTCCGACCGTCGGTCATCCAACCAACCGGGGCCCAGATAGTACCCAAACCAATCAAAAATGAAATGCCGCCGCCGTCGATACCCGTGCCGCCGAAGCGCACGCAAATCTCTGTACCTCAAGCTATTAACATCAGCCAGGTTAAGGTGGACCGTGGTAATAACAAAACCCCGCCTAAAGCCTTCCCCTACGCTAATGGGAGCGGCCCACCTAAAGTCCTCCAATCAAAATCAATTTACTCCTACTCCGAGAAGACGGTCTATGGTAACCCGAAGGACTACGTACCGGCGACGCTTCCAGTGCACACCCCTAAGTTCGTAGGGACGCGCCAAGGGGGCGACATCCTTGACTTGACAGTAACGAGTCCACAGAAACCCGTAGTCGAGATAATGAAAGTCCCTACGCCGGCTCCGCCTATTCCTTTTAGCTCCGCCCCGAAAGTCCCGTACAAACCAACGCCCGCTCCCCCTTTGCTAGACGGGCGGCGCTTGGGTTCCAATCTTGAAATCACGTTAGTCGGGGCAAACAAGCACGCCGCTAGTTTACACCAATCGAAATACGGCTTGCCCCCTCCATCCCTCACGAACTACCCCCGCTACCCCCACAAGCGCCTATCCGCCGACCACTACCCCAACCACAAAGTACCCAGAATGGAGGAGAACGGCAAGTACAATAAATTACCACCACCGATCTCGTCAGTTCCCGTTTTATCCACCCGCGAGAACAAGTCTGCCATGGACATCACTATTCCTCACCCTTACTCGAGGAGTCACCACCAAGCCATGAAGAGCGACCCCAACAAAGTCCCGCCTATGCCTCCGGTGTCCAAGAGCATGCCGCCCCCGGCCGCCGCCTCCTTCCCCTACCTGTCGCACCTCTACGAAAACAAGAACGTTCCTCCGTATCTGCCGCCCCTTCTGGACCCCATCTATTACACTGCCGCCATGCAGAGTCTGTATTCGCATGGTCCCCTGGGGGCGGCGAGCCACCCGGTGCCGCCCTTCCCGCCCGCCGACCAGCTGAAGTTCTACACGGACTTGATTGCGCACACGTCGCGTCTGAACTTCCCGTTTCCTATTGGTTCCGATGGGAATCCTTCCATTGTTAATAATAATTTGAAGAAGCCGTGA
Protein Sequence
MDPFFLLPEHKLMKYNNRVHRANGHFHIFSTCDDLYNCTSDTTGPPVVILSYPRYCRYRAMMRRLEGVENEYLKYKIVNALGGFTAYTKNTRVLFCKDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSVSNVFNSSKEKVATEESGKNGIRCDATHLRRSTRAVENNESKEFLKELMVFMKTNYTPIGKIPSLGYKELDLYSFYTKVHKLGGYDAVTTNRLWKSIFDDMSGHANSTSAATVIRRHYERFLLPYERHVKGEEYKPLPISERRRLKSKTGSSTSDAETSESTSRSGNSTPVPQGSTPVTPTTPTENKEFTIQGKPEGKTSSLRSVRVKPERQKDKQVTSEKLNNNNLEISSDVKPEVTEDEPGAKVPKLEPKSEVVAVKAEEVVPEKDAEPLTSAVAPVAQKLTPEKSHSPVEGKENIPIIKTGDTPAKSKSPEVIEVPYKPKSPEIIDLEADTYSATTLHQPFFHEVKKRKLEILKEGGLEVTPVRTLAPPTSIKEVRPSVIQPTGAQIVPKPIKNEMPPPSIPVPPKRTQISVPQAINISQVKVDRGNNKTPPKAFPYANGSGPPKVLQSKSIYSYSEKTVYGNPKDYVPATLPVHTPKFVGTRQGGDILDLTVTSPQKPVVEIMKVPTPAPPIPFSSAPKVPYKPTPAPPLLDGRRLGSNLEITLVGANKHAASLHQSKYGLPPPSLTNYPRYPHKRLSADHYPNHKVPRMEENGKYNKLPPPISSVPVLSTRENKSAMDITIPHPYSRSHHQAMKSDPNKVPPMPPVSKSMPPPAAASFPYLSHLYENKNVPPYLPPLLDPIYYTAAMQSLYSHGPLGAASHPVPPFPPADQLKFYTDLIAHTSRLNFPFPIGSDGNPSIVNNNLKKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01480637;
90% Identity
-
80% Identity
-