Tcor000415.1
Basic Information
- Insect
- Trachymyrmex cornetzi
- Gene Symbol
- XBP1
- Assembly
- GCA_001594075.1
- Location
- NW:5835486-5839908[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-12 7e-10 38.2 17.1 2 60 86 144 86 145 0.95 2 2 4.4e-05 0.025 14.0 1.5 35 63 140 168 137 170 0.90
Sequence Information
- Coding Sequence
- ATGAGCTCCGTGAAGAGTGTCATCATCACCCTGCCTAAGGGAGTGCCCAAGGCGATCCCGAGGACCGAATCGTCACGCAACTCGCTACCTAAGCTGAACTTCACGTCAATCCTGGTGGACAAGGCAAGGATGGACAGCAGGAAGGTCGTCTCTGATCAGCAGGAAGAGATGCGCGATGACGACGTCGCGACGCTCCTCGAGCCCGTGGACACCCGCGTACGTGGAAAGAAACGCCGACTGGATCATCTAACGTGGGAGGAGAAGTTGCAACGAAAAAAATTGAAGAATCGAGTGGCCGCTCAAACCTCGCGAGATCGCAAAAAAGCCAGATTGGACGAGCTCGAGGAAACAGTGAGGGCACAGAAGGAAAGGAATGAACTACTTACACAGGAATGTGCGATGCTGAGGTCGCAGAACGAATTGCTAACGTCGCAGAACGAATGGCTGTTGAACGAAAATAAGAGGCTTAGAAACGAGAGAGACGCAGTGAGGAACACGCTCACAGATCAGCAACAACCGATCTGCTCCGCCTGTCGGACTCGTGTCGACGGTGCTGTACCTTCGCTGGGATCTGCAGTATCCCCCAATGACCCTCTGCCGCAGGGTGGGACAGCACAGTCGGCATTGCGCCCGACGCGGACGCCAGGAGCAACCGCGCTGCTGAAATTTCTGACTCTATACTTCCTTTTGAAGAATTGTTCAGCGTATTCCAAAGCGCCGACGCCGAACGATTCGAAGAGCTGGCGGAGAGCCTCTTACGAGAAGTCAGTCCAGAGGTTGAAGCAAATCCTCATAGATCAAATGAACAAGTGAGTCTCGGGAATGCAGAGATGGATGAAATATTCCGAAGTAGAATGGAATTCTAAGGTGTCCGTCAACGAAGCTCCCGTTGAAAAACCTGACCATCCAGAGGCATTGGTGGGGCAGACATCAAAAAATGTGGAAGCCAGTAGAACTGGTGGAAGCATAGACAGCGTATCCTCTTATCTACGAGATACATCCAATTGGTTTCTCGAGGACTGCGACACAACGAAGACCACGTCTATCAAGATCGAGGCTGAAATCAAACAGGAGTCTGAGACGGCATCGGATCTCGATACTGTCTATGGTACATACGACGAGACCACCAACTCCATCACAATTATGTATCCGGGTGAGGAGAACGACGGCTGCGTGGGTATCCAGGAATGCGTGCAAGAGGTGGTCAGTAGTAACGAGAGCGGTGCCGTCAGCCATGCCGCAGACGACGCTGTTCCTTCATCGGGCATTCAATTGCGCTATCCGGCGCAATTCTCACCGGCATACACCAATTCCATGTCACCTGCTATGAGCGACGTGGACAGCTACGGTATTTCCTCGACGAAGCAGCTGGATTGCGCCAGTTTATCGGACGGTGGATACGAATCTCACGATTCCCCGCAGTCACACATGTCGGAATTGTTCGATCTCGAAAGTTTCAGCGAGCTGTTTCCTACGTTGGGCTGA
- Protein Sequence
- MSSVKSVIITLPKGVPKAIPRTESSRNSLPKLNFTSILVDKARMDSRKVVSDQQEEMRDDDVATLLEPVDTRVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKARLDELEETVRAQKERNELLTQECAMLRSQNELLTSQNEWLLNENKRLRNERDAVRNTLTDQQQPICSACRTRVDGAVPSLGSAVSPNDPLPQGGTAQSALRPTRTPGATALLKFLTLYFLLKNCSAYSKAPTPNDSKSWRRASYEKSVQRLKQILIDQMNK*VSGMQRWMKYSEVEWNSKVSVNEAPVEKPDHPEALVGQTSKNVEASRTGGSIDSVSSYLRDTSNWFLEDCDTTKTTSIKIEAEIKQESETASDLDTVYGTYDETTNSITIMYPGEENDGCVGIQECVQEVVSSNESGAVSHAADDAVPSSGIQLRYPAQFSPAYTNSMSPAMSDVDSYGISSTKQLDCASLSDGGYESHDSPQSHMSELFDLESFSELFPTLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01261630;
- 90% Identity
- iTF_00181733; iTF_00417318; iTF_01477339; iTF_01261630; iTF_00015812;
- 80% Identity
- -