Tsti002718.1
Basic Information
- Insect
- Trachelus stipa
- Gene Symbol
- e2f7
- Assembly
- GCA_036026315.1
- Location
- JAYRCB010000248.1:181645-184067[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-24 8e-21 74.1 0.0 1 65 82 150 82 150 0.90 2 3 2.9e-20 1.9e-16 60.0 0.1 2 58 213 291 212 303 0.91 3 3 0.32 2.1e+03 -0.9 0.1 25 53 570 599 545 603 0.68
Sequence Information
- Coding Sequence
- atgtCGGAGTCAGGACATACGACGATACGCAGCTCTCCTGAACCTGATCGCAAAGTAATTTGTGATCTTGAGAATGCCATTCCAACACCAATTTCTCCTACTGCAAACCTACGCTTGCTGACAACGTTAGCATCCAACTTGAAGAGTGCTGCTGATTGGAATAATAGCAACAAAAGTCCACGTAGTAATTTGGAGTTATTCCATGAGATATCAGATTCCGATCCCTTGAAACTGTTGCCTAGGAAAGAAAAGTCTCTTGGACTTTTGTGTAATAAatttttaagtCTCTATCCTTTAAATAAGGCCAATGATGTTCCAGAAGAAATTTCCTTAGACTGTACTGCCAAGGCACTTGGTACTGAAAAACGTAGaatatatgatattataaatatactagAAAGTCTTGAGATGGCCTCCAAAGTTGGAAAGAATCGATACCGCTGGCATGGGCAAAATGGTTTATCTGGTACTCTTGTTAAGCTCAAAGCAACAGCCATTAGACTTGGTCTTAGAGAACAAATAcgtgaaatacaaaaaaatcatggaGCATATGATGGGCAATTCGATGAAGATTCATTGTCTTCTTTATTAGCAACACCACCGTTACAAAGTTCTTCATCTGATATTATAAAAGAAGACAAGAGCTTGGGACTGATGTGTCAGAAGTTTGTTATGCTTTTTCTTGTATCTCTAAAAAATGGTGTCATCAACCTGGATATAGCCGCTAAGGTTCTTATATCAGATTCAGATCGTACGCCGGAAGCGGGAGACATAAATTTGAGATCCcgtttcaaaacaaaagttCGTCGACTGTACGACATAGCAAACGTATTGACAGCAATTGGATTGATAGAAAAAGTTAGTACACGGGataatacaataaagaaaccggtatttatttataccgGGCCTAACGTCGATTACGTGGATTTTGATgcagAAACTCCCAGCAACGAAGGAAAGGCACTCTCCCTTTTAGGTACACTGACACCTGTAAGAAGTGTTACTAAGATGTCACTTCCACAACGCCTTTCAGAAGGTAGTAAATTACAGACGCGAAATAGATTTTCCTCAAGCAGCAAGAACAGCAGCGACAACGGTTGTACACCAGTATACGATAGAAGAGAACCTAGGAAGAGAAAGTTATTTGGACCagATGAATCTTTTATGAGAACTAAAAGTTCTCCATGTTTAGATACCAATGAACGTTCCTCAGAACGTCTCAATGATTCAATTTTAAGAGTCGCCGAAATggaactaaaaaaattgagatcATCCGAGAGGACAAAGCCAAAGGTCTGCACAAAGCTCTTTCCTAGGCACAATTCGGATTCCTGTATATCTGCCGCACAAATCATTCCCGATATACAGAACTATTCAAATGGTTCCACATCTAGTTTGAATTCTCTGCTGTATGACCAGTCAGGTTCAAAGGTTCAGTCCAATTCTACCGCTCTGGTTTTACTATCAAGCAAAGagaatttacatgaaaacaaTCAACACTATATTGTCACAacggaaaaaatgaaaagtgctGCAAATGTTGAGATGTCACCTAGACCAGACTCTTCTCAAGTGCGTACAATACGTCTGCAGAGAGAAGCTGAGGGATCGAAAACAAAACCGGCAATGCTGAAGATTCTGGATTACAATATTGTTTCACAAGTAAAAGACGCAACAAATGTATCCTGCAAGTCTCCAATGACAGACGTTTCAACGAACACGtcaaatatcaagaaaatcGTGAAAAGAAGACCCTACAGTATACGATCTAATGTAAACTCTATGAAATTAGTGAACTTGGCAAATTTTGATGCCAAGAAATTAGTGCCTATTAAACCAAGTGATTTAAGAATTTCAGTGACAACGGTGTCGACATCGACGTCGACTGTGATAACACCATCGCCGTTGCCATCGGTTATTTTTGAAAGTCCTAATATTGGCAATGCTAGTTTTTCTATTCTTACTGGAATTCCTGCACAAGTGTTATCTCCTGGTGATACTTTCAAGGCTGTTAAAGTAGGTAACACTGTACAACTAGTCCAGGTATACGATGACTCCAGTAAGGCTACTAATCATGGGAATATTACTATGGACTCCAGTTAA
- Protein Sequence
- MSESGHTTIRSSPEPDRKVICDLENAIPTPISPTANLRLLTTLASNLKSAADWNNSNKSPRSNLELFHEISDSDPLKLLPRKEKSLGLLCNKFLSLYPLNKANDVPEEISLDCTAKALGTEKRRIYDIINILESLEMASKVGKNRYRWHGQNGLSGTLVKLKATAIRLGLREQIREIQKNHGAYDGQFDEDSLSSLLATPPLQSSSSDIIKEDKSLGLMCQKFVMLFLVSLKNGVINLDIAAKVLISDSDRTPEAGDINLRSRFKTKVRRLYDIANVLTAIGLIEKVSTRDNTIKKPVFIYTGPNVDYVDFDAETPSNEGKALSLLGTLTPVRSVTKMSLPQRLSEGSKLQTRNRFSSSSKNSSDNGCTPVYDRREPRKRKLFGPDESFMRTKSSPCLDTNERSSERLNDSILRVAEMELKKLRSSERTKPKVCTKLFPRHNSDSCISAAQIIPDIQNYSNGSTSSLNSLLYDQSGSKVQSNSTALVLLSSKENLHENNQHYIVTTEKMKSAANVEMSPRPDSSQVRTIRLQREAEGSKTKPAMLKILDYNIVSQVKDATNVSCKSPMTDVSTNTSNIKKIVKRRPYSIRSNVNSMKLVNLANFDAKKLVPIKPSDLRISVTTVSTSTSTVITPSPLPSVIFESPNIGNASFSILTGIPAQVLSPGDTFKAVKVGNTVQLVQVYDDSSKATNHGNITMDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01130599;
- 90% Identity
- iTF_01474471;
- 80% Identity
- -