Basic Information

Gene Symbol
BAS1
Assembly
GCA_030142265.1
Location
JARQSU010000385.1:2240371-2243151[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.12 1.1e+02 3.2 0.0 3 18 177 192 176 193 0.93
2 6 4.5 4e+03 -1.9 0.0 22 42 246 268 240 269 0.72
3 6 1.5e-09 1.3e-06 28.5 0.4 1 44 278 323 278 324 0.95
4 6 3.1e-11 2.7e-08 33.9 0.3 3 43 334 378 332 381 0.95
5 6 1.8e-13 1.5e-10 41.1 0.0 1 45 387 432 387 433 0.97
6 6 6.8e-15 6e-12 45.6 0.1 3 42 442 481 440 485 0.95

Sequence Information

Coding Sequence
ATGAGTGATTCAGAGGACTATACTCTTTTGGATGATATAAAAGCTTTGGAAAATGCTTTGGCACAAAAGAATCAGTTGCCGTCGACCTCAACAAGTACAACGACGGAAAACGTTTTGTCTAACCTTTATGAGAAAAGGGATTCTCTTACTATAACACAAGAAACACAAGATGATTCTGCCTCGAATAGTTCGTTCTGCATTGACGAAAATGGTattgacattgaaaatttgaatgcaTTGGATGATGTCCAAGCAGCACTTCTTCTTAACAAACAATTGATTAACTGTTTGCAAGCTGCAAAGATGAAGTTTACGACTCTACTTGAGGAATGTCGAAAAAGGAAACAGTATGTTgagcaaaaaattttgcagaCTGCAAAGTCTACTTCTGCTTCAAAAATCACATTCTGTAATGCTGGCATGCCATACTTCAAAGACAAGGCTCGTTTCATTGCACCGATGAATGAAGATGCCAAGATAAAGAAAGCGTCTGGTGAGTTACAGATTGTCCATCTTCCTATTGTTTGCCGGTGGACTCCTAAAGATAGACGTACTCTCATCAATGCAATCAAACAAGAGGCCATAACAGATGTTTTAAGTAACAAAAAGCTACCAGGCAAAAGGAAAGTTTCTCATCGTAAGATGAGCAGTGCACAAAGAATAGCAGAAGAAAGGGCAAATTTGTTGCCTAAATGTTTTCAGGACACTGTTGGACCTTTGGGTGCTAGAGAATTCGATTGGTTGAAAATTGCTGCAACTGATTTTGAAGGTAGGCACTCAGCTGAAGAGTGTCGTGTCatgtggaatatatttttacatccTGATATCAATAAGACAAAATGGTCTAAGGCAGAAGACGGGCATTTGAAACAACTTGCTGAgcagtataattttgaaaactggGACGAGATTGccttgaaattaaaaactcGGAGATCAGGTTATCAATGTTTCATTAGGTTCAACACTACGAACCGTCAATTTGGGTTTAAGGGATGTCAgtggaaaaaggaagaggatcAAAGACTTGTGGATGCTGTAAATAAACTGAGGCATGGAGACTATATTCCTTGGGGTGAAGTTGCTAGTTGCATGCATAATAGAACAAAGCAACAAGTGTACTTTCGGTGGACCTACAGTTTGGCAccacatttaaaaaaaggccGATTCACAGCAACAGAGGACAAAATCTTGATGAATGCTGTAGCAAAGTATGGAAAGAACTTTGGAAAAATAGTAGCTCTTTGCATGCCTAACAGAACTACAGTTCAGCTTAGTGACCATTACCAAACTCTAGTCGTGAGAGAAAGTGGGAACCAGAATACTTGGAGTCTTGAAGAGGATGTACAACTTATTAAACTTCATGTACAATATGGTTCAAATTGGGTAAGGATTGCTAAGCACTTCCCCACAAAAACCAGGATTCATGTTAGACATCGATTTTCTGCTCTTCTTCGATATCAGAGGAAGGGTGTTTCCTTGAAAGATATTCCACGGACGTACCAAGGAAATTTATCTGCAACGGAAATATTTCCTccagaggaaaagaaaattgatgaagaGAATGTTGAAATAGCTGAAGATGAAATAGATATTGACTCACAACTTCTACTCTATTTTAAAGAAGTAGCATCTCCATCAAAACATGATGGAACAAGAAAGTCGTATAGCccaaatgaaattatgttgaaaattccaaaattgtaTAACATCTTACAGAGTTTAAATGCTAATCTCGTTATTCCTGAAACTCTCCATACACAGtctttatctttgaaaaataaacaattgcTGCTTGCCTTAAAGGTATATGGCGAATCGAAAGGAAGAGAAGTTGCAAAACATCGTGAAAGCATAAAAGATGTACAGCAAAGGATGTTTGGCACTGAACACAACTCAGACACCTACAATCATTTTGTACCACCATTGCCATTCAATATGGTGTCCAAAACCAAAAATGCAATTCACAAGAAAACTTTGGAATATGAATTAAACACTGATCAACAATTTTCTGCAGAAGTAAACATGCAACTAGAAACTcctgaaaatgtaatttctatGATAGGCATTAATTTGCATCtagagtttgaaaaaattactcgGATGTTAATTGGATCAACtagaaaaatagagaagcaAAGTGtcatcaaaaaaatttacattctaCCTCCACAGGAAAAGGTTAGTAATTCACAGGGTACAAAAAGACATGTAGAAGATTGCAGTAAAGATAATGGGAAGAAGCTCCAAATAATGTCATCTCCTCCCAAAGATGCTAGCACTTCTGGTATTTCAGTTGAATCAAGCACAAAAGATGTAAGTCAATCAGATGAAGCACCATGGCCACGAATGTTTCAGGAAATATTGCCATCATCAGATTACTCAATATTGGAACCAAATTATTCAACAATATTTGGATTTCGCAATATACTTTCGTCTAAACAAATGTcagacgaagacgacgaagcTGTAGACAAACAAAGAAACAGCCTCAAATATCAACCAGATGGCCGTAGAGCTTTCGAGCTGCTGACGCAACGGCTTGTAAAGTTGTTCAAAGTTCCAGTAGGCATGTCGCAAATTCTACCACCCGAAATACACGGcggagagaaaatatttttgtcctaCGCAGAAAATGTGctgaaaagtaaattaaaaactaaaagtaaaaaagtcgTTCCTAAAAAACCAGGTGCAACCGAAATGGAACCACGTgttaaaaaggaaagaatcgATAATCCAAGTGAAACGGTACACAGCTTAGGTATAATTGATGATTAG
Protein Sequence
MSDSEDYTLLDDIKALENALAQKNQLPSTSTSTTTENVLSNLYEKRDSLTITQETQDDSASNSSFCIDENGIDIENLNALDDVQAALLLNKQLINCLQAAKMKFTTLLEECRKRKQYVEQKILQTAKSTSASKITFCNAGMPYFKDKARFIAPMNEDAKIKKASGELQIVHLPIVCRWTPKDRRTLINAIKQEAITDVLSNKKLPGKRKVSHRKMSSAQRIAEERANLLPKCFQDTVGPLGAREFDWLKIAATDFEGRHSAEECRVMWNIFLHPDINKTKWSKAEDGHLKQLAEQYNFENWDEIALKLKTRRSGYQCFIRFNTTNRQFGFKGCQWKKEEDQRLVDAVNKLRHGDYIPWGEVASCMHNRTKQQVYFRWTYSLAPHLKKGRFTATEDKILMNAVAKYGKNFGKIVALCMPNRTTVQLSDHYQTLVVRESGNQNTWSLEEDVQLIKLHVQYGSNWVRIAKHFPTKTRIHVRHRFSALLRYQRKGVSLKDIPRTYQGNLSATEIFPPEEKKIDEENVEIAEDEIDIDSQLLLYFKEVASPSKHDGTRKSYSPNEIMLKIPKLYNILQSLNANLVIPETLHTQSLSLKNKQLLLALKVYGESKGREVAKHRESIKDVQQRMFGTEHNSDTYNHFVPPLPFNMVSKTKNAIHKKTLEYELNTDQQFSAEVNMQLETPENVISMIGINLHLEFEKITRMLIGSTRKIEKQSVIKKIYILPPQEKVSNSQGTKRHVEDCSKDNGKKLQIMSSPPKDASTSGISVESSTKDVSQSDEAPWPRMFQEILPSSDYSILEPNYSTIFGFRNILSSKQMSDEDDEAVDKQRNSLKYQPDGRRAFELLTQRLVKLFKVPVGMSQILPPEIHGGEKIFLSYAENVLKSKLKTKSKKVVPKKPGATEMEPRVKKERIDNPSETVHSLGIIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00293645;
90% Identity
iTF_01475375;
80% Identity
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