Basic Information

Gene Symbol
BAS1
Assembly
GCA_030142315.1
Location
JARQSX010000462.1:2297496-2300258[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.081 67 3.8 0.0 3 18 177 192 176 194 0.93
2 6 4.9 4e+03 -1.9 0.0 22 42 246 268 240 269 0.72
3 6 6.3e-11 5.1e-08 33.0 0.4 1 44 278 323 278 324 0.95
4 6 6.6e-11 5.4e-08 33.0 0.2 3 43 334 378 332 381 0.95
5 6 4.8e-13 3.9e-10 39.8 0.0 1 45 387 432 387 433 0.97
6 6 4.6e-15 3.7e-12 46.3 0.1 3 42 442 481 440 485 0.95

Sequence Information

Coding Sequence
ATGAGTGATTCAGAGGACTATACTCTTTTGGATGATATAAAAGCTTTGGAAAATGCATTGGCACATAAGAATCAGTCGCCGTCAACCTCAACAAGTACAACGACGGAAAACGTTTTGTCTAACCTTTATGAGAAAAGGAATTCTGTTACTATAACACAAGAGACACAAGATGATTCTGCCTCGAACAGTTCGTTCTGTGTTAACGAAAATGGTCTTGacattcaaaaattgaattcattgGATGATGTTCAAGCAGCACTTCTTCTTAACAAGCATTTGATTACCTGTTTGCAAACTGCAAAAATGAAGTTTACGACTTTACTTGAGGAATGTCGAAAAAGGAAACAATATGTTGAGCAGAAAATTTTGCAGACTGGAAAGTCCACTTCCGCTTCAAAAATCACATTCTGTAATGCTGGCATGCCATACTTCAAAGACAAGGCTCGTTTCATTGCACCGATGAATGAAGatgccaagaaaaagaaagtgtcTGGTGAGTTACAGATTGTTCATCTTCCTATTGTTTGTCGATGGACTCCTAAAGATAGGCATATTCTTATCAATGCAATCAAACAAGAGGCCATAACAGATGTTTTAAGTAACAAAAAGCTACCAGGCAAAAGAAAAGTTTCTCATCTTAAGATGACCAGTGCACAAAGAATAGCAGAAGAAAGGGCAAATTTGTTGCCTAAATGTTTTCAGGACACTGTTGGACCTTTGGGTGCTAGAGAATTTGACTGGTTGAAAATTGCTGCTACTGATTTTGAAGGTAGGCACTCAGCTGAAGAGTGTCGTGTAATGTGGAATATATTCTTACATCCTGATATCAATAAGACAAAATGGTCTAAGGCGGAAGATGCGCAGTTGAAGCAACTTGCTGAGcagtataattatgaaaactgGGATGAGATTGccttgaaattaaaaactcGGAGATCAGGCTACCAATGTTTCATTAGGTTTAACACTACCAACCGTCAATTTGGATTTAAGGGATGTCAGTGGAAAACGGAAGAGGATCAAAGACTTGTGGATGCTGTAAATAAGTTAAGGCATGGAGACTATATTCCTTGGGGTGAAGTTGCTAGTTGCATGCATAATAGAACAAAGCAACAGGTGTACTTTCGTTGGACCTACAGTTTGGCACCACATTTAAAAAAGGGTCGATTCACAGCAACGGAAGACAAAATCTTGATGAATGCTGTAGCAAAGTATGGAAAGAACTTTGGAAAAATAGTAGCTCTTTGCATGCCTAACAGAAGTACAGTTCAGCTTAGTGACCATTACCAAACTCTAGTCGTGAGAGAAAGTGGGAACCAAAATACTTGGAATCTTGAGGAGGATGTACAACTTATTAAACTTCACGTACAATATGGTTCAGATTGGGCAAAAATTGCTAAGCACTTCCCCACAAAGACCAGGATTCATGTTAGACATAGATTTTCTGCTCTTCTTCGATATCAGAGGAAGAATGTTTCCTTGAAAGATATTCCACGGACGTACCGAGGAAATTTATCTGCAACGGAAATATTTCCTCTAGAGGAGAAGAAAACTGATGAAGAGAATGTTGAAATAGCTGAAGATGAAACAGATATTGACTCGCAGCTTCTACtctattttaaagaaatagcATCTCCATCGAAATCTGAAggaacgaaaaattcatatagcTCAGATGAAATTAtgttgaaaattccaaaattgtaTAACATCCTACAGACTTTAAATGCTAATCTCGTTATTCCTGAAACTCTCCACACGCAGTctttatctttgaaaaataaacaattgttgCTTGCCTTAAGGGTATATGGCGAatcgaaagcaaaaaaagttGCAGAACGTTCTGAAAGCATAAAAGCTATACAGCAAAGGATGTTTGGCAGTGAACACAACTCAGACACCTACAACCATTTTGTACCACCATTACCGTTCAATATGATATCCAAAACCAAAAATGCAATTCACCAGAAAACTTTAGAATATGAATTAAACACTGATCAACAATTTTCTGCAGAAGTGAACATGCAGCTAGAAACTcctgaaaatgtaatttctatGATAGGCATTAATTCGCATCTGGAGTTTGAAAAAGTTACTCGGATCTTAATTGGATTAAGTAGAAAGATAGAGAAGCACGCTGTcatccaaaaaatttacattctaCCTCCACAGAAAAAGGTTAATAATTCGCATGATACAAAAagacatataaaaaattgcagtaAAGATGGTGGGAAGAAGCTCCAAATAATGTCATTTCCTCCCAAGAATCCTAGCACTTCTGGTATTGCAGTTGAATCAAGTACAAAAGATGTAAGTCAATCAGATGAAGCACCATGGCCACGAATGTTTCAGGAAACATTGCCATCATCAGGTTACTCAACATTGGAACCAAATTATTCAACAATATTTGGATTTCGCAATATTCTTTCGTCAAAACAAATGTCAAACATAAACGACGAAGCTGTAGAAGAACTAAGAAACAGGCTCAAATATCAACCGGATGGTCATAAAGCTTTCGAGCTGCTGAGGCAACGGCTGTTAAAGTTGTTCAAAATTCCAGTAGGCATGTCGCAAATTCTGCCACCAGAAATACACggtggagaaaaaatatttttgtcttacGCAGAAAATGTGTTGAAAAGAAAGTTAGaaagtaaaagtgaaaaagtcgTTCCTAAAAAACCAGGTACAACCGAAAAGGAATCACGtgttaaaaaggaaagaattgATAATCCGAGTGAAACTGTACACAGCTAA
Protein Sequence
MSDSEDYTLLDDIKALENALAHKNQSPSTSTSTTTENVLSNLYEKRNSVTITQETQDDSASNSSFCVNENGLDIQKLNSLDDVQAALLLNKHLITCLQTAKMKFTTLLEECRKRKQYVEQKILQTGKSTSASKITFCNAGMPYFKDKARFIAPMNEDAKKKKVSGELQIVHLPIVCRWTPKDRHILINAIKQEAITDVLSNKKLPGKRKVSHLKMTSAQRIAEERANLLPKCFQDTVGPLGAREFDWLKIAATDFEGRHSAEECRVMWNIFLHPDINKTKWSKAEDAQLKQLAEQYNYENWDEIALKLKTRRSGYQCFIRFNTTNRQFGFKGCQWKTEEDQRLVDAVNKLRHGDYIPWGEVASCMHNRTKQQVYFRWTYSLAPHLKKGRFTATEDKILMNAVAKYGKNFGKIVALCMPNRSTVQLSDHYQTLVVRESGNQNTWNLEEDVQLIKLHVQYGSDWAKIAKHFPTKTRIHVRHRFSALLRYQRKNVSLKDIPRTYRGNLSATEIFPLEEKKTDEENVEIAEDETDIDSQLLLYFKEIASPSKSEGTKNSYSSDEIMLKIPKLYNILQTLNANLVIPETLHTQSLSLKNKQLLLALRVYGESKAKKVAERSESIKAIQQRMFGSEHNSDTYNHFVPPLPFNMISKTKNAIHQKTLEYELNTDQQFSAEVNMQLETPENVISMIGINSHLEFEKVTRILIGLSRKIEKHAVIQKIYILPPQKKVNNSHDTKRHIKNCSKDGGKKLQIMSFPPKNPSTSGIAVESSTKDVSQSDEAPWPRMFQETLPSSGYSTLEPNYSTIFGFRNILSSKQMSNINDEAVEELRNRLKYQPDGHKAFELLRQRLLKLFKIPVGMSQILPPEIHGGEKIFLSYAENVLKRKLESKSEKVVPKKPGTTEKESRVKKERIDNPSETVHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00293645;
90% Identity
iTF_01475375;
80% Identity
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