Tzet000840.1
Basic Information
- Insect
- Trachymyrmex zeteki
- Gene Symbol
- retn
- Assembly
- GCA_001594055.1
- Location
- NW:1272587-1386020[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-25 1.8e-22 78.8 0.0 2 89 251 336 250 336 0.96
Sequence Information
- Coding Sequence
- ATGGACACCGCAGACGAGCAAGATTTAGAGAACCCAGGTGGAGGTTCGATGGCTAACGGCGCCAACGGAACCAATGGGACAAATGGAGCCAACGGTCAACACCAGACGCCGGAGGGTTCTTTGTATCAGGAAGAGAAGTCGGAAGATGAATCAGATATGGAGGATGAAACACAAGATGAAGAAGATTTACTCTCACCGCCACTTCAAGTCAATCCACAAGCTTTGGATGCAGCTGCAGGTGCATCATCATTAGCACATTTGAGCAATTTAATGAATCATCCACAGTTACTAACGAAATTTAGATTGGAGCATACTGAGGCAGATATGTTACAAGGTAGAAATAGTTTAGAGGTTCTACAGGCTGCAATGAGCAGTGGTAACTTCGGCTTGTTTCCACCTTTATACATGTCGtcgccgccgccaccaccgccaccaccaccatcATTACCATCACAGTCGTCGCAAAACAACCATTCGCAAATCGCGGGAAGTCTCGGGAATCAAATCGGTGATCAAGCATTGGCTTGCTCCACTACTTCCTCCAGACCTGCTTCCACCTCGCAGTCCAACGAATCCTCGCCACCTCGCTGTCGGAATAACGGAGAGTCGCAAGGAAATTCCAGGAATAACGGAGAAGCTCGTGAGGGTGAAACTCGTGCGGCATCAGTAAATAGTCAACATCCACCTGGAACTAATTGGAGCTTCGAAGAACAATTCAGACAGTTGTATGAGCTGGATGATACCCCTGAACGGAAGGTATTCCTTGACGACCTCTTTACTTTCATGCAGAGTAGAGGTACACCCATTAGCCGCCTGCCCATCATGGCAAAATCCGTATTGGATCTCTATGAGCTTTACAAGTTAGTAGTATTACGAGGTGGACTGGTCGAGGTAATCAACAAGAAGCTGTGGCAGGAAATTATCAAAGGCCTTCGACTACCAGCGAGCATCACTTCCGCCGCGTTTACTTTGCGAACTCAGTACATGAAATATCTGTATCCGtatgagaaagagaaggagggGCTATCGACCCAGGAACAACTCCAGACGGCGATCGAGACAAATCGTCGCGAAAGCCGCAGGAATAATTACGCGGCTTACCCTGACAATCAAGTATCACGAAACCAGCACAACTCGCTGCCACCGAATCCAATGCCGTTGCCGCTCTCCATCGCTCAAATGGCGGTGGCCGCGAATGAATCGCAGCATCATGTCGTAAATGGACATCCACACGGTCCGCAACATCATCCTCAACATCTTCCACCAAATCTGGGTAATCTTCCGCCTAATCAGCTTTCAGACTATATGCTGAGGATATTGAGAGACAGAAACACAATGTCCAACAATCCGATAATTCAAGGTAGCACATCGACACCGCCACCAGCAATGGCAGAGGGATTTAAAACCGGATTGCATTTATGGAATATGTACAGTCcaggtaataataatatgtatccAGGGGCACAACCTTTCTCTCCATCATCGTCTCACTCGCCATTAGCACCAGCAAATAGTCCTGAACCACAGAGGGAAGCCTTAGATCTCGCAAACTCTGGAAACAGTAGATCCGTCGGATCACCGTCATTCGGAGGAGAGTTGAAGAGAAATCAAGAGGCTGTCGAACTCTCATCTCCAACGTCCTCCACTAAAAGAATGTTTTTACCCGATGTGGAAGTAAATAACATGGTGCATTCCTTGCGTATTAGACAAATGGTTAGCACTCGAGatcCTACAAGACGAAGAGAATTAGAAATTAGTGTAGATATTGATGGTATTTTGTATGAAGGCGTCCTGGCAGTTAAACAGGAAGGCAGTAGTAATGGCAGTACCTCGTCGAGCCCCGATAATAATGGAAAACGGACACAAAATAACGAATCATGA
- Protein Sequence
- MDTADEQDLENPGGGSMANGANGTNGTNGANGQHQTPEGSLYQEEKSEDESDMEDETQDEEDLLSPPLQVNPQALDAAAGASSLAHLSNLMNHPQLLTKFRLEHTEADMLQGRNSLEVLQAAMSSGNFGLFPPLYMSSPPPPPPPPPSLPSQSSQNNHSQIAGSLGNQIGDQALACSTTSSRPASTSQSNESSPPRCRNNGESQGNSRNNGEAREGETRAASVNSQHPPGTNWSFEEQFRQLYELDDTPERKVFLDDLFTFMQSRGTPISRLPIMAKSVLDLYELYKLVVLRGGLVEVINKKLWQEIIKGLRLPASITSAAFTLRTQYMKYLYPYEKEKEGLSTQEQLQTAIETNRRESRRNNYAAYPDNQVSRNQHNSLPPNPMPLPLSIAQMAVAANESQHHVVNGHPHGPQHHPQHLPPNLGNLPPNQLSDYMLRILRDRNTMSNNPIIQGSTSTPPPAMAEGFKTGLHLWNMYSPGNNNMYPGAQPFSPSSSHSPLAPANSPEPQREALDLANSGNSRSVGSPSFGGELKRNQEAVELSSPTSSTKRMFLPDVEVNNMVHSLRIRQMVSTRDPTRRRELEISVDIDGILYEGVLAVKQEGSSNGSTSSSPDNNGKRTQNNES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00016482;
- 90% Identity
- iTF_01475971; iTF_00181107; iTF_00181761;
- 80% Identity
- -