Ttub005171.1
Basic Information
- Insect
- Torymus tubicola
- Gene Symbol
- ZFX
- Assembly
- GCA_035583055.1
- Location
- JAWWEQ010000027.1:12869198-12874861[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2.1 4.3e+02 3.2 0.1 3 23 32 52 31 52 0.94 2 15 1.3 2.7e+02 3.8 2.6 1 20 1052 1071 1052 1075 0.76 3 15 0.00036 0.076 15.0 2.5 2 23 1160 1182 1159 1182 0.96 4 15 0.0017 0.35 12.9 0.4 2 23 1195 1216 1195 1216 0.98 5 15 1.9e-05 0.004 19.0 3.0 2 23 1219 1240 1218 1240 0.97 6 15 0.0022 0.45 12.5 0.3 1 23 1246 1268 1246 1268 0.97 7 15 3.1e-05 0.0065 18.4 4.5 2 23 1275 1296 1274 1297 0.95 8 15 0.14 29 6.9 3.7 5 23 1310 1328 1309 1328 0.97 9 15 2.8e-05 0.0058 18.5 1.5 3 23 1335 1356 1334 1356 0.97 10 15 0.013 2.6 10.1 0.3 2 23 1372 1392 1371 1392 0.97 11 15 8.4e-05 0.018 17.0 0.7 1 20 1398 1417 1398 1420 0.92 12 15 0.0001 0.022 16.7 2.7 1 23 1428 1450 1428 1450 0.99 13 15 0.0029 0.61 12.1 3.2 1 23 1456 1478 1456 1478 0.97 14 15 2e-06 0.00043 22.1 3.3 1 23 1484 1506 1484 1506 0.99 15 15 0.00038 0.079 14.9 7.2 1 23 1512 1534 1512 1535 0.96
Sequence Information
- Coding Sequence
- ATGGATCTCAGCACAGCTGTAAGCACGATGTCGTCCGGAGCAGCGGCCAACGGCGCCGGTGGTAGCAGCGGTGGCAACGGCGGAGCTGTGGCCTGTCCAGTCTGCACGCTGTACCTCCGCGAGGGCATCAGCTTGCAAAAGCACTTGGACACGCATCCCAAGGAACAGGTTATCGAAGCTCTCATAAGAGCCAGCAGTGCTGGCGGGGCCTCGGCGCTCCTCAGTCAAGCATGCGCTCAGCAGCCACAGACTCCGGTAGTGACACCGGTTCCGACGCCTACGCCTACGCCTACGCCGACGTCGACGCCGATGATGCAGCCGCTGCCAACGGTGAGTCCGAGCGCGGCtctgccgccaccaccgccacagcagcagcaacagcagcagccgcctgCGACTTCGCCAAGTCCACATGTTCCTCACGCCCAGTCACCGTACCCAATTGGACCTATATTCGAATGTCCACCTATTAACGCCATGATACCGCCGCCGCAGTTTGCTTCATTCAGTTACCAGCAATTCGTTAACAATGgTACGATGATGATTCCTGCACAATATGCAATGGCACAGGCACAGCCTCCCCAAACAAGTCAGATGATGCAAATGTTGTATAATCCATATGGAATGTATCATCAACAACAAATACCGACAGTTCAAATGATCTCAGCACCGCCAATGATGCCCACTTCGACGACGACGCTGCCTACGACAGTACCGGCTGTGACAACACGCATGAGGCCAGTCACGACTACAAGTAATGTATCTCTCAGTGCTGTCAACGAAACCACGACAACGTCGCCGCCGAGATCTACGAATTGTACTtcgcaacaacaacagcaacttCAGACACAGTTGCAATCACAGGCACAATCACAATCACAATCACAGTCACAACAAGAAGAGCAGACATGTCAGGAACAAGTTATTATTGAAAGAAATAAGCATCTCGTGCAGAGAATGATACCTGGACCTGATCGTATTCTGCCAGATTTAGAAATGCCTGCAACTCCTGAAGCAACTTCTCTAAAAGTTGTGGAAGAAAATATTACCTCCAACATGGAAGTAGAGCACACATCAGAACACACTGATGGTAATTGTGTTCAAGAGGAAGAGCATCAAGTTAATGAACAATATCAAAGAGAGGATCCACCAACTTTACTCAGTAATCGTGGTCAAGATAATACTGATGATTACAAGACTGAAAGGATTCTACCAGATATTGAAGATAATGACGAAATTGAATCCTTAATAGTTCgaactacaaataaaataaatagtgacAAAAATAGTGAAACTGAAATAGAAAAAACTGAACATATGGAAACTTCAACCCCTGTGGAAACAACAGAAGAGGAAGTTGCAGTAATTTCTCAATGCAATAATGAAAGTCACAGAGAATCTGAAAATAAATCAGTTGATGAGGCTCGAATTGTTGAAAACGTTGAAATTCGTGATTTGCCTACTGAAGAATCTCAAATTCCTGCTGCAAACAAATCTGACATTGAACACTTAAATCAACTTATTGTAAATATGGAATCGGAATTCAGTAACGTCGAATTATCCAACAAAAATACCCACGACAAAGTCCAAAATGAGCGTCAGGACGCGTTGTCAGTGGAACCAGATGAAAAACAAAGTGAAGAAGATGAAACTACTAGCGCGTCATATCATAAAATTAGTCCAGAACCAATTGAATGTAAAATCATTGTAGCTCATGAAGATACTGATGTTTCATCAGTCACTTCTACAGATTCAATGCAATGTgatttagaaattcaaaaaataacttCCACGTACCAGtataaatattcacaatctCTACCTTGTACCCCAGttaacaagaaaaagttttatcggTCTCTATCTCGTGCCTCTTTACGTTCCAATTTTGATCCTTCCAACGAAAATGTGTCTTCTTATCCGATAGGTTTTGAGGCTACCACCTTGCAAGAGTACCTCAAAGATAACTATAATGATGAAGATATGGAATTGGAAGAACCTGATTATCATTCTTACATGAAACAGAACGATGCACTTGCAATTGAACGAGCTAGATCACATACTCCTTTGTCTACAAGCCCAAGTAAGGTTTCCGTTTTGAAAGCACGTCGTAGTAAAATTCCCAGCTCACCTATATCTGCACGGTCTTCGTCTTCATACTATCAGATGGAAGAAGAAGATGAGGATGAAGATGATTCAGATAGTGAAAGTTACAGTAGTCGTTTAAACGAAAAAGACGATGATGAAGAGGATGAAGAAGATCAGTTAGATGATGATAAGAATGAGACCaatgatgaaaatgaagaaaagaaaaatataattttctttgaatcTACTGCTGATATCGATTCACAAATTAttcaacaacgacaacaacatcagcagcaacatcagcaacaacaacagatAGAACAACAAGAGCAAGAACAACCTACTAGCTTTAGGTCTCAAAATTCGGCGACGGATGTATACTCAGGTAGTCAGTTTCCTCTCGATCATCATTCGACAAATCAGCAAGAAACACAGAATCCCGTTGTATCAATACATCATGAAACGTATCCATTGTCTAATAGCGAGATCTCGCAAAACCTCCTTAACATATCTGAGTGTGTTGATCCAACAACTAGTACAGACTCAAAGACCTACTCTAGTTCAAAGTCGATAGTGCAGAAACCAACCACAGAGCTACTTAACATTAGTGAAGATGCTCATGCAGGGCCTATGAACGTTTTTGAATTCGACGGACTCCAGATACTTGTACCTAGCACATTTATTAGCGAATCATCGCAAAAAGCTGTGAGCGGAACAAGTCAACAATCTATGTCTAGCAGTGAAAATGGAGCCGGTAATGATGAAGAAGTGAAAAGTGTGAACATGAGGGCCGACGAAACCATGCCCGCTAGAGGAGAATTGTCAGAACAAGAAAGTAATGGTTGTACCGAACAATCAGCATGGCAGttatatatGGGACATGAATCTTCGCGTATGTCAACGTCGTATGATTTGATGGCGCGCGAAAGTTGGGAAGAATCTGAAGGTTCAGATCATGATGACAATAATGGCGGCCCACTTTTGGATAGTCGCTCGCTTGCTACTCATTTTACCTCTAGCCTCTTCCTTGATCGCGATCGAAAAACGCCAACTCGTCGCATTTTTAAATGCTCTCATTGTCCTGAAGTTTTCGAATGCCCTAAGGAACGACGCGTACACAGCACTATGGTACATAAAGAAGCAGGTCCTTCTAGCTGTAGTAATGATAATATGGACCCCtcagaaataaaagaaatcaaattacTGGATGGACGAGCGAATGCCTTTGATGATGTATTTGTTCCTGGTGGCTTGCATGCTCAGCAGGCGTACCACGTCCAACAACCGTTACTTCATCAACTTCAACCTCCTCAACACTCCAGTTCTACTAAAGCTGAGGGTGACACTAAGATCGACCCCTTACACATGATAGCTGCAAATGAAGTTAGTTGTAATATATGCAATCAACGTTTCAACAGTGAGAAATCATTACAAATGCACCACAGACGTGTACACATTGCTGAACCAGTTAAACGAGTTCGCGAGAATGCAAAATGTCAAATCTGCAATGAAGAGTTTACCTCTGTAGCAACTTTTAATCTTCATCTGAAGATACATCCTCTGGAGTGCAGCCAATGTGGCAAGTATTTCtatcgaaaacaaaattttaaactccACATGAAAAGACATTTGGGAATAAAACCATTCCCTTGTACCGTTTGTGACAAGGCTTTTCTTACAAAACAAAAGCTTGACGAGCATATGAACGGCCACACTGGAAATGCTCCCGTCAAATGCAATCTTTGCAACGAAACATTTCGCCGGTATTCAAATCTCACACAACATAAAAATCGTCACCACTTAAACATCAAAAAGAAACTGAAGGACTACATATGCCACTGCGGCGAAGTCTTTCACACAAAGAAAAAGCTCGCTTGGCACAAAGAAACGCATGATGAAAAACCAAAAGCTTGCACTTACTGCAATGAACGTTTCATACACATGGCAAGTTTGACACGACATATGAGACGAGCTCATAATCGAAGATTTGTACCCGATGCTCaacgagaaaatgaaaatgttgaatgcccaatttgtaaatgtatttaCCTGCGGTCATCGCTTGCTGTACACATGCGCGTACATAATGGGGAACGGCCGTACGAATGTCAGGTTTGTTCTAAGGCGTTTAGTACCAAATGGAACCTGCAGCTCCATAAATGGACCCACGCCGCTCGTAGCACAAAACCATTCAAGTGTAACCAATGCAGCGCTGCATTTTATAGACACAGTGACTATACAGCCCACATGAATTCTCACAGAAACGTCAGGCCTTATACTTGTAATTACTGCGGAGCGCAGtttatcagaaaatataattgctTGCGACATGTAAAAGAACACGAAGAAAATAAGGCGTACACATGTGACCTTTGTGGTAAGACTTTCCACAggtcatattatttaaaagaacacTTAAGAGTGCACTCAGGTGCGAGACCTTACACTTGTCATATCTGTGGTAAATCCAGTAGCACAAAGTCGAATCATAACAAACATGTGCGAATTCATCATGCACGTGAGCCTGTAAATACTGAGAATTAA
- Protein Sequence
- MDLSTAVSTMSSGAAANGAGGSSGGNGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSAGGASALLSQACAQQPQTPVVTPVPTPTPTPTPTSTPMMQPLPTVSPSAALPPPPPQQQQQQQPPATSPSPHVPHAQSPYPIGPIFECPPINAMIPPPQFASFSYQQFVNNGTMMIPAQYAMAQAQPPQTSQMMQMLYNPYGMYHQQQIPTVQMISAPPMMPTSTTTLPTTVPAVTTRMRPVTTTSNVSLSAVNETTTTSPPRSTNCTSQQQQQLQTQLQSQAQSQSQSQSQQEEQTCQEQVIIERNKHLVQRMIPGPDRILPDLEMPATPEATSLKVVEENITSNMEVEHTSEHTDGNCVQEEEHQVNEQYQREDPPTLLSNRGQDNTDDYKTERILPDIEDNDEIESLIVRTTNKINSDKNSETEIEKTEHMETSTPVETTEEEVAVISQCNNESHRESENKSVDEARIVENVEIRDLPTEESQIPAANKSDIEHLNQLIVNMESEFSNVELSNKNTHDKVQNERQDALSVEPDEKQSEEDETTSASYHKISPEPIECKIIVAHEDTDVSSVTSTDSMQCDLEIQKITSTYQYKYSQSLPCTPVNKKKFYRSLSRASLRSNFDPSNENVSSYPIGFEATTLQEYLKDNYNDEDMELEEPDYHSYMKQNDALAIERARSHTPLSTSPSKVSVLKARRSKIPSSPISARSSSSYYQMEEEDEDEDDSDSESYSSRLNEKDDDEEDEEDQLDDDKNETNDENEEKKNIIFFESTADIDSQIIQQRQQHQQQHQQQQQIEQQEQEQPTSFRSQNSATDVYSGSQFPLDHHSTNQQETQNPVVSIHHETYPLSNSEISQNLLNISECVDPTTSTDSKTYSSSKSIVQKPTTELLNISEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSGTSQQSMSSSENGAGNDEEVKSVNMRADETMPARGELSEQESNGCTEQSAWQLYMGHESSRMSTSYDLMARESWEESEGSDHDDNNGGPLLDSRSLATHFTSSLFLDRDRKTPTRRIFKCSHCPEVFECPKERRVHSTMVHKEAGPSSCSNDNMDPSEIKEIKLLDGRANAFDDVFVPGGLHAQQAYHVQQPLLHQLQPPQHSSSTKAEGDTKIDPLHMIAANEVSCNICNQRFNSEKSLQMHHRRVHIAEPVKRVRENAKCQICNEEFTSVATFNLHLKIHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHMNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDLCGKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01465621; iTF_01466523; iTF_01468255;
- 90% Identity
- iTF_01466523; iTF_01468255;
- 80% Identity
- -