Basic Information

Gene Symbol
Xbp1
Assembly
GCA_017607565.1
Location
JAANIB010010543.1:432236-435993[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-12 5.2e-10 38.2 18.0 2 60 86 144 86 145 0.95
2 2 4e-05 0.019 14.0 1.5 35 63 140 168 137 170 0.90

Sequence Information

Coding Sequence
ATGAGCTCCGTGAAGAGTGTCATCATCACCCTGCCTAAGGGAGTGCCCAAGGCGATCCCGAGGACCGAATCGTCGCGCAACGCGCTACCTAAGCTGAACTTTACGTCAATCCTGATGGACAAGGCAAGGATGGACAGCAGGAAGGTCGTCTCTGATCAGCAAGAGGAGACGCGCGATGACGACGTCGCGACGCTCCTCGAACCCGTGGACACCCGCGTACGTGGAAAGAAACGCCGGCTGGATCATTTAACGTGGGAGGAGAAATTACAACGAAAAAAACTGAAGAATCGAGTGGCCGCTCAAACCTCGCGAGATCGCAAAAAAGCCAGATTGGACGAGCTTGAGGAAACAGTGAGGACACAGAAGGAAAGGAATGAGTTACTTAAACAGGAATGTGCGATGCTCAGGTCGCAGAACGAACTGCTGACGTCACAGAACGAATGGCTGTTGAACGAAAATAAGAGGCTTAGAAACGAGAGAGACGCAGTAAGGAACACGCTCACAGATCAACAACAACCGATCTGCTCCGCCTGTCGGACCCGTGTCGATGGTGCTGTATCTTCGCTGGGATCTGCAGTATCCCCCAATGACCCTCTGCCGCAGGGTGGGACAGCACAGTCGGCATTGCGCCCGATTCGGACGCCAGGAGCAACCGCGCTGCTGAAATTTCTGACTCTATACTTCCTTTTGAAGAATTGTTCAGCGTATTCCAAAGCGCCGACGCCGAACGATTCGAAGAGCTGGCGGAAAGCCTCTTACGAGAAGTCAGTCCAGAGGTTGAAGCAAATCCTCATAGATCAAATGAACAATCGTTCTCTCTTAATGACCTGTCGATCGCTCTTCATTCCACAGGTGTCCGTCAACGAAGCTCCCGTTGAAAAACCTGACCATCCAGAGGCATTGGTGGGGCAGACATCAAAAAATGTGGAAGCCAGTAGAACTGGTGGAAGCATAGACAGCGTATCCTCTTATCTACGAGATACGTCCAATTGGTTTCTCGAGGACTGCGACACAACAAAGACCACGTCTATCAAGACCGAGACTGAAATCAAACAGGAGTCTGAGACGGCATCGGATCTCGATACTGTCTATGGTACATACGACGAGACCACCAACTCCATCACGATTATGTATCCGAGTGAGGAGAACGACGGCTGTGTGGGTATCCAGGAATGTGTGCAAGAGGTGGTCAGTAGTAACGAGAGCGGTGCCATCAGTCATGCCACAGACGACGCTGTACATCTCACTGTTCCTTCATCGGGCATTCAATTGCGCTATCCGGCGCAATTCTCACCGGCATACACCAATTCTATGTCACCTGCTATGAGCGATGTAGACGGTATTTCCTCGACAAAGCAGCTGGATTGCGCCAGTTTATCGGATGGTGGATACGAATCTCACGATTCCCCGCAGTCACACATGTCGGAATTATTCGATCTCGAAAGTTTCAGCGAGCTGTTTCCCACGTTGGGC
Protein Sequence
MSSVKSVIITLPKGVPKAIPRTESSRNALPKLNFTSILMDKARMDSRKVVSDQQEETRDDDVATLLEPVDTRVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKARLDELEETVRTQKERNELLKQECAMLRSQNELLTSQNEWLLNENKRLRNERDAVRNTLTDQQQPICSACRTRVDGAVSSLGSAVSPNDPLPQGGTAQSALRPIRTPGATALLKFLTLYFLLKNCSAYSKAPTPNDSKSWRKASYEKSVQRLKQILIDQMNNRSLLMTCRSLFIPQVSVNEAPVEKPDHPEALVGQTSKNVEASRTGGSIDSVSSYLRDTSNWFLEDCDTTKTTSIKTETEIKQESETASDLDTVYGTYDETTNSITIMYPSEENDGCVGIQECVQEVVSSNESGAISHATDDAVHLTVPSSGIQLRYPAQFSPAYTNSMSPAMSDVDGISSTKQLDCASLSDGGYESHDSPQSHMSELFDLESFSELFPTLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01261630;
90% Identity
iTF_01475947;
80% Identity
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