Trut050781.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- -
- Assembly
- GCA_029784135.1
- Location
- CM056649.1:317241460-317241975[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-08 1.1e-05 26.7 0.0 4 43 18 57 16 59 0.91 2 3 3.8 2.4e+03 -0.0 0.1 15 25 130 139 128 139 0.85 3 3 2.2 1.4e+03 0.7 0.1 26 32 164 170 162 171 0.87
Sequence Information
- Coding Sequence
- ATGGCTTCGACATACGTGAAGAAAAGGTCGGCACCGGCATATTCTAAATCTTCCTTTGATGCGGCCATTGACGCTGTAGAAGGTAAAAGAATGACAGTGTCCCAAACTGCACGATGCTATGTAATCCCCAGATTTACTCTACGAAAAAGATTTAACGGACAGAGAAGCGCTAAAAGTACTACAGGAGGAAGACCCACTGCGATTTCGTTGAATGTCGAAGCTAAAATTGCCTCATACATTAAAACGATAGATAAATGGGGTTTTGGCTTATCCAAGACCGAGGTTCTACAGGCTATCGCACGGAATCTGACTGAAAACCATATTCCCAATCCTGTCAAACATTATTTGCCCGAAGATAAATATGTTCATCACTTCAAGAAACGTCTCGGTTTATCTCAAAAGAAGGCTCAATCTATTGAGATTGCTCGAAAGAGAAATGTCGATCCATCTATAATGGCTAATTATTTTCAACTCCTAGAAGACGTGACTTATGGAGTTCCTCCATCTACAATGTAG
- Protein Sequence
- MASTYVKKRSAPAYSKSSFDAAIDAVEGKRMTVSQTARCYVIPRFTLRKRFNGQRSAKSTTGGRPTAISLNVEAKIASYIKTIDKWGFGLSKTEVLQAIARNLTENHIPNPVKHYLPEDKYVHHFKKRLGLSQKKAQSIEIARKRNVDPSIMANYFQLLEDVTYGVPPSTM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01471327;
- 90% Identity
- iTF_01471327;
- 80% Identity
- -