Tcas011811.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- ARID5B
- Assembly
- GCA_000002335.3
- Location
- NC:14128515-14166888[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.6 5.4e+03 -2.6 0.0 3 38 68 105 66 106 0.71 2 4 0.53 1.1e+03 -0.4 0.0 37 52 217 232 214 253 0.85 3 4 7.2e-26 1.5e-22 79.3 0.0 2 89 326 411 325 411 0.94 4 4 3.1 6.6e+03 -2.9 0.1 51 69 485 503 480 512 0.69
Sequence Information
- Coding Sequence
- ATGGATAATGCCGACATACAGCTGGTGGGGGGGCCGTGCGGCCAACACGGGCCGTATACGTTCTACAAGGCGTTTAAATACACGAAAAACGGTGTCAAAAGAATAGTGACTTTGAGTGAATTTTTCTTTGTTAAGCTGTGGATTGACTCGGATTTGTTGTGCATTGGTGAATTGCAGTTGTTATGGAGTGATAAAAATAGTGACCAAGTGCTGGCCAGTTTACGGCTTTACTTCCTTCCAGAGAATACGCCGGAAGGTCGCATGGACCACGGAGAGGTAAGCAATCGAAGGTTACGATGTTATCATCTCCATCATCAGGACGAAGTGCTGGCAATCTCCGAAAAAGTCGTCCTGCGAGTGGAAGATTTAATAACTTGGATCACAGTAGATGCAGAATGGACGTGGGGTAGATTAGCCAAGTGCGAAAAGGACGTAAAAGATCCGCCAAAAAGCGAGGACAACAAAAACACCATCGGATCGCTTACTGAAAGCTCCTTGGACTTTTCGGACGTGGAAAAGGAAAGAAAAGCTTCAGATTGCAACTCGGAGCACTCGGGACCGCCGGTGGTGATCCTGAGCTATCCGCGCTACTGCAGATACCGTGCAATGATGAGAAGATTAGAAGGTGTCGAGAACGAATACCTCAAATACAAAATTGTAAACGCTTTGGGCGGCTTCACAGCCTACACTAAAAACACACGCGTCCTGTTTTGCAAGGACACTTTCGATTATCCCGAATTAGAAGGTCACGAATTACTTTGCAACCACCTCGCTCCCAAACTCAAAGGCAGACCCAGAGGCAAGCGGAAAAAACGAAGTGTCTCTCCGGGTTCAGAGAGCAACGAATCAGAGTCTTCAGTATCAAATGTGTTCAATTCGTCTAAAGAGAATGGTGCTACTGACGGTGGCAAAAACGGGCTACGGTGCGACAACACTCACCTCAGACGCAGCACAAGAGCTACGGAAAGTAACGAAAGCAAAGATTTCATCAAAGAATTGACTGTTTTCATGAAAACTAACTATACGCCTATAGGAAAAATACCCTCGTTAGGATACAAAGAACTCGATTTGTATTCGTTTTACACCAAGGTGCAAAAGTTGGGAGGCTACGATTCGGTCACAGCAAATCGACTCTGGAAGTCTATTTTTGATGATATGAGCGGGCACGCTAGTAGCACAAGTGCTGCCACCGTCATACGAAGACACTACGAAAGGTTTTTGCTGCCGTATGAGCGCCACGTGAAAGGCGAAGAGTACAAGCCGTTGCCAATTTCAGAAAGACGAAGACTGAAAAGTAAAACTGGAAGCAGCACCAGCGATGCTGAAACAAGCGAAAGCACATCAAGGAGTGGCAATAGCACTCCAGTTCCGGTTACTCCAACCACTCCAACTGAAAACAAGGAATTTAATCTACAAGGGAAGACGTCGTCCTTGCGGAGTGTGCGCGTTAAACCGGAAAGACAGAACAAACAAATTAGTGACAAGTTGAACATACAAAACAATAATAACGAAGTTAAAACCGAAGACGAATCCGAGGTGAAATGTGAGGTAGTGGCGGTCAAAGCTGAAGAAACAGTGCCCGAAAAGGACGCCGAACCGTTGACTTCGGCAGTGGCGCCAATCGCACAAAAACTCACCCCTGAAAAATCTCATTCGCCAGTCGAGGGCAAAGAAAACATCCCCATCAAAACGGGGGATACCCCGGCCAAAAGTCCCGAAGTCATCGAGGTGCCATACAAACCCAAAACCCCCGAAATCATCGACCTTGAAGCGGACACTTACCCCAAAACCACCCTCCACCAACCATTCCTCCACGAAGTCAAGAAACGCAAATTAGAGATTTTGAAGGAAGGCGGTCTCGAAGTGACACCAGTTCGTAGTTTCGCTCCACCCACGTCAACAAAAGAGATCCGGCCGTCGGTTATCCAAACAGCAGGAACGCAAGTAGTCCACAGACCAATCAAAAATGAAATGCCACCGCCGCCGCCAAAACGGCCCCAAATCGCGATCCCACAAGCCCTTAGCATAAGTCACGTTAAACTCGATCAAAAACAACCACCCCCCAAACCATTCCCATACGTTAACGGCAACGTCCCCCCCAAAGTCCTCCAATCGAAATCAATCTACTCATATTCGGAAAAAACCGTCTACGGCAACCCCAAAGACCTAATGCCGAGCACCCAACCAGTCCACACCCCCAAGTTCGTGGGCACGCGAACCGGGGGCGACATCCTCGACCTGACGGTAACCAGCCCCCAAAAACCAATAGTCGAAATCATGAAAATACCAACCCCCACGCCACAACCCCCCACGTTCACGTCCCCGTCGAAAGTTCCGTACAAACCGCCACTGATCGACGGCCGCCGGTTAGGCTCAAACCTTGAAATAACACTAGTTGGGTCAAATAAACCAAGCGTTCACCAATCCTCGAAATACCTACCGCCACCGTCTCTCACAAACTACAACATGAGCAGATACCACCCCCAGAAACGTGTATCGTCCGACCATTACACCAACCACAAAATTCCCCGAATCGACGAAAACGGAAAGTATGGCAAACTCCCGCCGGCTCCGGTTTTGTCGACTCGGGAGAACAAGTCGTTGGAACTGAGCGTTCCGCAGCCTTATGGCTCCAGGAACCACCAAGCGCCAATCAAAAGCGAGGCCAAAGTGCCGCCGCAGATGCCCCCGGTGTCCAACGCCAAACATGTACCGGGTCCGGCGTTTCCGTATTTGTCTCACTTGTACGAGGGTAATAAGGGGGTGGCGCCCTATGTGCCCTTTTTGGACCCGATTTATTACACGGCAGCGATGCAAAGTCTGTACTCGCACAGTCCGCTGACTGCGACCCATCCAATGCCGCCGTTCCCCTCGACAACGGAACATTTAAAGTTGTATTCGGATTTGTTGGCGCACAATTCGCGCTTGAATTTTCCGTTTCCGATTGGGTCAGAAGGGAATCCTTCCATTCTTAACAATAACAACAGTTTGAAGAAGCCGTAA
- Protein Sequence
- MDNADIQLVGGPCGQHGPYTFYKAFKYTKNGVKRIVTLSEFFFVKLWIDSDLLCIGELQLLWSDKNSDQVLASLRLYFLPENTPEGRMDHGEVSNRRLRCYHLHHQDEVLAISEKVVLRVEDLITWITVDAEWTWGRLAKCEKDVKDPPKSEDNKNTIGSLTESSLDFSDVEKERKASDCNSEHSGPPVVILSYPRYCRYRAMMRRLEGVENEYLKYKIVNALGGFTAYTKNTRVLFCKDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSVSNVFNSSKENGATDGGKNGLRCDNTHLRRSTRATESNESKDFIKELTVFMKTNYTPIGKIPSLGYKELDLYSFYTKVQKLGGYDSVTANRLWKSIFDDMSGHASSTSAATVIRRHYERFLLPYERHVKGEEYKPLPISERRRLKSKTGSSTSDAETSESTSRSGNSTPVPVTPTTPTENKEFNLQGKTSSLRSVRVKPERQNKQISDKLNIQNNNNEVKTEDESEVKCEVVAVKAEETVPEKDAEPLTSAVAPIAQKLTPEKSHSPVEGKENIPIKTGDTPAKSPEVIEVPYKPKTPEIIDLEADTYPKTTLHQPFLHEVKKRKLEILKEGGLEVTPVRSFAPPTSTKEIRPSVIQTAGTQVVHRPIKNEMPPPPPKRPQIAIPQALSISHVKLDQKQPPPKPFPYVNGNVPPKVLQSKSIYSYSEKTVYGNPKDLMPSTQPVHTPKFVGTRTGGDILDLTVTSPQKPIVEIMKIPTPTPQPPTFTSPSKVPYKPPLIDGRRLGSNLEITLVGSNKPSVHQSSKYLPPPSLTNYNMSRYHPQKRVSSDHYTNHKIPRIDENGKYGKLPPAPVLSTRENKSLELSVPQPYGSRNHQAPIKSEAKVPPQMPPVSNAKHVPGPAFPYLSHLYEGNKGVAPYVPFLDPIYYTAAMQSLYSHSPLTATHPMPPFPSTTEHLKLYSDLLAHNSRLNFPFPIGSEGNPSILNNNNSLKKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480637;
- 90% Identity
- iTF_01480637;
- 80% Identity
- -