Tzet006801.1
Basic Information
- Insect
- Trachymyrmex zeteki
- Gene Symbol
- Bgb
- Assembly
- GCA_001594055.1
- Location
- NW:164113-180246[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-84 1.2e-80 268.3 0.1 1 161 34 191 34 197 0.97
Sequence Information
- Coding Sequence
- ATGATGCACGCAATGAGCGAGCATGCGGGGGTGGGTGTGTTGCCGTTCGACGGAATGGGCCTGTACGAACAGCCGCGACCACCCCGGCTCGTCTTCAAGATGCCGCGCGTTGTGCCCGATCAGAAGGCCAAGTTTGAGAGCGATGAGCTGTTCAGAAGGTTGAGTCGCGAAAGCGAGGTGAGATACACTGGATACAGAGATCGGCCGATTGAAGAACGTCAAGTACGTTTTCAAAATGGCTGTCGGGAAGGCCACACAGAGATCGCATTTGCGGCAACGGGCACCAACCTCCAGCTTGTTTTCGGCAACGCATCTGGAAACTACCCTGTCGATCCCAATGATTGTGACTTTGACAAGGAACACGGCAAGGTACACCTGCGCTCGCATTTGATCATGAACGGTGTGTGCGTGAGGTGGCGGGGTTGGATCGACCTGGAGCGACTGGACGGCGTCGGCTGCCTCGAGTATGACGAGGAACACGCCGCTGAAGAGGACGCGTTGCTACGTGATCAGCTCGAGCGTTACAATCAACGACTGCGTGATTTCGAGGAGAAGCAACGTACCTATCGGAGTGGACCAGCATCGGCCGCACAACCGCCGCATCTTAATCATCACTATCACCACGACACACACCATGCGACCAGCcaccatcatcatcatcacgGCCACCATAGCCGACACGTGGGCGGTGCAGGTGCCACCGGTGCCACCGCGACCGGCATCGAGCCTCACTTGCCTCACCGCCAGGATCCCGAGATGGAGGTGCGACTGCGAGCCTTCTGA
- Protein Sequence
- MMHAMSEHAGVGVLPFDGMGLYEQPRPPRLVFKMPRVVPDQKAKFESDELFRRLSRESEVRYTGYRDRPIEERQVRFQNGCREGHTEIAFAATGTNLQLVFGNASGNYPVDPNDCDFDKEHGKVHLRSHLIMNGVCVRWRGWIDLERLDGVGCLEYDEEHAAEEDALLRDQLERYNQRLRDFEEKQRTYRSGPASAAQPPHLNHHYHHDTHHATSHHHHHHGHHSRHVGGAGATGATATGIEPHLPHRQDPEMEVRLRAF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394046;
- 90% Identity
- iTF_00181091; iTF_01355078; iTF_00125674; iTF_00181744; iTF_00016465; iTF_00417329; iTF_01475956; iTF_00015162; iTF_01406267; iTF_01476700; iTF_01228161; iTF_01261639; iTF_00015820; iTF_00014496; iTF_01421324; iTF_01270273; iTF_01268036; iTF_01266662; iTF_01268774; iTF_01267311; iTF_01270961; iTF_01269562; iTF_00452360; iTF_00264777; iTF_01086987; iTF_00769400; iTF_01098963; iTF_00279733; iTF_00280419; iTF_01519998; iTF_01523135; iTF_00898529;
- 80% Identity
- iTF_00181091; iTF_00181744; iTF_00016465; iTF_00417329; iTF_01475956; iTF_00015162;