Tmul008363.2
Basic Information
- Insect
- Toxonevra muliebris
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963691655.1
- Location
- OY829326.1:164369471-164378172[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.15 2.1e+03 -1.7 3.8 26 71 40 82 35 110 0.51 2 4 0.26 3.7e+03 -2.5 1.3 37 77 258 302 248 317 0.39 3 4 5.5e-117 7.8e-113 377.4 29.1 1 299 335 631 335 632 0.93 4 4 0.15 2.2e+03 -1.7 3.5 213 245 654 685 635 705 0.53
Sequence Information
- Coding Sequence
- atgtcagaaaCTCACGTCCGGAATGCTAAAAAGcggagcaataaaaaaaataaaaaagttgccgATCTTGTTAGTTTAACAAATTCTTCTTCAAACAGCAAAATCGCTCAGGAGCCTCAGCAGGAAATCATGAATGAGAAGGGGGAGGAGGTggcgaagaaaaaagaagaggagAATAACAACGTAAACAAAACGACGGCAACAACGACAGAACCCACATTAAATAAgaatagtaataataatcataatgaCGATGATGAAATCTTCGAAGAGTTTGACTTTAGTGATACTGATTTAAATGCGCTCAACGAGAACGAAAAcaagagcagcaacaacaacaacaataacgacaatGTAATTGTTGATGAAGTTAACGCTACAAAAGCCGGCAGTGCTGCTATTGCTACTACTGACAATGTTGCTATTGTTGATAATAAAGATTCGCATTCACACGTTAATGAGACAACAAAAGATTTATTCAGGACACAAAAGAGTATAATCAATTTGTCGCAAGAAGCAGACAGTACAGTGCACGACAACCACAGTGCCACAACtgatagcagcagcagcaacaccgaTAACAAGTCAACAAATTTTGCTATTGCAGTTGAGACTACTGATAAACGCATAAAAAACATACCATCAAATTTGGATTTGAAGCAAAATGAAAACGTAGaaattacaacagcaacaacaaccacagatTCATTTTGTCCCATAACACCAAGATGTATAGTTGATGTcgctgatgatgacgatgaagatGCATCCGATTTCAAAATGCCGCAACGTTCCAATTTGTCAAAGACTCAAAGTAGCAGTAAAATTGTAGATAAAGCACAGAGTGCAATGACTGCAGGCAAAGCAAAGGCTTCCGCCAAAGATTCTGCGACTAACACCTCTGCCACTACacacgatgacgatgacgattattatgatgatgaggatgatgaGCCTGATGATGAACTAATTGTTCACTTCTTGGGAGAAGCAAATCGTATTgCTGAGGCAAGATTGGCCGCAAGAAGACAGGCACGTGCCGAAGCGCGTGAAATTCGCATGCGCGAATTGGAACGTCAACAAAAGGAACAAGAACAAAATGCAGATCGCGTATTTGATATGCACACCGCATCTGGTATCGATCCTTTATCACGGTCTCGACTCACTGCAGGTATTGGTGTTAGTTCACCGGTTAGTGGAGTATTACTGAATTCTGTACGCGGTAGTTCAATGTCATCACGGCGCAGCAGCGAAGACTCACTTGAAGAGGAGGGACGCAGTTTAAGAGATATACGTCATGAGCTTAAAgATGTTGAGGAAAGGTTTCGCAAAGCAATGATTGCTAATGCACAGCTGGATAACGAACGTGCCTCGCAAACGTATCAAATACAGCTGCTCAAAGATAAGCTTGAGGAGATGGAAGAATCCTATGCGCAATTACAGCGTGAATGCAAGGAGAAATCACGTGATTGCAATGCACTGAAACGTAATCTCGACAAGCTAAGCGAGGAACTGAAACTTGTGCAAGGCCAATTAAGTGAACGGGATGCACTAATAGCTGAACAGGGTCTAGTAATTGTCGCGGTTGAGAATGAAGATGGCACCGATGCAAAACGTGCTCTAGTCAGTGTAGAGAATGCTCAACTATTAGGTTCTGTGCAAGGCTCGTTAGatGTTCGACTTAAAAAATTCAGCGAAGAGAAGCAACAGCTAATGGCTGAAGTTCAAAAACTGCAAGACCAATTAGAAAATCATAAGAGTCAAGGCAAAGGTCGCGGCAATTCAATGAATGGTCCTTCAGGGTCTGATGAGGACTACGAAGCTCAGCGTGAGgcaaacaaaattatatcaGATTATAAGTATAAACTGCAAAAGGCTGAACAGGAAATTGCTAGTCTACAGGCCAGCTTAGCACGTTCAGAAACGCAAGTAATACGCTACAAGAGCACAGCGGAAGCAGCTGAAAAAGCGGAATCTGAATTAAAAATCGAACGAAGAAAACTGCAAAGAGagAATCGTGAAGCCATGGAACGCTTAGAAGAGCTGGAAACATCAAACAATCACCTGCTTAAGAGATTAGATAAACTAAAGAATGCAAAAAGTGCGTTGCTAAAGGATCTTtga
- Protein Sequence
- MSETHVRNAKKRSNKKNKKVADLVSLTNSSSNSKIAQEPQQEIMNEKGEEVAKKKEEENNNVNKTTATTTEPTLNKNSNNNHNDDDEIFEEFDFSDTDLNALNENENKSSNNNNNNDNVIVDEVNATKAGSAAIATTDNVAIVDNKDSHSHVNETTKDLFRTQKSIINLSQEADSTVHDNHSATTDSSSSNTDNKSTNFAIAVETTDKRIKNIPSNLDLKQNENVEITTATTTTDSFCPITPRCIVDVADDDDEDASDFKMPQRSNLSKTQSSSKIVDKAQSAMTAGKAKASAKDSATNTSATTHDDDDDYYDDEDDEPDDELIVHFLGEANRIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMHTASGIDPLSRSRLTAGIGVSSPVSGVLLNSVRGSSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQTYQIQLLKDKLEEMEESYAQLQRECKEKSRDCNALKRNLDKLSEELKLVQGQLSERDALIAEQGLVIVAVENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFSEEKQQLMAEVQKLQDQLENHKSQGKGRGNSMNGPSGSDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAESELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01132917;
- 90% Identity
- -
- 80% Identity
- -