Basic Information

Insect: Atta cephalotes
Gene Symbol: retn
Assembly: GCA_000143395.2
Location: NW:272820-392328[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1e-25 1.8e-22 78.8 0.0 2 89 255 340 254 340 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1e-25	1.8e-22	78.8	0.0	2	89	255	340	254	340	0.96

Sequence Information

Coding Sequence: ATGGACACTGCCGACGAGCAAGATATAGAGAATCCAGGTGGAGGCTCCATGGCCAACGGCGCCAACGGAACCAATGGCACAAATGGAGCCAATGGTCAACACCAGACGCCGGAGGGTTCTTTGTATCAGGAAGAGAAGTCGGAAGATGAATCAGATATGGACGATGAAACACAAGATGAAGAAGACTTACTCTCACAGTCACTTCAAGTCAATCCACAAGCTTTGGATGCAGCTGCAGGTGCATCTTCATTAGCACAGTTGAGCAATTTAATGAACACGCATCATCCACAGTTACTAGCGAAATTTAGATTGGAGcataCCGAGGCAGATATGTTACAAAGTAGAAATAGTTTAGAGGTTCTACAGGCTGCAATGACCAGTGGTAACTTCGGTACCTTATTTCCACCTTTATACATATCGTcgccgccaccaccgccgccaccaccgccaTCATTATCATCACAACCGTCGCAAAACAACCATTCACAAATCGCAGGAAGTCTCGGGAATCAAATCGGTGAAAATCAAGCATTAGCTTGCTCCACTACTTCCACCAGACCTGTTGCCACCTCACAGTCTAACGAATCGTCGCCACCTCGCTGCCGGAATAACGGAGAGTCGCAAGGAAATTCCAGGAATAACGGAGAAGCTCGTGAGGGTGAAACTCGTGCGGCATCAGTAAATAGTCAACATCCACCTGGAACTAATTGGAGCTTCGAAGAACAATTCAGACAGtTGTATGAGCTGGATGATACCCCTGAACGGAAGGTATTCCTTGACGACCTCTTTACTTTCATGCAGAGTAGAGGTACACCCATCAGCCGACTTCCCATCATGGCAAAATCCGTATTGGATCTTTATGAGCTTTACAAGTTAGTAGTATTACGAGGTGGACTGGTCGAGGTAATTAACAAGAAGCTGTGGCAGGAAATTATCAAAGGACTTCGCCTACCAGCAAGCATCACTTCCGCCGCGTTTACTTTGCGAACTCAGTACATGAAATATCTGTATCCAtacgagaaagagaaggagggaCTATCGACCCAAGAACAACTCCAGACGGCGATCGAGACAAATCGTCGCGAGAGTCGCAGGAACAATTACGCGGCTTACCCTGACAATCAAGTACCGCGAAACCAGCACAACTCGCTGCCGCCAAATCCAATGCCGTTGCCGCTCTCGATCGCCCAAATGGCGGTGGCTGCGAACGAATCGCAACATCATGTCGTAAATGGACATCCACATGGTCCGCAACATCATCCGCAACATCTTCCACCAAATCTGGGTAATCTTCCACCTAATCAGCTTTCAGATTATATGCTGAGGATATTGAGAGACAGAAACACAATGTCCAACAATCCGATGATTCAAGGTAGCACACCGACACCGCCACCAATGACAGAGGGATTTAAATCCGGACTGCATTTATGGAATATGTACAGTCcaggtaataataatatgtatccaGCAGCCCAACCTTTCTCTCCATCATCGTCTCACTCACCATTAGCACCGGCAAATAGTCCTGAACCACAGAGGGAAGCCTTAGATCTCGCAAATTCTGGAAATAGTAGATCCATTGGTTCACCATCATTTGGAGGAGAGTTGAAGAGAAATCAAGAGCCTGGTGAACTTTCATCTCCAACGTCTTCTACTAAAAGAATGTTCTTatccgatgttgaaggaaataACATGGTGCATTCCTTGCGTATTAGACAAATGGTTAGCACTCGCGatcCTACAAGACGAAGAGAATTAGAAATTAGTGTAGATATTGATGGTATTTTATATGAAGGTGTCCTGGCAGTTAAACAGGAAGGCAGTAGTAATAATGGCAGTACCTCGTCGAGCCCCGATAATAATGGAAAACGGACACAAAATAACGATTCATGA
Protein Sequence: MDTADEQDIENPGGGSMANGANGTNGTNGANGQHQTPEGSLYQEEKSEDESDMDDETQDEEDLLSQSLQVNPQALDAAAGASSLAQLSNLMNTHHPQLLAKFRLEHTEADMLQSRNSLEVLQAAMTSGNFGTLFPPLYISSPPPPPPPPPSLSSQPSQNNHSQIAGSLGNQIGENQALACSTTSTRPVATSQSNESSPPRCRNNGESQGNSRNNGEAREGETRAASVNSQHPPGTNWSFEEQFRQLYELDDTPERKVFLDDLFTFMQSRGTPISRLPIMAKSVLDLYELYKLVVLRGGLVEVINKKLWQEIIKGLRLPASITSAAFTLRTQYMKYLYPYEKEKEGLSTQEQLQTAIETNRRESRRNNYAAYPDNQVPRNQHNSLPPNPMPLPLSIAQMAVAANESQHHVVNGHPHGPQHHPQHLPPNLGNLPPNQLSDYMLRILRDRNTMSNNPMIQGSTPTPPPMTEGFKSGLHLWNMYSPGNNNMYPAAQPFSPSSSHSPLAPANSPEPQREALDLANSGNSRSIGSPSFGGELKRNQEPGELSSPTSSTKRMFLSDVEGNNMVHSLRIRQMVSTRDPTRRRELEISVDIDGILYEGVLAVKQEGSSNNGSTSSSPDNNGKRTQNNDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00016482;
90% Identity: iTF_01477361;
80% Identity: -