Trub009526.1
Basic Information
- Insect
- Triatoma rubrofasciata
- Gene Symbol
- PAXBP1
- Assembly
- None
- Location
- chr11:9972811-9988330[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.73 4.6e+03 -3.6 0.9 57 78 77 98 71 106 0.69 2 2 2.3e-24 1.4e-20 73.5 0.7 2 272 520 733 519 735 0.90
Sequence Information
- Coding Sequence
- ATGTCATTATTTAAAAAACCAAAAAGGAACCTACGAATCAGGGAAAATACATGCTCAGAAGATGCAGATAATGAAAATGATTCTGAAATTTGTTTACAAGACACAACAAAGAATTCTAAAACAAAACTTCATAAACCTACATCTTATTCTTCTGTTTTAAGTTTTGGAGAAGATTTAATTGAAGGTGATGATGGCGAGGTGTTCAAAGTCAAGAAGTCAGCTCAGAGTAAAAAAATTAAGAAATTACTTGATAAGGAAAGGAAAAAACAAAAAGAAAAATCAAACACAACGATTGATACTATTGAAAAAACCACACAACCCAATCTAGATGAAGATATTGTTATTAAACTTAAAAATACATTTCCAATATTGAATGGTCGAGAGGCTATTGCAGCTGTACAGGAAGGAATTAGTTCAGAAGATGAAGAAGAAAGCTCTGATATCGGTCCTAAATACATTAAACAATCAGATTCGGTTAAATTACTATTAAAAAAAGGTAAGATTCCTGATGCTGCTACGATTCATGCAGCCCGAAAGCAAAGGCAACATGTCAGAGAAATGGGAGAAATTGTTCCTCTGCCAGAGGAAACTGCAAATAGATTTGATGTAAATAATAAATCCCGGCTTGTTAGAGAAGACGATAATGATGCAAGTGATCTTGAAGAGGAAAGGATAAATATGGCTGTAAATATAGCTGCAGAAGACAGGATACGACGGAAAGCAGAATTCGAGGCCGCCCAAGGCAGAGTAACTGATGAAAGTGATAAAGGGGAAGAGGAAGAATGGGAAAATCAACAAATCAGGAAAGGTGTAACAGGGGCTCAGATAGCAGCAGTCCAACAAGAAACCATGTATTACCAACAGTATTTAGGAGCCGTAGGAGTACCAATGAATTGTGAAGTATCAGATGCTAGTCACATAGAATCAAATGCACTTATATTTCCACCATTACCGCCGACTGAAGCAATGGATCCACAACTTGTTATTACTAAATTGAAAGACAGATTGGCCGATCTCCGTGAAGTGCATCGTAGACACACATTAGAGTGCAATACAGCAGCCGAAGAGATTGAAGTACTTGGGAAAGAAAGCAATCAATTGAAGGAGGATGCGCCAAGATTAGCAGAAAGATTTGGCTATTACCAAGACTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTAGATGAGAAGATTGTGATCATTGAGCTCCTTGAGCAAAGGATAGAGTCTCTGTTTACACGCAGAGTTAATGAATACATGTCTAGAAGAAGGCAAGATGTTATGGACCAAGCGCAAGAGCTTGCTCCAACTTCTCAAAGGATGCGAATTGAAAAGGATGAAGCGCAAGTTAGAAGGGTTGCTGAAAGGGAAGGTAGACGTATTCGGAGGCAAAGAGTTCGGGAACTGAAAGGTATTGTATCTCATATTGATGGAATGTCTAGCGATGAAGAAATAACGGAAACTGAATTAATTACTGCCCGAACTCAAAGAGAGGTTATTGAACAAGATTCAAAACATGTATTTGAAGATACATTGGATGAATTTGCTACCGTCAGAGGAATATTGGAAAGATTTGAATCGTGGCGGCGAAGTGATATCGATGCGTACAGAGAAGCTTATGTTAGTCTGTGCCTTCCAAAATTGTTGGGGCCAATTCTACGGCTAAAACTTTTATTTTGGAATCCATTTTCACAAGGTAATAATATTGACATAGAGAAAACTGCATGGTGTAATAGTATATTACTTTACGGGTTGGAGAGGACAGAAACAGAAGAACAGTTGAGGAAAGATCCAGATGTTCAACTTTTGCCTAGGGTTATTGAACGGATAGTGTTACCAAAGTTATCAAAGCTTACCTCTCTTTGTTGGGATCCCTTATCAAGTTCGCAGACTGTTTCTTTAGTTGGTCTAGTAACCAAACTTATTCAAGACTATCCCACTATAACACCTACATCAAAATTTCTTACTAATTTAATTAATACAGTCTTAGACAAAATGAAAGAAGCTGTTGAAAATGATGTTTTCATACCTATTTATCCGCAGCAGAGATTGTCAGAAGCAAAGGTAAATAATTTTTTCCTACGACAGTGTACAGTTGCTGTAAAATTGCTGGGAAATTTAGTTCGTTGGCAAGGAATATTGAGTGATAATATTCTATCAGAAATTGCTCTAGACTCTCTACTCAACAGATATTTACTCTCAGCTATTAGAACTTGTAGTCCATTGCAGGCAGCCAATATCTGCCAAATGGTTGGAAGTGTTCTACCTCGAATATGGCTTCAGATATGTGTTCACCCTCCACAACTTCAACAATTCTTAAATCAGGCGAAAATAATAGCAAAACAATTAGATACAGATAAACCAACGGAAAGGGATGCTCTAGAAAGAATGAGTGGTATATTGAAAGCAATTTCTTAA
- Protein Sequence
- MSLFKKPKRNLRIRENTCSEDADNENDSEICLQDTTKNSKTKLHKPTSYSSVLSFGEDLIEGDDGEVFKVKKSAQSKKIKKLLDKERKKQKEKSNTTIDTIEKTTQPNLDEDIVIKLKNTFPILNGREAIAAVQEGISSEDEEESSDIGPKYIKQSDSVKLLLKKGKIPDAATIHAARKQRQHVREMGEIVPLPEETANRFDVNNKSRLVREDDNDASDLEEERINMAVNIAAEDRIRRKAEFEAAQGRVTDESDKGEEEEWENQQIRKGVTGAQIAAVQQETMYYQQYLGAVGVPMNCEVSDASHIESNALIFPPLPPTEAMDPQLVITKLKDRLADLREVHRRHTLECNTAAEEIEVLGKESNQLKEDAPRLAERFGYYQDLRGYVTDLVECLDEKIVIIELLEQRIESLFTRRVNEYMSRRRQDVMDQAQELAPTSQRMRIEKDEAQVRRVAEREGRRIRRQRVRELKGIVSHIDGMSSDEEITETELITARTQREVIEQDSKHVFEDTLDEFATVRGILERFESWRRSDIDAYREAYVSLCLPKLLGPILRLKLLFWNPFSQGNNIDIEKTAWCNSILLYGLERTETEEQLRKDPDVQLLPRVIERIVLPKLSKLTSLCWDPLSSSQTVSLVGLVTKLIQDYPTITPTSKFLTNLINTVLDKMKEAVENDVFIPIYPQQRLSEAKVNNFFLRQCTVAVKLLGNLVRWQGILSDNILSEIALDSLLNRYLLSAIRTCSPLQAANICQMVGSVLPRIWLQICVHPPQLQQFLNQAKIIAKQLDTDKPTERDALERMSGILKAIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478820;
- 90% Identity
- iTF_01301629;
- 80% Identity
- -