Trub006286.1
Basic Information
- Insect
- Triatoma rubrofasciata
- Gene Symbol
- E2F8_1
- Assembly
- None
- Location
- chr4:1102978-1110204[+]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.9e-17 9.9e-14 50.3 0.1 3 65 71 137 69 137 0.94 2 3 5.9e-14 1.5e-10 40.2 0.1 5 64 197 269 193 270 0.81 3 3 0.82 2.1e+03 -1.9 0.1 2 22 470 489 469 507 0.61
Sequence Information
- Coding Sequence
- ATGGACGGGCCAGAATTTTGCAGTCCTCCTAAAAGGATAATACTTGGCAATCTGAATCAAAACGGAGGTTCGCCTGTCTCGCCTATGGCAAATTTGAAGTTACTAACTAAAGTCGCTACTAGTCGCTTTTCTGTCGGAGAAAATACGGAATGTGAGGTACCTTTGGAAAATCGTGATTTAAAAATTGATAGCAAACCATCCAGAAGATTGAGATCACTTAGTTTCATCTGTAAAAAGTTTCTTCTTTTGTATAAGTTAGACATACCTGTGGGAGATAGTCAGCAGATATCATTAGGAAATTTGGCTTTGTCGCTTGGTATTGAAAAAAGAAGGGTGTATGATATAATAAATGTAGTTTCTAGTCTTCATATGGCTGTTAAGGTGTGTAAGGACAAATACAATTGGTATGGGTATCAAAATTTAACACGACTATTGACGAAGTTAAAGGCATATGCATTGATTAATAAGTTCGATGAGCAGATCAAAGCTGTTCTTCAAAATCAATTTACACTATCTGAATCCAAAGAATCTGATTCTCCTTATATAAAGATTACTAGAGGTGATCGTTCCGTTTTTGAGGAAAATCGGATTGGTATACTCTGTCAGAAGTTCATCATGCTCTTCCTTGTCTGTAATCATGATGTTGCTTTAAACATGTGCACCATTTCTAAGCTCATACTCACTGGAGATGTCCAGGAAAAAACTGGCATGCGAAGACTATATGATATAGCCAATGTTTTGGAGGCTTTAGCTCTCATTAAACGATACCATTACAAAATTATGAAGAAGCCTGCTTTTAAATATTGCGGCCCTATAATAAATATTGATCGTACAAACTGTGAGAAGCTGATGCCGGAAAAGTTACCTTGTGTGGCGGTTTATGAAACAAGTGATCAGGGTGACACTAATTCAGATTCTTCACTAGACTTTCTACCAACGGGTTCAAAACTAGATTCAATTTTGGAAGTTGTATGCACGGAGATTGAAGAAGAAAACAGCCGAACATTTTCCTCGCCAATTAACACCGTTAAAAGAAAATCTACGGTCACGGACCGGATCCATTGTAACGCCAAGAAACAATTATTTCCATCACCGTTTGTTATGAAATCTTTGGATACTGTTAATACATTTATTAAGGCCCCAAAACATTCTTTTCGATTACAATGCAATGAATTACAAATTAAAGAGACCAATACAATAACACTACAAAATAATAATAATAATGAGGTTGGTGTGGAAGGGCAGCAGCCCATGATCAATGGAGCTCGCAGATATTCCAATTTTAGAACTAGTTTCAGTACATTGGCACGTTTAGAAGAGAATTGCGTGAGTAATGCACCTTCAGAAGACATTTTTCAGACGGGGGCAGAATGGTCTCAGCCATCTTTCTCCTCCAATAATTTATCAAATGAATCTTTAAAGCTGATCACTAGTGACATGAAAACAACAGAAAGACAAAATAATAATAAATTAGTGTTACATAAATTATCTAATCTTGCCCAGACGATTGCGCCAACCAAAATTAAAGTAATCCGTCCAACGAAAATATCCGATATTCAAAATGGTGGTGTTTATAAAGTACTAAAAAAAGGCAATACTGTGCAATTGTATGCATTATGA
- Protein Sequence
- MDGPEFCSPPKRIILGNLNQNGGSPVSPMANLKLLTKVATSRFSVGENTECEVPLENRDLKIDSKPSRRLRSLSFICKKFLLLYKLDIPVGDSQQISLGNLALSLGIEKRRVYDIINVVSSLHMAVKVCKDKYNWYGYQNLTRLLTKLKAYALINKFDEQIKAVLQNQFTLSESKESDSPYIKITRGDRSVFEENRIGILCQKFIMLFLVCNHDVALNMCTISKLILTGDVQEKTGMRRLYDIANVLEALALIKRYHYKIMKKPAFKYCGPIINIDRTNCEKLMPEKLPCVAVYETSDQGDTNSDSSLDFLPTGSKLDSILEVVCTEIEEENSRTFSSPINTVKRKSTVTDRIHCNAKKQLFPSPFVMKSLDTVNTFIKAPKHSFRLQCNELQIKETNTITLQNNNNNEVGVEGQQPMINGARRYSNFRTSFSTLARLEENCVSNAPSEDIFQTGAEWSQPSFSSNNLSNESLKLITSDMKTTERQNNNKLVLHKLSNLAQTIAPTKIKVIRPTKISDIQNGGVYKVLKKGNTVQLYAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478665; iTF_01301429;
- 90% Identity
- -
- 80% Identity
- -