Tcas006513.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- lilli
- Assembly
- GCA_000002335.3
- Location
- NC:5664185-5700650[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 9.9e-05 1.2 7.7 0.7 29 130 8 110 2 193 0.71 2 6 4.4e-12 5.5e-08 32.0 21.7 349 513 211 389 195 390 0.60 3 6 1 1.3e+04 -11.5 18.6 91 215 429 547 398 586 0.44 4 6 0.21 2.7e+03 -3.3 8.6 436 479 570 609 555 626 0.52 5 6 0.0044 56 2.3 12.0 164 250 880 965 845 1035 0.54 6 6 0.15 1.9e+03 -2.7 0.6 193 205 1148 1152 1077 1224 0.49
Sequence Information
- Coding Sequence
- ATGACTTCGCAAGTGGACGATCAAGGGACCTTTCTGTTTGGAGCACCCGTTAGGGTGAACCCGTCCTCTTCGGACCCCGTCACGCAGCAGATCCAGAGCAAGCTCGGCGACTTCCAGCGACTGCGGCCGTTCCTGGACCAGAAGGACCTCATCGGCGTCGATGGCGTCCCGCCAAGTCCCGGCGTGCCCAACGGGCCGAGCTCGAGGCATAATCCGTTCATGTCGAATCTTGCCTCGGCGGCGGTGTCGTCGAGGCTCCAACCCTCACCAGAATCTCGTCCCGAATTCAAGAAACCACATCACCACCAGATACATCACCAGCATCAAAGAGGCGGATACGTGAAGCCGGCCGACGGGAAGCCGCCCTACGAAGGCAGAGGCGGATATCCAGGTCAACCGGTCAAACACGGCAGCGGCATCACAAATCACAGGTCCAACGGGATCCTTCCGGCGAAGGGTCCGCCCCAGTCGTCGCCGAACTCGTCGGCGCCGCTCTTGCCGTCCAGCAACTCCTCCAGGTTACACAACAGTGGCGCACGCAATCATCCCCGCAATACTACGTTCGAACAGAATCAAGGACCTCCGGCTGGCCCGAGGGAACCTTTGCCTTCCGCTACACCCAATACAGATATGGAGAACATTTTCAAGGAAATGATCGAAGTTCGACGTCCGCTCACTGCCATCGCTGCAACTCCCAGGAAAGAGCCCGATAATAAGTTTACCTTCAGTCCTGTTTTTACCAAGTTGACGGAGTCTACGCCAACGCCGTCTGCACCGAAGAAACGCGAAAAAGTCGCAGCTCCACGCCCGTCAACTGACTTACGAGATGATCTAAATCTGTCAGATGACAGCGATGACGATCAAAAGCAATCTTCCAAGTTACCAGTAGAAAAGATGGTTTCTCCGCTGGGTGCGACTCCGGCCGTTGGTAGTTTCTCCAAGATGGAGTATCCGCCGGAACCGGCAGATCCGGCTGGGTCTTCGTCGAGCGATTCGGGCTCGGATTCGGGATCAGAGAGCGACTCGAGCAGCGACGATTCGGCCGAAGACAACGTGACTTCGTCGAATCCGAGCAAATCAAACGTAGTACCTGCCGAAACGGGACCGTCTTCGCCGCCTCCGCCCGAAGAAAAAGACAAGAAGCGATGGAACCTTGGTTCGTATTTGGTCATCGACCAGAACAACGCCAAAGCGGACTCCGTTCTCTCACCGAAAGTACAAACGTCGCCGCTCACCTCCAGCATGCTCCCTTTGGCCGTCGACAAGAAAAAAGTTACCGAAGAGTCGGACGCCAGTGATTCGACGAAAGATCTAGACAGTGTGGTTGCCGAGGCACTGGCCTCGGCAACGGTGCCCCTCTTGTCGAGTTTCTCCGATTCGGACGATAGTGTGACGGAAAGACGCACGAAAAGACGCAAACATACCATAATACAATCAGTTACCAAAAATTCGGAAAGTGACAGTGACGATGCCGAACGGACGAAAAAACCGAAACCGGTGCGACGTGCCAGTCCTCGGACTAAATCAGTGGATTCGTGTAGTGATTCGGACAATAACAGTGCCAATATTATCAAAAAACGTCTATCACCTTTGCCTCATAAATCGCCCGAACAGTTAGTCAAACCCAAACAGAGTCGCGGACGTCCCAGAAAAATCAAACCGGCTGTGAGTGGATCCGACAAGAAACCGCGAAAAAGGGGACGACCACCAAAACCCCGACCCTCACACCCGAGCAGTTCCGACGAAGAAGACAACGTGGACAAAAGGCCGGTCCGACGGAGAACAATCTCGAAACGTGACGCTTCGAGCAGCTCCGACTCAGACTCACGGTACCGAAAGTACGAATCACCAAAGAAAATCCCAAAACCATTCGAGGACAAAATCAAAAGGCCCGCCATCAAAAACGACTCGGACGACGATTGGGGCAAGAAGAACAAGAACAAACTGAAACCAAGACAGAGGAGCGAGTCGGAAAGCTCCAAGAAGAACGACTCCCCCAAGAAGGAGGTCTTCCGGCGGAAAGGAAGAACGTCAAACCCACATCACAAAAGCGCCGCAACTCTTCCCACAACGACCGATTCGAGCGACAGCGATTCGGGCCCTTCCAAGCGCTTACAACGAAGTCTGAGTTCAAGGAGTCGCAGCCGGTCCTCGGACAGCGACACGAACATTCTAGCCAAATCCCCGGTGAATAAAGTCGAGGAGACGAAACCGATCAAAGACAAAAACAAGAGCGACACTCTACGCAAGCTGTTCACTCCGAAGCGCGACTCCGAGGGCGGCAAAGGGGGCGGCAAAGGCGGCGGCAAGGGCGGGAAAGGCGGCAAGGGCAAGGGGGGCGTCAATGTGATATTCGCCGACGGCGGAAACGAACGCTGCGTTTCGCCCGTCGAAGACGAAACAATGCCGACCATATCAAACCCAACTCTCCTATCACCAATCCCCCACAAGGAGGCCAAACCTCCACTAGCATCCCCTTGCGCCGAACCAATCAAATTCATTAAGACTGAGCCTCTCGATGACGAGAAAATCTCGATGAAAGTCAAAATCGGTCTGAATCGCATCGACTTGAACGCTGTGATTTGCCTCAAAAACAAGCTCGAAGCGCTGAAACATCCCTACTTCCGGGAGTTTGAGAAGAAGAAGCTGAGCGATAATGATAACGAAAGTAAGAAGAAGGATTCGGATTTGGCCGAATTGAAGCACAAGTCGAAGAAGCGAAAGCGGCGGAACAGTTCGAGCTCGATTTCGTCGCTGTCGACGGTCAGCAACTTGTCGCACAGTAGCAAGAAACTGGAGCATCGCAAAGATCGGGAGAATCACAAGATGAAACGGCGAAAAGACGACGAAATCTATCCCAGATCACAAAGTGATAATATCAGTCTGACGAATGCACCACCGACCAATCACGAGCGGGAAGGTAGCAGAAGTCGGCAGGTGATCTCGCCCGTCGACAAAAACAAGTCGCAAAGTACCAGGGAGTATCATTCGTACTTTGAGAAGCCCGACGAGCCCCTAGAGTGCGAAGAGAGAGCTCAAAGTCAGTACCTGAGCGATGCGACTCGTTTGAAGCACTTAGCTGATAAAGAGACTGATACAACAAAACAGTGTATGCTGTACCTGGAGGCTGTACTTTTCTTCTTACTAACGGGCAACGCCATGGAACTCACAAGGGTTACAGAAAACGCCTGTTTCACAATGTATAAAGACACATTATCGTTAATAAGGTACATCACTTCGAAATTTCGAAGTCAACATAACGCGTCTTCGAAGCACAACAAGCTCGCTGTGTTAAGTTATCGGTGCCAAGCGCTTCTTTATTATAAACTATTCAAGATGAAGAAGCACGAAGCGAAGGACTACCAGAAGGTCCTCAGCGAATATTTCAACAACAAGGCCGTTGCGATCCCCCCAGAGCAGCAGACCCAGCAAGGCCAGGGTACACCGTCGCCCATGTCACCGACGCCGTCTCCTGCCGGTTCTGTGGGTTCGGTGGGCAGCCAGTCGTCCGGCTATAGCAGTGGTGAGTTGGCGGCGAGGGGCAGCAACGTGCCGCCACCTGTTCCATCAACGCACGCACAAAGTGGGGGCGCTCACGTGTGGATTCCTCAAAATATTTACAACGCCATGTACAAGCAGAACCAGAATTTCACATATCTTCTGTCTTGTCAGGATCTGTGGGATACGGCCGATGCGCTCGTCATCAAGGGCAAACACACAGATTTCTTTATCGACTTGGATAGGCTGTGCAAGCCTCTGACGATGCACAGCTCGCTGATAGACCTGGTGAGGTACATTCGCGAAGGGATAAAAAGGTTGAATGAGAGTTAG
- Protein Sequence
- MTSQVDDQGTFLFGAPVRVNPSSSDPVTQQIQSKLGDFQRLRPFLDQKDLIGVDGVPPSPGVPNGPSSRHNPFMSNLASAAVSSRLQPSPESRPEFKKPHHHQIHHQHQRGGYVKPADGKPPYEGRGGYPGQPVKHGSGITNHRSNGILPAKGPPQSSPNSSAPLLPSSNSSRLHNSGARNHPRNTTFEQNQGPPAGPREPLPSATPNTDMENIFKEMIEVRRPLTAIAATPRKEPDNKFTFSPVFTKLTESTPTPSAPKKREKVAAPRPSTDLRDDLNLSDDSDDDQKQSSKLPVEKMVSPLGATPAVGSFSKMEYPPEPADPAGSSSSDSGSDSGSESDSSSDDSAEDNVTSSNPSKSNVVPAETGPSSPPPPEEKDKKRWNLGSYLVIDQNNAKADSVLSPKVQTSPLTSSMLPLAVDKKKVTEESDASDSTKDLDSVVAEALASATVPLLSSFSDSDDSVTERRTKRRKHTIIQSVTKNSESDSDDAERTKKPKPVRRASPRTKSVDSCSDSDNNSANIIKKRLSPLPHKSPEQLVKPKQSRGRPRKIKPAVSGSDKKPRKRGRPPKPRPSHPSSSDEEDNVDKRPVRRRTISKRDASSSSDSDSRYRKYESPKKIPKPFEDKIKRPAIKNDSDDDWGKKNKNKLKPRQRSESESSKKNDSPKKEVFRRKGRTSNPHHKSAATLPTTTDSSDSDSGPSKRLQRSLSSRSRSRSSDSDTNILAKSPVNKVEETKPIKDKNKSDTLRKLFTPKRDSEGGKGGGKGGGKGGKGGKGKGGVNVIFADGGNERCVSPVEDETMPTISNPTLLSPIPHKEAKPPLASPCAEPIKFIKTEPLDDEKISMKVKIGLNRIDLNAVICLKNKLEALKHPYFREFEKKKLSDNDNESKKKDSDLAELKHKSKKRKRRNSSSSISSLSTVSNLSHSSKKLEHRKDRENHKMKRRKDDEIYPRSQSDNISLTNAPPTNHEREGSRSRQVISPVDKNKSQSTREYHSYFEKPDEPLECEERAQSQYLSDATRLKHLADKETDTTKQCMLYLEAVLFFLLTGNAMELTRVTENACFTMYKDTLSLIRYITSKFRSQHNASSKHNKLAVLSYRCQALLYYKLFKMKKHEAKDYQKVLSEYFNNKAVAIPPEQQTQQGQGTPSPMSPTPSPAGSVGSVGSQSSGYSSGELAARGSNVPPPVPSTHAQSGGAHVWIPQNIYNAMYKQNQNFTYLLSCQDLWDTADALVIKGKHTDFFIDLDRLCKPLTMHSSLIDLVRYIREGIKRLNES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00752958;
- 90% Identity
- -
- 80% Identity
- -