Ppal007882.1
Basic Information
- Insect
- Pseudomyrmex pallidus
- Gene Symbol
- Bgb
- Assembly
- GCA_014825455.1
- Location
- QVNV01014185.1:5293-11908[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-83 8e-79 263.4 0.5 1 163 34 193 34 197 0.97
Sequence Information
- Coding Sequence
- ATGATGCACGCAATGAGCGAGCATGGCACTGTTGGCGTAATACCGTTCGATGGAATGGGTCTGTACGAACAACCGCGACCAACTCGCTTAGTCTTCAAGATGCCACGAGTCGTGCCGGATCAGAAGTCCAAGTTCGAGAGCGACGAGCTCTTTAGGAGATTGAGTCGCGAGAGCGAAGTGAGATACACAGGCTACAGAGACCGGCCAATCGAGGAGCGACAAGTACGATTTCAAAATGGCTGTCGCGAGGGTCGTACAGAGATTGCGTTTGCGGCAACGGGTACCAATCTTCAGCTTGTTTTTGGCACCGCGTCTGGAAATTACGCTGTCGACCCGTTGGACTGTGATTTCGAGAAAGAACACGGCAAAGTGCACTTGCGCTCGCATTTGATCATGAACGGCGTTTGCGTGAGGTGGCGAGGTTGGATTGACTTGGAGCGTCTGGACGGCGTCGGTTGCTTAGAATACGACGAAGAGAATGCCATCGAGGAAGACAGGCTGCTGCGGGAACAACTGGAACGTTACAACCAACGATTGCGCGAGTTTGAGGAGAAGCAGCGAGTTTTCCGTACTGGAGCGGCGGCCGCGGCGCAACCGCCTCATTTGAATCACCACTATCACCATGACACTCACCATGCTGCCAGTCATCACCATCATCACCACGGTCACCATAGCCGGCACGTGGGTGGCGCGGGTGCGACCGGCGCCACCGCCACAGGAATCGAGCCTCACCTGCCGCATCGCCAGGATCCCGAGATGGAAGTGCGACTGCGGGCTTACTGA
- Protein Sequence
- MMHAMSEHGTVGVIPFDGMGLYEQPRPTRLVFKMPRVVPDQKSKFESDELFRRLSRESEVRYTGYRDRPIEERQVRFQNGCREGRTEIAFAATGTNLQLVFGTASGNYAVDPLDCDFEKEHGKVHLRSHLIMNGVCVRWRGWIDLERLDGVGCLEYDEENAIEEDRLLREQLERYNQRLREFEEKQRVFRTGAAAAAQPPHLNHHYHHDTHHAASHHHHHHGHHSRHVGGAGATGATATGIEPHLPHRQDPEMEVRLRAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394046;
- 90% Identity
- iTF_01477345;
- 80% Identity
- iTF_01268036;