Tinf017171.1
Basic Information
- Insect
- Triatoma infestans
- Gene Symbol
- MBD2
- Assembly
- GCA_011037195.1
- Location
- JAAEAF010001578.1:59970-65731[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-11 3.1e-07 31.9 0.2 2 47 4 49 3 90 0.84 2 2 0.0018 17 7.1 0.1 28 74 91 145 75 148 0.85
Sequence Information
- Coding Sequence
- atgtcaattgaaaaaaagaagtatgaATGTTCTAGTTTACCAAAAGTTTGGCAAAGAGAAGAGGCTATTAGAAAATCAGGTTTTTCTTCTGGAAAAATAGATGTTAGCTTTTACAGCCCGGAAGCTCACAGATATGATCCTAAACCTCATCTTACTCGACCAGTAACCGATACGATAGATCTTACAGCGTTTGATTATACGACTAGCGATTGTAACACACTTCGCAGGCCTAAAAAACCTAGGACTACACAATTTGACTACAGTAGTCGAGGTGTAAGGAATGATGCATCTTTGGTCCCACCAATTAGGCAGACTGCTTCCATTTTCAAACAGCCTGTTACAGTATATAAAACGCAAGAAGGCAAAGTTAAAACAGATTTTAAACATGGCCCTCAGGAAAAACCAAAACAGTTATTTTGGGAAAAACGACTTGAGGGTTTGCGAGCCAGTGATAAAGATGGTTGTGAGGTAGATGCAATGGAATTGCCAAAATCTTTACGTCCAGTTGGACCTAACGTTGGAGAAGAAACTCTTCTACAATCTGTAGCCACAGCACTGCATGTATTGTCTCAACCTATTACTGGTCAGACAGCATCCAGGGCAGCTCTAGCTAAAGACCCTGGTATATACATAAATCCTGAACAACCATTGGTACagGCAATGAATATAAGCGACGAGGATATACGGCGACAAGAAGAGCGTGTACAATTAGCCCGAAGAAGATTACAAGAAGCAGTAAGAGATTTAGAAGAATCCACTGTAACTACTTAA
- Protein Sequence
- MSIEKKKYECSSLPKVWQREEAIRKSGFSSGKIDVSFYSPEAHRYDPKPHLTRPVTDTIDLTAFDYTTSDCNTLRRPKKPRTTQFDYSSRGVRNDASLVPPIRQTASIFKQPVTVYKTQEGKVKTDFKHGPQEKPKQLFWEKRLEGLRASDKDGCEVDAMELPKSLRPVGPNVGEETLLQSVATALHVLSQPITGQTASRAALAKDPGIYINPEQPLVQAMNISDEDIRRQEERVQLARRRLQEAVRDLEESTVTT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01301634;
- 90% Identity
- iTF_01301634;
- 80% Identity
- -