Acoo002653.1
Basic Information
- Insect
- Atta colombica
- Gene Symbol
- XBP1
- Assembly
- GCA_001594045.1
- Location
- NW:570160-574683[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1e-12 4.9e-10 38.4 16.5 2 60 86 144 86 145 0.95 2 3 4.5e-05 0.021 14.0 1.5 35 63 140 168 137 170 0.90 3 3 9.6 4.6e+03 -3.1 0.0 50 61 252 263 249 265 0.57
Sequence Information
- Coding Sequence
- ATGAACTCCGTGAAGAGTGTCATCATCACCCTGCCTAAGGGAGTGCCCAAGGCGATCTCGAGGACCGAATCGTCGCGCAACTCGCTACCTAAGCTGAACTTTACGTCAATCCTGGTGGACAAGGCAAGAATGGACAACAGGAAGGTCGTCTCTGATCAGCAAGAGGAGATGCGCGATGACGACGTCGCGACGCTCCTCGAACCCGTGGACACCCGCGTACGTGGAAAGAAACGTCGACTGGATCATTTAACGTGGGAAGAGAAATTACAACGAAAAAAACTGAAGAATCGAGTGGCCGCTCAAACCTCGCGAGATCGCAAAAAAGCCAAGTTGGACGAGCTTGAGGAAACAGTGAGGACACAAAAGGAAAGGAATGAGTTACTTACACAAGAATGTGCGATGCTGAGGTCGCAGAACGAACTGCTAACGTCGCAGAACGAATGGCTGTTGAACGAAAATAAGAGGCTTAGAAATGAAAGGGACGCAGTGAGGAACACGCTCACAGATCAGCAACAACCGATCTGCTCTGCCTGTCGGACTCGTGTCGACAGTGCTGTACCTTCGCTGGGATCTGCAGTATCCCCCAATGACCCTCTGCCGCAGGGTGGGACAGCACAGTCGGCATTGCGCCCGACGCGGACGCCAGGAGCAACCGCGCTGCTGAAATTTCTGACTCTATACTTCCTTTTGAAGAATTGTTCAGCGTATTCCAAAGTGCTGACGCCGAACGATTCGAAGAGCTGGCGGAGAGCCTCTTACGAGAAGTCAGTCCAGAAGTTGAAGCAAATCCTCATAGATCAAATGAACAAGTGAGTCTTGAGAATGCAGAGATGGATGAAATATTCCGAAGTAGAATGGAATTCTAAGGTGTCTGTCAACGAAGCTCCCGTTGAAAAACCTGACCATCCAGAGGCATTGGTGGGGCAGACATCAAAAAATGTGGAAGCCAGTAGAACTGGTGGAAGCATAGACAGCGTACCCTCTTTTCTACGAGATACGTCCAATTGGTTTCTTGAGGACTGCGATACAACAAAGACCACGTCTATCAAGACTGAGACTGAAATTAAACAAGAGTCTGAGACGGCATCGGATCTCGATACTGTCTATGGTACATACGACGAGACCACCAACTCCATCACGATTATGTATCCGGGTGAGGAGAACGACGGCTGTGTAGGTATTCAGGAATGCGTACAAGAGGTGGTCAGTAGTAACGAGAGCGGTGCCGTCAGTCATACCACAGACGACGCTGTACATCTCACTGTTCCTTCATCGGGCATTCAATTGCGTTATCCGGCGCAATTCTCACCGGCATACACCAATTCTATGTCACCTGCTATGAGCGACGTAGACAACTACGGTATTTCCTCGACGAAGCAATTGGATTGCGCCAGTTTATCGGACGGTGGATACGAATCTCACGATTCCCCGCAATCACACATGTCGGAATTGTTCGATCTCGAAAGTTTCAGCGAGCTGTTTCCCACGTTGGGCTGA
- Protein Sequence
- MNSVKSVIITLPKGVPKAISRTESSRNSLPKLNFTSILVDKARMDNRKVVSDQQEEMRDDDVATLLEPVDTRVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRTQKERNELLTQECAMLRSQNELLTSQNEWLLNENKRLRNERDAVRNTLTDQQQPICSACRTRVDSAVPSLGSAVSPNDPLPQGGTAQSALRPTRTPGATALLKFLTLYFLLKNCSAYSKVLTPNDSKSWRRASYEKSVQKLKQILIDQMNK*VLRMQRWMKYSEVEWNSKVSVNEAPVEKPDHPEALVGQTSKNVEASRTGGSIDSVPSFLRDTSNWFLEDCDTTKTTSIKTETEIKQESETASDLDTVYGTYDETTNSITIMYPGEENDGCVGIQECVQEVVSSNESGAVSHTTDDAVHLTVPSSGIQLRYPAQFSPAYTNSMSPAMSDVDNYGISSTKQLDCASLSDGGYESHDSPQSHMSELFDLESFSELFPTLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01261630;
- 90% Identity
- iTF_01475947;
- 80% Identity
- -