Basic Information

Gene Symbol
BAS1_1
Assembly
GCA_030142635.1
Location
JARQTJ010000420.1:2329566-2332340[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.12 1.1e+02 3.2 0.0 3 18 177 192 176 193 0.93
2 6 4.7 4.1e+03 -1.9 0.0 22 42 246 268 240 269 0.72
3 6 2.3e-10 1.9e-07 31.2 0.3 1 44 278 323 278 324 0.95
4 6 4.4e-11 3.8e-08 33.4 0.3 3 43 334 378 332 381 0.95
5 6 1.8e-13 1.6e-10 41.1 0.0 1 45 387 432 387 433 0.97
6 6 7.1e-15 6.1e-12 45.6 0.1 3 42 442 481 440 485 0.95

Sequence Information

Coding Sequence
ATGAGTGATTCAGAGGACTATACTCTTTTGGATGATATAAAAGCTTTGGAAAATGCATTGGCACAAAAGAATCAGTCGCCGTCGACCTCAACGAGTACAACGACAGAAAACGTTTTGTCTAACCTTTATGAGAAAAGGAATTCTCTTACTATAACACAAGAGACACAAGATGATTCTGCCTCGAACAGTTCATTCTGCATTGACGAAACTGGTCTTGACATTGAAAACTTGAATGCATTGGATGATGTTCAAGCAGCACTTCTTCTTAACAAGCAGTTGATTACCTCTTTGCAAGCTGCAAAGATGAAGTTTACAACTCTACTTGAGGAATgtcgaaaaaggaaagaatatgTTGAGCAGAGAATTTTGCAGACTGGAAAGTCCAGTTCTGCTTCAAAAATCACATTCTGTAATGCTGGCATGCCATACTTCAAAGACAAGGCTCGTTTCATTGCACCGATGAATGAAGAtgccaagaaaaagaaagcgtCTGGTGAGTTACAGATTGTTCATCTTCCCATTGTTTGTCGGTGGACTCCTAAAGATAGACATACTCTCATCAATGCAATCAAACAAGAGGCCATAACGGATGTTTTAAGTAACAAAAAGCTACCAGGCAAAAGGAAAGTTTCTCATCGTAAGATGACCAGTGCACAAAGAATAGCAGAAGAAAAGGCAAATTTGTTGCCTAAATGTTTTCAGGACACTGTTGGACCTTTGGGTGCCAGAGAATTTGACTGGTTGAAAATTGCTGCAACTGATTTTGAAGGGAGGCACTCAGCTGAAGAGTGTCGTGTGATGTGGAATATATTCTTACATCCTGATATCAATAAGACAAAATGGTCTAAGGCGGAAGACGCGCATTTGAAGCAACTTGCTGAgcagtataattttgaaaactggGATGAGATTGCcttgaaattaaaaactcGGAGATCAGGCTACCAATGTTTCATTAGGTTCAACACTACCAACCGTCAATTTGGATTTAAGGGATGTCAGtggagaaaggaagaggatCAAAGACTTGTGGATGCTGTAAATAAGCTAAGGCATGGAGACTATATTCCTTGGGGTGAAGTTGCTAGTTGCATGCATAACAGAACAAAGCAACAGGTGTACTTTCGGTGGACCTACAGTTTGGCACCACATTTAAAAAAGGGTCGATTCACAGCAACAGAAGACAAAATCTTGATGAACGCTGTAGCAAAGTATGgaaagaattttggaaaaatagtAGCTCTTTGCATGCCTAACAGAACTACAGTTCAGCTTAGTGACCATTACCAAACTCTAGTCGTGAGAGAAAGTGGGAACCAGAATACTTGGAGTCTCGAGGAGGATGTACAACTTATCAAACTTCATGTACAATATGGTTCAAATTGGGTAAGGATTGCTAAGCACTTCCCCACGAAGACCAGGATTCATGTTAGACATAGATTTTCTGCTCTTCTTCGATATCAGAGGAAGGGTGTTTCCTTGAAAGATATTCCACGCACGTACCATGGACATTTATCTGCAACGGAAATATTTCCTCTagaggagaagaaaattgaTGAAGAGAATGTTGAAATAGCTGAAGATGAAACGGATATTGACTCACAGCTTCTACTCTATTTTAAAGAAGTAGCATCTCCATCGAAACCCGATGAAACGAGAAAGTCATATAGCTCAGATGAAATTAtgttgaaaattccaaaactgTATGACATCCTACAGAGTTTAAATGCTAATCTCGTTATTTCTGAAAGTCCCCATACACAgtctttatctttaaaaactaaacaatTGCTGCTTGCCTTAAAGGTGTATGGCGAATCGAAAGCAAGAGAAGTTGCAAAACGTCGTGAAAGCGTAAAAGCTGTACAGCAAAGGATGTTTGGCAAGGAACACAACTCAGACACCTACAACCGTTTTGTACCACCATTGCCATTCAATATGATATccaaaacgaaaaaaccaaTTCACAATAAAACTTTAGAATATGAATTAAACACTGACGAACAATTTTCTGCAGAAGTGAACATGCAACTAGAAACTcctgaaaatgtaatttctatGATAGGCATTAGTTCGTATCTGGAGTTTGAAAAAGTTACTCGGATCTTAATTGGATCGAGTagaaaaatagagaagcaaagtgtcgtaaaaaaaatttacattctaCCTCCACAGCAAAAGGTTAATAATTCGAGTGGGACAAAAAGATATGTAGAAAATTGCAGTAAAGATGCTGAGAAGAGGCTCCAAATAATGTCATCTCCGAAAGATCCTAGCATTTCTGGTATTTCACTCGAATCAAGTACAAAGGATGTAAGTCAATCAGCTGAAGCACCATGGCTacgaatatttcaagaaacaTTGCCATCAGCTTATTCGATATTGGAACCAAATTATTCAACAATATTTGGATTTCGCAATATACTTTCGTCAAAACAAATGTCAGACGTAGACGACGAAGCTGTAGACGAACAAAGAAAGAGGCTCAAATATCAACCGGATGGCCATAGAGCTTTCGAGCTATTGAAGCAACGGCTTTTAAAGTTGTTCAAAGTTCCAGTAGGCATGTCCCAAATTCTTCCACCCGAAATACACGGtggagagaaaatatttttatcctaCGCAGAAAATGTGCTGAAAAGTAACTTAAAaactaaaagtaaaaaagtcgTACCTAAAAAATCAGGTAAAACCGAAAAGGAACCACGTGTTAAGAAGGAAAGAATCGATAATCCAAGTGAAACTGTACGCAGCTTAGATATAATTGACgattag
Protein Sequence
MSDSEDYTLLDDIKALENALAQKNQSPSTSTSTTTENVLSNLYEKRNSLTITQETQDDSASNSSFCIDETGLDIENLNALDDVQAALLLNKQLITSLQAAKMKFTTLLEECRKRKEYVEQRILQTGKSSSASKITFCNAGMPYFKDKARFIAPMNEDAKKKKASGELQIVHLPIVCRWTPKDRHTLINAIKQEAITDVLSNKKLPGKRKVSHRKMTSAQRIAEEKANLLPKCFQDTVGPLGAREFDWLKIAATDFEGRHSAEECRVMWNIFLHPDINKTKWSKAEDAHLKQLAEQYNFENWDEIALKLKTRRSGYQCFIRFNTTNRQFGFKGCQWRKEEDQRLVDAVNKLRHGDYIPWGEVASCMHNRTKQQVYFRWTYSLAPHLKKGRFTATEDKILMNAVAKYGKNFGKIVALCMPNRTTVQLSDHYQTLVVRESGNQNTWSLEEDVQLIKLHVQYGSNWVRIAKHFPTKTRIHVRHRFSALLRYQRKGVSLKDIPRTYHGHLSATEIFPLEEKKIDEENVEIAEDETDIDSQLLLYFKEVASPSKPDETRKSYSSDEIMLKIPKLYDILQSLNANLVISESPHTQSLSLKTKQLLLALKVYGESKAREVAKRRESVKAVQQRMFGKEHNSDTYNRFVPPLPFNMISKTKKPIHNKTLEYELNTDEQFSAEVNMQLETPENVISMIGISSYLEFEKVTRILIGSSRKIEKQSVVKKIYILPPQQKVNNSSGTKRYVENCSKDAEKRLQIMSSPKDPSISGISLESSTKDVSQSAEAPWLRIFQETLPSAYSILEPNYSTIFGFRNILSSKQMSDVDDEAVDEQRKRLKYQPDGHRAFELLKQRLLKLFKVPVGMSQILPPEIHGGEKIFLSYAENVLKSNLKTKSKKVVPKKSGKTEKEPRVKKERIDNPSETVRSLDIIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2