Tman005413.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trabutina mannipara
Gene Symbol
stc
Assembly
GCA_900080175.1
Location
FKYK01016868.1:9680-13571[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.9 1.7e+04 -4.0 1.6 15 19 254 258 253 258 0.81
2 14 0.053 9.7e+02 -0.0 0.1 4 10 288 294 287 295 0.94
3 14 2.4e-07 0.0045 17.0 14.2 3 19 308 324 307 324 0.93
4 14 1.7e-09 3.1e-05 23.9 10.9 1 18 360 377 360 378 0.98
5 14 3.4e-06 0.062 13.4 12.0 1 19 416 434 416 434 0.98
6 14 0.06 1.1e+03 -0.2 0.5 5 10 464 469 464 470 0.96
7 14 3.2e-07 0.0059 16.6 9.1 4 19 482 497 475 497 0.87
8 14 0.00022 4 7.6 8.4 1 11 536 546 536 547 0.97
9 14 0.77 1.4e+04 -3.8 1.5 4 10 551 557 550 557 0.86
10 14 5.4e-08 0.00098 19.1 10.8 1 18 563 580 563 581 0.97
11 14 0.51 9.4e+03 -3.2 1.0 6 10 610 614 609 615 0.66
12 14 1 1.8e+04 -7.1 10.7 9 18 627 637 617 638 0.70
13 14 2.3e-07 0.0042 17.1 10.1 1 16 674 689 674 699 0.91
14 14 0.00056 10 6.3 15.0 1 18 706 724 706 725 0.90

Sequence Information

Coding Sequence
ATGAgccaaaatttggaagaaattttcacaagaGCAGCTAGTTCTAATTTAACGGCCACTGCTGAAGAGTTCGTACCCAGAACAgcatcgaatttttctaacagTCGTAATTCAAACTCGACAGACATGGATTATAATAGGTACGATAACAGAAATCAAAGATACGATAAAAGATATCCATACTATGAAGACAATTCCTATTACAATGGTGGCCGAAGTGGGCAATCGAGTAACACTTACGCTAGCAAATCAGCACCAAAAGGTAAAAATCGAAGGAATGAATTTGATGATGGATATGCAAAGTCCTCCAGTTACTACGGTGGTGCTTCTAATTCTCGGTTTGACAATTCCCAGCGATACTCTTCGGAGCCTAAGAACAATTACAAGAATAATCAAATGAAGAAGAAAGACTACAATGAAGAAGATGATGAAGAGTATGATGACAAATATCAGCAGAGTTCCCGTTTCAGTGTTTATGAAAACCGAAACTATACGTCGAATTCTTCCACTAATTGTATAAATAAATCTCACAACGCGAATGGATTCGTTAACAACATCAATAAAAaaaaagctACAATATGTCAAAGAGAAAGATTGACAGAACTGTTAAACGATGGTATTTTAGAGTGCTTAGTTTGCTGCGAACGGATCAAACAACGTGAAGCTGTTTGGAGCTGTTCAAATTGTTATCATGTTCTACATCTGTGGTGTATCACTAAATGGGCCAAGTCTTCCAAAAACGATAATAATAACTGGAGATGTCCAGCTTGTCAGAATGAAAGTGTCCAGATACCTGAAAAATACATGTGTTTCTGTGGTAAATCTAGACTGCAAATGGAATGGAATCGTAACGATACGGCTCATTCTTGCGGTGAAATATGCGGTAAAAGCAAAGAGAATCCGACAACATGGTTCATATGCGAacataaatgtaatttattgtGTCACCCTGGACCTTGCCCTTCATGTACCATTCAAGTGACTCGcgaatgTGGGTGTGGTCGCAGTACTAGAACCGTACAATGTAGTTTTAAAACTCCAATTCTTTGTGGAGCAGTTTGCGATCGGTTATTGAACTGCGGTATTCACCGGTGTTTGAAAACATGTCATTTAGGAGAATGTGAGCCTTGTGATGTGAAAACAgaaatcgCTTGCTATTGTAATAAGCTGAAGAAAGAGTTGACCTGTGGATCAcaagaggagaaaaatttcagttgcgGGGAAAAATGCGATAAAACTTTAACCTGTGGCAATCATAAATGTAATCTTATTTGCCACCAAGAAGAATGTGGCCTCTGTCCGAGATCATCAGTCGTAGTGAACACGTGCTGTTGTGGCAAAACTCCTGTAACGGAAAATACTCGTCAGTCATGTTTGGATCCGATGCCAACGTGTGAACAGATTTGTGGAAAACGTTTACCTTGTGGGTCGTTGAATAAACCTCATTTTTGCGAATCCATCTGCCATGACGGCGAGTGTGCTCCTTGTAAGAAAAATACCTTCATGAGGTGTCGATGTGGAGCGAAAGAAATGTCGATACCTTGCTCCGAACTGAATAAGAATGCCGAATTCGTGTGCccaaaaaagtgtaataagAAACGATCGTGTGGAAAGCATAAATGCAATCAACTTTGTTGTATCGACGCAGAGCATATTTGCCCTCAACGCTGCAGCGGTACTTTGAGTTGTGGTAAACATCGATGCGATATTTTGTGTCATCGGGGCAAATGCGGACGTTGCTTGCAAAGCAGTTTTGAAGAACTGTATTGTCATTGCGGCCATTCTGTAATTTACCCGCCGGTACCGTGCGGAACAAAACCGCCCGCATGTGATCAGCCATGTCAACGTCAACACGACTGTGAGCATCCACCGTTACACGTTTGTCATTCCGATCGTACTTGTCCGCCCTGCATAGTATTTACCGATAAGCTTTGCTACGGTGGCCATGAGttgCGCAAAACCATTCCTTGTTATCAAAAAGAGTTTTCTTGTGGGCTACCGTGTGGTCGACCATTACCGTGCGGATTTCATAAATGTCAAGTACCGTGTCACGCCGGCAACTGCTTGTCcgcttcgaaaaaatgtacccAGCCTTGTATGAAGCCGCGCGATTTATGCGGACACCCTTGTAACGCGCCCTGCCACATTGGACATTGTCCCGATACAGCTTGCCGCGAAATGGTCAAAGTGACTTGCGCTTGCGGTAATTTAGTCGCTGATCATCATTGTTACGAGCATATCGATGACTACAGACGTATCGTATCTGCAACTTTGGCAGCCAAGATGAATGAACTGCAGTTGGAAAATTCAGTCAATTTACAAGACATAtcggaaaaaatcaacgcagaaaaaatcaacttgaggACcCTGGAATGCTCTGATGAGTGCAAGTTGATCATGCGAAATCGACGACTAGCTTTGGCTTTGCAAATACAGAATCCAGACTTGAGCGCCAAATTAACTCCGCGGTATTCTGATTTCATGAAAAGTTGGGCTAAAAAAGATGCCAATTTTTGTCGCCACATTCACGATAAACTTACAGCTTTAGTGAAATTAGCTAAAGACTCGAAACAGAAGAGTAGAAGTTTCTCGTTTGAAGTTATGAATAAAGAGAAACGTCAATTCGTACACGAATATTGCGCTCATTTCGGGTGTGAATCGGAAGCATACGACGCCGAGCCGAAAAGAAACGTGGTCGCTATTGCTGTCAAAGGAAGGTGCTGGTTACCTGCTTACTCAGTGCTGGAAGTTTTGCAACGCGAAAGTGGCCAGCGTAAGGTGCCTTTACCAGTgctcaataataaaaaatccagAAACGAGAACGATCCGTCGAGTGGATTACCACCGACTATAATCTTACCTGTGTTACCAAGTGCTAGCTCCAATTcgagatttaattatttcggagattaa
Protein Sequence
MSQNLEEIFTRAASSNLTATAEEFVPRTASNFSNSRNSNSTDMDYNRYDNRNQRYDKRYPYYEDNSYYNGGRSGQSSNTYASKSAPKGKNRRNEFDDGYAKSSSYYGGASNSRFDNSQRYSSEPKNNYKNNQMKKKDYNEEDDEEYDDKYQQSSRFSVYENRNYTSNSSTNCINKSHNANGFVNNINKKKATICQRERLTELLNDGILECLVCCERIKQREAVWSCSNCYHVLHLWCITKWAKSSKNDNNNWRCPACQNESVQIPEKYMCFCGKSRLQMEWNRNDTAHSCGEICGKSKENPTTWFICEHKCNLLCHPGPCPSCTIQVTRECGCGRSTRTVQCSFKTPILCGAVCDRLLNCGIHRCLKTCHLGECEPCDVKTEIACYCNKLKKELTCGSQEEKNFSCGEKCDKTLTCGNHKCNLICHQEECGLCPRSSVVVNTCCCGKTPVTENTRQSCLDPMPTCEQICGKRLPCGSLNKPHFCESICHDGECAPCKKNTFMRCRCGAKEMSIPCSELNKNAEFVCPKKCNKKRSCGKHKCNQLCCIDAEHICPQRCSGTLSCGKHRCDILCHRGKCGRCLQSSFEELYCHCGHSVIYPPVPCGTKPPACDQPCQRQHDCEHPPLHVCHSDRTCPPCIVFTDKLCYGGHELRKTIPCYQKEFSCGLPCGRPLPCGFHKCQVPCHAGNCLSASKKCTQPCMKPRDLCGHPCNAPCHIGHCPDTACREMVKVTCACGNLVADHHCYEHIDDYRRIVSATLAAKMNELQLENSVNLQDISEKINAEKINLRTLECSDECKLIMRNRRLALALQIQNPDLSAKLTPRYSDFMKSWAKKDANFCRHIHDKLTALVKLAKDSKQKSRSFSFEVMNKEKRQFVHEYCAHFGCESEAYDAEPKRNVVAIAVKGRCWLPAYSVLEVLQRESGQRKVPLPVLNNKKSRNENDPSSGLPPTIILPVLPSASSNSRFNYFGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01264087;
90% Identity
iTF_01150911;
80% Identity
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