Gcor015450.1
Basic Information
- Insect
- Gnatocerus cornutus
- Gene Symbol
- lilli
- Assembly
- GCA_029298725.1
- Location
- CM055516.1:13572524-13595472[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1e-11 2.3e-07 30.8 0.1 4 115 4 115 3 137 0.77 2 6 2.4e-09 5.5e-05 23.0 18.4 345 512 224 405 211 407 0.58 3 6 1 2.3e+04 -9.3 16.3 421 497 471 550 405 578 0.38 4 6 1 2.3e+04 -16.8 38.4 86 240 606 752 578 774 0.28 5 6 0.054 1.2e+03 -1.3 23.0 87 245 903 1051 882 1079 0.50 6 6 0.051 1.2e+03 -1.2 1.7 164 220 1155 1216 1111 1261 0.48
Sequence Information
- Coding Sequence
- ATGTGCGTGGAGAGAGACCGCCTGCGAGAGCGGGAGAGGCAGGCCCGGGCACAGATGACTTCGCAAGTGGACGACCAAGGGTCCTTTCTTTTTCGGGCACCCATCAGGGTGCCATCGGACACAGATCCCCTCTCGCAACAGATCCAGAGCAAGCTCGGCGACTTCCAGAGGATAAAACCGTTCATTGACCAGAAGGATCTCATTGGCGTCGACTACGTGCCGCCAAGTCCTGGCGTCCCGAACGGGCCGTCATCTAGACATAATCCTTTTTTTATGTCTAGTACAACATCCTCTGGAACGTCGTCGAGACTACCACAGCCAGAATCTCGTCCGGAATTTAAGAAACCACATCACCATCAAATACATCATCCACCGTCAAGGGGCGGTTACGTCAAACCTGCAGATGGGAAACCACCTTACGAGGGCAGGGGCGGATATCCAGGTCAACCAGTCAAACATGGCAGCGGCATCACTAATCACAGGTCGAATGGAATTCTTCCTGCCAAGGGCCCACCTCAGTCTTCGCCAAATTCGGCTACGTTACTGCCGTCCAACAATTCCTCCAGTCGGATACATACCAGTGGAGCACGCAATCATCCCCGCAATACTTTTGAACAGAATCAGGGACCTCCGGCTGGCCCGAGGGAACCTTTGCCTTCCGCGACACCCAACACCGAAAATATGGAGAATATTTTCAAGGAAATGATCGTAAGAACTCCGGTCACTGCCATCGCCGCTACTCCCCGGAAAGAACCCGACCATAAGTTCACCTTTAGTCCAGGTTTCACCAAGCTGACGGAGCCGACTCTAGCGCCTCCTGCACCGAAGAAACGTGAAAAGCTGCCCGCCCCTAGACCGTCAACTGACCTCAGAGATGATCTAAATCTGTCAGATGACAGCGATGACGAACAAAAAAGAGATCTGCAGTCGTCCAAGTTACCAGTAGAAAAGATGGTCTCCCCGTTGGGTGCTACTCCTGCCGTCAATAACTTCCCGAAGATGGACTACGCCCCCGTGCCCCCCGAGACGGCGGCAGCATCTTCGTCTAGTGAGTCAGGTTCAGAAAGTTCCGAAAGTGATACGAGTACTGACGATTCCGTGGAAGACAACGTTTCTTCATCAAACCCCGCGAAGATGAATCCCCCGCCGGAAACGACGCCTTCTTCGCCGCTTCCCGAAGAAAAACACAAGAAGAGGTGGAACCTGATGTCGTATATGATCGACCAAAATAACAAGGCGGATTCGGTTCTCTCGCCAAAAGTACAAACATCACCCCTGACTTCCAGCCTGCTCCCGTTGGATAGTAAGAAGAAAGTTACCGAGGAATCAGACGCCAGCGATTCGACCAAAGATTTGGACAGTGTCGTGGCCGAGGCGTTTGCGACGACGAGAGTTCCGTTGTTATCGAGTTTTTCGGATTCGGACGATAGTGCGGCGGAAAGGCGCACGAAAAGGCGTAAACGTGCCCAGATATCAGTTACCAAAAGTTCAGACAGTGATAGTGACGACGAAAGGACGAGAAAACCAAAACCTATTCCGGTTAGACGCGCAAGTCCGAGGACTAAATCAGTGGATTCGTGTAGTGATTCGGATGCCGAAACAAAACCGTACAATAATAGTGCCAACGTTAATAAAAAACGATCGCCTCCATTGCCACATAAATCGCCGGAACAACTGGCCAAACCGAAGTCAAACAGAGGACGACCGAGGAAAAAACCGGCTGTGAATGGTTCGGAAAAGAAACCGAAAAAGAGAGGGCGGCCGCCGAAGGTGCGACCTCCCGATCCTAATAGCAGTTCCGACGAAGAAGACACCGAAAAACAGAGGCCGGTCAGAAGTCGGACCATTTCAAAAAGAGATGCTTCTAGCAGTTCTGATTCGGACGTGCATCGCTCGAAGTTCGGACCGCCTAAGAAGACTCACGAAGACAAGATCAAGAAGCCCAAGAACGATTCAGACGATGACGATTGGGTCAAGAAGAACAAAAACAAACTGAAGCAAAGACAAAGGACTGAGTCAGAGAATTCGAAAAAGAACGAATTACTGAAGAAAGACACTTATAGACGGAAAGGAAGGGCGTCTTCTCAAATGAAAAGTGCCGAAACTCTTCCTACAACGACCGATTCGAGTGACAGCGATTCGGGGCCTTCCAAAAGTCGCCTACAACGAAGTCCCAGCTCCGGCAGCCGAAGGAGTAGGTCTTCAGACAGCGACCACCACACTAGAGTTTCGTCCGCGAACAAAGTCGAAGTAAAAGTAGAAGAATCGAAGCCAATTAAAGATAAAAACAAAAGCGATACGTTGCGGAAACTTTTCACGCCGAAAAGGGACTCAGAAGGTGGGAAAGGCGGCGGAAAAGGAGGAGGCAAAGGTGGGAAAGGTGGCAAGGGCAAGGGCGGCGTCAACGTGATTTTCGCTGACGGTGGCAACGAACGAAGTAGTTCACCAGTCGAAGACGAATCGATGCCAACCATATCAAACCCAACACTGCTATCGCCAATCCCAAATAAAGACATAAAGCCACCTTTGTCGCCCTGTAACGAACCAATCAAATTCATTAAGACTGAACCGGACGATGGCAATCACGCTGACGAGAAGATGTCGATGAAAGTTAAAATCGGATTGAGCCGTATCGATCTGAATTCCATCACgagtttaaaaaacaaattggaaaaCTTAAAACATCCGTATCTTCGCGAATTAGACAAGCTAAAGAATAGAGTTGTCGAATCTAAAGACAAGACACTGAAAGAAAGTGATAGTGAGAATAAGAAACCGTGGCGAACGGAGAAAGAACCATCGTCCGATCTAACCGAATTAAAACACAAATCAAAAAAACGGAAGAGACGCAACAGTTCGAGTTCTATTTCTTCGATGTCGACGGTCAGCAACATGTCACATAGCAGCAAGAAGTTGGAACATCGAAAAGAAAGGGACAATCATAAATCCAAGAGGCGAAAAGAAGAAGCCGAAATTTACCCGAGATCTCAGAGCGATAATATCAGTCTTACGAATGCACCACCGACGAACCACGAGCGGGAAGGCAGCAGGAGTCGACAGTTGACTTCACCTGTCGACAAAAATGCCAAGTCGCAGAGTACCAAGGAGTATTATTCGTACTTTGAGAAACCGGATGAGCCTCTGGAGTGCGAAGAAAGagctcaaagTCAGTACCTGAGCGACGCCACAAGGTTAAAGCACCTTGCCGATAAGGAGACTGATACCACCAAGCAGTGTATGCTGTACCTGGAAGCCGTACTTTACTTTTTATTGACAGGCAACGCCATGGAACTCACTAGGGTAACCGAAAATGCCTGTTTCACAATGTATAAAGACACATTATCGTTAATAAGGTACATCACCTCGAAATTCAGAACTCAACATAATGCGTCTTCGAAGCACAACAAGCTCGCCGTTTTGAGCTACCGGTGCCAAGCACTTTTGTActataaattattcaaaatgaaGAAACATGAAGCGAAAGAACACCAGAAGATCCTGAGCGAGCACTTTAACAATAAGGCTGTCGCGATGCCCCCGGAGCAGCAGAATCAGCAAGGTCAAGGTACCCCGTCCCCAATGTCCCCTACACCGTCTCCTGCTGGTTCAGTGGGTTCGGTGGGCAGCCAGTCGTCGGGTTATAGTAGCGGCGAATTGGCGGCGAGGGGCAGCAACGTGGTGGCTGCAGCCGTGCCCTCTACACACACGCAGAGCATGGGGGCTCACGTGTGGGTTCCTCAAATTGTCTACAATGCTATGTacaaacaaaaccaaaatttaacaTATCTTTTGTCTTGTCAGGATCTCTGGGATACGGCTGATGCCCTCGTGATTAAGGGTAAACATACAGAGTTCTTTATCGATTTGGACAGGTTGTGTAAACCTTTAACGATGCACAGCTCGCTGATCGACTTGGTGAGGTATATTCGCGAGGGTATAAAAAGGTTAAACGAAAGTTAG
- Protein Sequence
- MCVERDRLRERERQARAQMTSQVDDQGSFLFRAPIRVPSDTDPLSQQIQSKLGDFQRIKPFIDQKDLIGVDYVPPSPGVPNGPSSRHNPFFMSSTTSSGTSSRLPQPESRPEFKKPHHHQIHHPPSRGGYVKPADGKPPYEGRGGYPGQPVKHGSGITNHRSNGILPAKGPPQSSPNSATLLPSNNSSSRIHTSGARNHPRNTFEQNQGPPAGPREPLPSATPNTENMENIFKEMIVRTPVTAIAATPRKEPDHKFTFSPGFTKLTEPTLAPPAPKKREKLPAPRPSTDLRDDLNLSDDSDDEQKRDLQSSKLPVEKMVSPLGATPAVNNFPKMDYAPVPPETAAASSSSESGSESSESDTSTDDSVEDNVSSSNPAKMNPPPETTPSSPLPEEKHKKRWNLMSYMIDQNNKADSVLSPKVQTSPLTSSLLPLDSKKKVTEESDASDSTKDLDSVVAEAFATTRVPLLSSFSDSDDSAAERRTKRRKRAQISVTKSSDSDSDDERTRKPKPIPVRRASPRTKSVDSCSDSDAETKPYNNSANVNKKRSPPLPHKSPEQLAKPKSNRGRPRKKPAVNGSEKKPKKRGRPPKVRPPDPNSSSDEEDTEKQRPVRSRTISKRDASSSSDSDVHRSKFGPPKKTHEDKIKKPKNDSDDDDWVKKNKNKLKQRQRTESENSKKNELLKKDTYRRKGRASSQMKSAETLPTTTDSSDSDSGPSKSRLQRSPSSGSRRSRSSDSDHHTRVSSANKVEVKVEESKPIKDKNKSDTLRKLFTPKRDSEGGKGGGKGGGKGGKGGKGKGGVNVIFADGGNERSSSPVEDESMPTISNPTLLSPIPNKDIKPPLSPCNEPIKFIKTEPDDGNHADEKMSMKVKIGLSRIDLNSITSLKNKLENLKHPYLRELDKLKNRVVESKDKTLKESDSENKKPWRTEKEPSSDLTELKHKSKKRKRRNSSSSISSMSTVSNMSHSSKKLEHRKERDNHKSKRRKEEAEIYPRSQSDNISLTNAPPTNHEREGSRSRQLTSPVDKNAKSQSTKEYYSYFEKPDEPLECEERAQSQYLSDATRLKHLADKETDTTKQCMLYLEAVLYFLLTGNAMELTRVTENACFTMYKDTLSLIRYITSKFRTQHNASSKHNKLAVLSYRCQALLYYKLFKMKKHEAKEHQKILSEHFNNKAVAMPPEQQNQQGQGTPSPMSPTPSPAGSVGSVGSQSSGYSSGELAARGSNVVAAAVPSTHTQSMGAHVWVPQIVYNAMYKQNQNLTYLLSCQDLWDTADALVIKGKHTEFFIDLDRLCKPLTMHSSLIDLVRYIREGIKRLNES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480111;
- 90% Identity
- -
- 80% Identity
- -