Trut019050.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- -
- Assembly
- GCA_029784135.1
- Location
- CM056648.1:118658930-118659373[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-07 6.7e-05 24.1 0.0 6 43 20 57 18 59 0.91 2 2 1.8 1.1e+03 1.0 0.0 15 25 130 139 125 139 0.85
Sequence Information
- Coding Sequence
- ATGGCTTGGACATACGTGAAGAAAAGGTCGGCACCGGCATATTCTAAAGCTTCTACAGATGCGGCCATTGACGCTGTAGAAGGTAAAAGAATGACAGTGTCCCAAACTGCACGATGCTATGTAATCCCCAGATTTACTCTACGAAAAAGATTTAACGGACAGAGAAGCGTTAAAAGTACTACAGGAGGAAGACCCACTGCGATTTCGCTGAATGTCGAAGCTAAAATTGCCTCATGCATTAAAACGATAGATAAATGGGGTTTTGGCTTATCCAAGACCGAGGTTCTACAGGCTATCGCACGGTATCTGACTGAAAACCATATTCCCAATCCTGTCAAACATTATTTGCCCGAAGATAAATATGTTCATCACTTCAAGAAACGTCACGGTTTATCTCAAAAGAAGGCTCAATCTATTGAGATTGCTCGAAAGAGAAATGACTAA
- Protein Sequence
- MAWTYVKKRSAPAYSKASTDAAIDAVEGKRMTVSQTARCYVIPRFTLRKRFNGQRSVKSTTGGRPTAISLNVEAKIASCIKTIDKWGFGLSKTEVLQAIARYLTENHIPNPVKHYLPEDKYVHHFKKRHGLSQKKAQSIEIARKRND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01471314; iTF_01471317; iTF_01471302;
- 90% Identity
- iTF_01471314; iTF_01471317;
- 80% Identity
- -