Trut031785.1
Basic Information
- Insect
- Toxorhynchites rutilus
- Gene Symbol
- -
- Assembly
- GCA_029784135.1
- Location
- CM056648.1:335702378-335702821[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-08 1e-05 26.8 0.0 4 43 18 57 15 59 0.90 2 2 1.8 1.1e+03 1.0 0.0 15 25 130 139 125 139 0.85
Sequence Information
- Coding Sequence
- ATGGCTTGGACATACGTGAAGAAAAGGTCGGCACCGGCATATTCTAAAGCTTCTATAGATGCGGCCATTGACGCTGTAGAAGGTAAAAGAATGACAGTGTCCCAAACTGCACGATGCTATGTAATCCCCAGATTTACTCTACGAAAAAGATTTAACGGACAGAGAAGCGTTAAAAGTACTACAGGAGGAAGACCCACTGCGATTTCGTTGAATGTCGAAGCTAAAATTGCCTCATGCATTAAAACGATAGATAAATGGGGTTTTGGCTTATCAAAGACCGAGGTTCTACAGGCTATCGCACGGTATCTGACTGAAAACCATATTCCCAATCCTGTCAAACATTATTTGCCCGAAGATAAATATGTTCATCACTTCAAGAAACGTCACGGTTTATCTCAAAAGAAGGCTCAATCTATTGAGATTGCTCGAAAGAGAAATGGCTAA
- Protein Sequence
- MAWTYVKKRSAPAYSKASIDAAIDAVEGKRMTVSQTARCYVIPRFTLRKRFNGQRSVKSTTGGRPTAISLNVEAKIASCIKTIDKWGFGLSKTEVLQAIARYLTENHIPNPVKHYLPEDKYVHHFKKRHGLSQKKAQSIEIARKRNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01471327;
- 90% Identity
- iTF_01471327;
- 80% Identity
- -