Tvap016798.1
Basic Information
- Insect
- Trialeurodes vaporariorum
- Gene Symbol
- -
- Assembly
- GCA_011764245.1
- Location
- HIC:49222331-49224766[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.036 20 5.3 1.5 15 40 5 27 2 30 0.72 2 28 0.02 11 6.1 2.9 10 41 29 56 24 58 0.77 3 28 5.6e-05 0.031 14.3 3.1 11 41 58 84 48 86 0.83 4 28 0.0017 0.93 9.6 2.5 12 41 86 112 83 114 0.89 5 28 0.012 6.8 6.8 7.5 1 41 104 140 104 142 0.93 6 28 0.00016 0.088 12.9 1.5 17 41 147 168 141 170 0.89 7 28 0.48 2.7e+02 1.7 4.1 17 41 175 196 169 198 0.88 8 28 0.13 72 3.5 7.7 2 41 189 224 188 226 0.87 9 28 0.017 9.6 6.3 2.3 17 41 231 252 224 254 0.87 10 28 0.015 8.4 6.5 2.7 17 41 259 280 253 282 0.89 11 28 0.0085 4.7 7.3 3.0 17 41 287 308 281 309 0.90 12 28 0.18 97 3.1 1.5 17 38 315 337 309 338 0.75 13 28 0.028 15 5.7 2.5 17 41 343 364 335 366 0.87 14 28 0.0072 4 7.6 4.6 1 41 356 392 356 395 0.87 15 28 0.00012 0.064 13.3 3.7 13 41 395 420 387 422 0.85 16 28 0.002 1.1 9.3 2.8 12 41 422 448 419 450 0.89 17 28 0.012 6.8 6.8 7.5 1 41 440 476 440 481 0.93 18 28 0.024 13 5.9 2.7 17 41 483 504 476 506 0.87 19 28 0.019 11 6.2 3.0 17 41 511 532 505 534 0.89 20 28 0.0081 4.5 7.4 3.0 17 41 539 560 533 562 0.90 21 28 0.02 11 6.1 1.9 17 41 567 588 561 590 0.88 22 28 0.017 9.6 6.3 4.9 1 41 580 616 580 618 0.90 23 28 0.013 7 6.8 5.0 1 41 608 644 608 646 0.89 24 28 0.053 29 4.8 5.0 5 41 640 672 638 674 0.84 25 28 6.7e-05 0.037 14.1 1.0 14 41 676 700 673 701 0.91 26 28 2.6 1.5e+03 -0.6 0.2 18 41 708 728 704 730 0.83 27 28 0.00018 0.1 12.7 1.7 2 41 721 756 720 757 0.88 28 28 0.00011 0.059 13.4 1.6 18 41 764 784 760 786 0.93
Sequence Information
- Coding Sequence
- ATGTTTAATGACAAATCATTTGCATGCACTTACTGCAATGCAAAGTTTTCTCAAAAGGGCCACATGATCGAGCATATCAGAAAACATACCGGTGAAAAACCATTTGAATGCACTCACTGCAATGCAAAATTTGCTCGGAAGAGCGATCTGAAGCTTCACATCAGAACACATACCAGTGAAAAACCATTTGAATGCACTCACTGCAATGCAAAATTTGCTAGAGAGAGCAATCTGAAGCGACACATCAGAACACATACCGATGAAAAACCATTTAAATGTACTCACTGTATAGCAAAATTTTCTGTAAAGAGCAATCTGAAGAAGCACATCAGAACACACACCGGTGAAAAACCATTTGAATGCAGTCACTGTAATGCAAAATTTGCTCAGAAAAGCCATATGAAAAGACACATCAGAACACACACTGGTGAAAAACCATTTGAATGCACTCACTGCAATGCAAAATTTGCTGGAGAGAGCAATCTGAAGCGACACATCAGAACACACACTGGTGAAAAACCATTTGAATGCACTCACTGCATAGCAAAATTTACCATAAAGAGCCATCTGAAGAAGCACATCAGAACACACACCGGTGAAAAACCATTTGAATGCAGTCACTGTAATGCAAAATTTGCTCAGAAAAGCCATATGAAAAGTCACATCAGAACACACACTGGTGAAAAACCATTTGAATGCACTCACTGCAATGCAAAATTTGCTAGTATGAGCATTCTGAAGCGTCACATCAGAACACACACTGGTGAAAAACCATTTGAATGCACTCACTGCAATGCAAAATTTGCTCACAAAACCGATCTGAAGCGACACATCAGAACACATACCGGTGAAAAACCATTTAAATGTACTCACTGTATAGCAAAATTTTCTGTAAAGAGCAATCTGAAGAAGCACATCAGAACACACACCGGTGAAAAACCATTTGAATGCACTCATTGTAATGCGAAATTTGCTGACAAGAGCAAAATGAAGAGTAACATCAGAACACACACTGGTGAAAAACCATTTGAATGCACTCATTGTAATGCGAAATTTGCTGACAAGAGCAAAATGAAGAGTCACATCAGAACACACACTGGTGAAAAACTATTTGAATGCACTCACTGCAATGCAAAATTTGCTCGGAAGAGCGATCTGAAGCTTCACATCAGAACACATACCAGTGAAAAACCATTTGAATGCACTCACTGCAATGCAAAATTTGCTAGAGAGAGCAATCTGAAGCGACACATCAGAACACATACCGATGAAAAACCATTTAAATGTACTCACTGTATAGCAAAATTTTCTGTAAAGAGCAATCTGAAGAAGCACATCAGAACACACACCGGTGAAAAACCATTTGAATGCAGTCACTGTAATGCAAAATTTGCTCAGAAAAGCCATATGAAAAGACACATCAGAACACACACTGGTGAAAAACCATTTGAATGCACTCACTGCAATGCAAAATTTGCTAGTATGAGCATTCTGAAGCGTCACATCAGAACACACACTGGTGAAAAACCATTTGAATGCACTCACTGCAATGCAAAATTTGCTCACAAAACCGATCTGAAGCGACACATCAGAACACATACCGGTGAAAAACCATTTAAATGTACTCACTGTATAGCAAAATTTTCTGTAAAGAGCAATCTGAAGAAGCACATCAGAACACACACCGGTGAAAAACCATTTGAATGCACTCATTGTAATGCGAAATTTGCTGACAAGAGCAAAATGAAGAGTCACATCAGAACACACACTGGTGAAAAACCATTTGAATGCACTCATTGTAATGCGAAATTTGCTGACAAGAGCAAAATGAAGAGTCACATCAGAACACACACTGGTGAAAACCCATTTGAATGCACTCACTGCAATGCAAAATTTGCTAGTATGAGCATTCTGAAGCGTCACATCAGAACACACACTGGTGAAAAACTATTTGAATGCACTCACTGCAATGCAAAATTTGCTCACAAAACCGATCTGAAGAAGCACATCAGAACATTTACTGGTGAAAAATCATTTGAATGCACTCACTGCGATGCAAAATTTGCTCGAAAGAGCAATCTGAAGTCTCACATTAGAACACATACCGGTGAAAAACCATTCGAATGCACTGATTGCAATGCAAAATTTGCTTGGAAGAGCGTTCTGAAGAATCACATCAGAACACATACTGGTGAAAAACCATTTGAATGCACTCACTGCAATGCAATATTTGCTCGAGAGAGCGCTCTGAAGCGACACATCAGAACACATACAGGGACAAAACCATTCGAATGCACTCACTGCAATGCAAAATTTGCTCGTAAGAGCAATCTGAAGAAGCACATCAGAACACATACCAGTGAAAAACCATTTGAATGCAAAATTTCATCAAAATCACTCTCTAAGCTTATTAGAACACATGCTGGTGATGAATGA
- Protein Sequence
- MFNDKSFACTYCNAKFSQKGHMIEHIRKHTGEKPFECTHCNAKFARKSDLKLHIRTHTSEKPFECTHCNAKFARESNLKRHIRTHTDEKPFKCTHCIAKFSVKSNLKKHIRTHTGEKPFECSHCNAKFAQKSHMKRHIRTHTGEKPFECTHCNAKFAGESNLKRHIRTHTGEKPFECTHCIAKFTIKSHLKKHIRTHTGEKPFECSHCNAKFAQKSHMKSHIRTHTGEKPFECTHCNAKFASMSILKRHIRTHTGEKPFECTHCNAKFAHKTDLKRHIRTHTGEKPFKCTHCIAKFSVKSNLKKHIRTHTGEKPFECTHCNAKFADKSKMKSNIRTHTGEKPFECTHCNAKFADKSKMKSHIRTHTGEKLFECTHCNAKFARKSDLKLHIRTHTSEKPFECTHCNAKFARESNLKRHIRTHTDEKPFKCTHCIAKFSVKSNLKKHIRTHTGEKPFECSHCNAKFAQKSHMKRHIRTHTGEKPFECTHCNAKFASMSILKRHIRTHTGEKPFECTHCNAKFAHKTDLKRHIRTHTGEKPFKCTHCIAKFSVKSNLKKHIRTHTGEKPFECTHCNAKFADKSKMKSHIRTHTGEKPFECTHCNAKFADKSKMKSHIRTHTGENPFECTHCNAKFASMSILKRHIRTHTGEKLFECTHCNAKFAHKTDLKKHIRTFTGEKSFECTHCDAKFARKSNLKSHIRTHTGEKPFECTDCNAKFAWKSVLKNHIRTHTGEKPFECTHCNAIFARESALKRHIRTHTGTKPFECTHCNAKFARKSNLKKHIRTHTSEKPFECKISSKSLSKLIRTHAGDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01478323; iTF_01478581;
- 90% Identity
- iTF_01478323; iTF_01478581;
- 80% Identity
- iTF_01478323; iTF_01478581;