Tinf038236.1
Basic Information
- Insect
- Triatoma infestans
- Gene Symbol
- PAXBP1
- Assembly
- GCA_011037195.1
- Location
- JAAEAF010005135.1:10962-23690[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1 2.9e+04 -3.6 1.0 57 77 76 96 70 103 0.68 2 2 1.5e-14 3.7e-10 41.9 0.2 2 151 519 630 518 657 0.85
Sequence Information
- Coding Sequence
- atgtcattatttaaaaaaccgAAAAGGAATATACGAATCAGAGAAAATACATGCTCAGAAGACGCCGATAATGAAAATGATTCTGAAATTTGTTTACCAGACACCAAGAATTCTAAAACTAAACTTCATAAACCTACATCATATTCTTCTGTTTTAAGTTTCGGAGAAGATTTAAATGAagGTGATGATGGCGAGGTGTTCAAAGTCAAGAAGTCAGCTCagagtaaaaaaattaagaaattacttgataaagaaaggaaaaaacaaaaagaaaaatcaaacacAACGATTGATACTACTGAGAAAACGACACAACCCCAACTAGATGAAGATATtgttattaaacttaaaaatacatttCCAATATTGAATGGTCGAGAGGCTATTGCAGCTGTacaggaagggattagttcagaagatgaagaagaaagcTCTGATATCGGTcctaaatacataaaacagtcggattcagttaaattactattaaaaaaAGGTAAAATTCCTGATGCTGCTACAATTCATGCAGCCCGAAAGCAGAGGCAACATGTAAGAGAAATGGGAGAAATAGTTCCTCTGCCAGAGGAATCTGCAAATAGGTttgatgtaaataataaatcccGACTTGTTAGAGAAGACGATAATGATGCAAGTGATGCTGAAGAGGAAAGGATAAATATGGCTGTAAATATTGCTGCAGAAGACAGGATACGACGGAAAGCAGAATTCGAGGCCGCTCAAGGGAGAGtaacTGATGAAAGTGATAAAGGAGAAGATGAAGAGTGGGAAAATCAGCAGATCAGGAAAGGCGTGACAGGAGCTCAGATTGCAGCAGTCCAACAAGAAACCATGTATTACCAGCAGTATTTAGGAGCAGTAGGAGTACCAATGAATTGTGAAGTATCAGATCCTAGTCACATAGAATCAAATGCACTTATATTTCCACCATTACCGCCAACTGAAGCGATGGATCCACAACTTgttattactaaattaaaagacAGaTTGGCCGATCTCCGTGAAGTTCACCGTAGACACACATTAGAGTGCAATACAGCAGCCGAGGAAATAGAGACACTTGGGAAAGAATGCGATCAGTTGAAGGAGGATGCGCCAAGATTAGCAGAAAGATTTCGCTATTACCAAGACTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTAGATGAGAAGattgtgATCATTGAGCTCCTTGAGCAAAGGATAGAGTCTCTGTTTACACGCAGAGTTAATGAATACATGTCTAGAAGAAGGCAAGATGTTATGGACCAAGCGCAAGAGCTTGCTCCAACTTCTCAAAGGATGCGAATTGAAAAAGATGAAGCACAAATTAGAAGAGTTGCAGAAAGGGAAGGTAGACGTATTCGGAGGCAAAGAGTTCGGGAACTCAAAGGTATTGTATCTCATATTGATGGAATGTCCAGCGATGAAGAAATAACGGAAACTGAATTAATTACTGCCAGAACTCAAAGAGaGGTCATTGAACAagattcaaaacatgtatttgaaGATACACTGGATGAATTTGCTACCGTCAGAGGAATATTGGAAAGATTTGAATCGTGGCGACGAAGTGATATCGATGCGTACAGAGAAGCGTATGTTAGTCTGTGCCTTCCAAAATTGTTGGGGCCAATTCTAcggctaaaacttttattttggaatcCATTTTCACAAggTAGTAATATTGATATAGAGAAAACTCCCTGGTGTAATAGTATATTACTTTACGGGTTAGAGAGGACAGAAACAGAAGAACAGTTGAGGAAAGATCCAGATGTTCAACTTTTGCCTAGGGTTATTGAGCGAATAGTGTTACCAAAATTGTCAAGAAATCTAGTTCGTTGGCAAGGAATATTGAGCGATAATATTCTATCCGAAATTGCTTTAGATTCATTGCTCAACAGATATTTACTATCAGCTATTAGAACTTGTAGTCCGTTGCAGGCAGCAAATATTTGTCAGATGGTTGGAAGTGTTCTACCTCGAATATGGCTTCAGATATGTGTTCATCCTCCTCAGCTACAACAATTCTTAAATCAGGCAAAAATAATAGCAAAACAATTAGACACAGATAAACCAACGGAAAGGTAA
- Protein Sequence
- MSLFKKPKRNIRIRENTCSEDADNENDSEICLPDTKNSKTKLHKPTSYSSVLSFGEDLNEGDDGEVFKVKKSAQSKKIKKLLDKERKKQKEKSNTTIDTTEKTTQPQLDEDIVIKLKNTFPILNGREAIAAVQEGISSEDEEESSDIGPKYIKQSDSVKLLLKKGKIPDAATIHAARKQRQHVREMGEIVPLPEESANRFDVNNKSRLVREDDNDASDAEEERINMAVNIAAEDRIRRKAEFEAAQGRVTDESDKGEDEEWENQQIRKGVTGAQIAAVQQETMYYQQYLGAVGVPMNCEVSDPSHIESNALIFPPLPPTEAMDPQLVITKLKDRLADLREVHRRHTLECNTAAEEIETLGKECDQLKEDAPRLAERFRYYQDLRGYVTDLVECLDEKIVIIELLEQRIESLFTRRVNEYMSRRRQDVMDQAQELAPTSQRMRIEKDEAQIRRVAEREGRRIRRQRVRELKGIVSHIDGMSSDEEITETELITARTQREVIEQDSKHVFEDTLDEFATVRGILERFESWRRSDIDAYREAYVSLCLPKLLGPILRLKLLFWNPFSQGSNIDIEKTPWCNSILLYGLERTETEEQLRKDPDVQLLPRVIERIVLPKLSRNLVRWQGILSDNILSEIALDSLLNRYLLSAIRTCSPLQAANICQMVGSVLPRIWLQICVHPPQLQQFLNQAKIIAKQLDTDKPTER*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01479430; iTF_01301629;
- 90% Identity
- -
- 80% Identity
- -