Basic Information

Gene Symbol
ZFX
Assembly
GCA_036365515.1
Location
CM070875.1:37310233-37315721[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 2.3 1.1e+03 3.1 0.1 3 23 30 50 29 50 0.94
2 15 1.4 6.9e+02 3.8 2.6 1 20 1097 1116 1097 1120 0.76
3 15 0.0012 0.56 13.5 3.0 2 23 1205 1227 1204 1227 0.97
4 15 0.0018 0.87 12.9 0.2 2 23 1240 1261 1240 1261 0.98
5 15 2.1e-05 0.01 19.0 3.0 2 23 1264 1285 1263 1285 0.97
6 15 0.0013 0.64 13.3 0.3 1 23 1291 1313 1291 1313 0.97
7 15 3.4e-05 0.016 18.3 4.5 2 23 1320 1341 1319 1342 0.95
8 15 0.15 73 6.8 3.7 5 23 1355 1373 1354 1373 0.97
9 15 3.1e-05 0.015 18.5 1.5 3 23 1380 1401 1379 1401 0.97
10 15 0.014 6.7 10.1 0.3 2 23 1417 1437 1416 1437 0.97
11 15 5e-05 0.024 17.8 1.2 1 20 1443 1462 1443 1465 0.92
12 15 0.00012 0.056 16.6 2.7 1 23 1473 1495 1473 1495 0.99
13 15 0.0032 1.6 12.1 3.2 1 23 1501 1523 1501 1523 0.97
14 15 2.3e-06 0.0011 22.0 3.3 1 23 1529 1551 1529 1551 0.99
15 15 0.00042 0.2 14.9 7.2 1 23 1557 1579 1557 1580 0.96

Sequence Information

Coding Sequence
ATGGATCTCAGCACAGCTGTAAGCACGATGTCGGCTGGAGCAGCGGCGAacggcggcagcggcggtgGCAACGGTGGAGCTGTGGCCTGTCCAGTCTGCACGTTGTATCTGCGCGAGGGCATTAGCCTGCAAAAGCACTTGGACACGCATCCCAAGGAGCAGGTGATCGAGGCGCTCATACGAGCCAGTAGTGCTGGTGGAGCTTCGGCACTACTCAGCCAGGCATGCGCTCAGCAGCCAACGCCTACGCCGACGCCGACGCCGATGATTCAGCCGCTGCCAACGGTGAGTCCGAACGCGGCcctgccgccgccgccacagCAGCAACATCAGCCGCCTGCGGCATCGCCCAGTCCACATGTTCCTCACGCCCAGTCGCCGTACCCCATTGGACCTATATTCGAATGTCCACCTATTAACGCCATGATACCACCACCGCAGTTTGCTTCATTCAGCTACCAACAATTCGTTAACAATGGTACCATGATGATTCCTGCGCAATATGCAATGGCTCAGGCACAACCTCCCCAAACCAGTCAGATGATGCAAATGTTGTATAATCCGTACGGAATGTATCATCAACAACAAATACCCACAGTACAAATGATCTCGGCACCGCCAATGATGCCCACTTCGACGACTACGCTGCCTACAACAGTATCCGCTGTGACAACGCGTATGAGGCCGGTCACGAGTACAAGCAACGTATCTCTCAGTGTTGTCAATGGAACAACGACAACGTCGCCACCGAGATCATCGAATTGTACTtcgcaacagcagcagcaacttcAGACACAGTTACAATCACAGGCACACTCAGAGTCACAACAAGAAGAGCCGGCATGTCAGGAACAAGTCATTATTGGAAGAAACAAGCATCTTATTGAGACAATGATACCTGGGCCTGATCGTATTCTGCCAGATTTAGAAATCCCTGGAACTCCTGAACCAACGTCTCATAAAGTTGGGGAAGAAAATACTACCTCCAATATGGAAGTAGAACACACACAAGAACACACTGAAAATAATTGTGTTCAGGAGGAAGAACATCAAGCTAATGAACAATATCAAAGAGAGGATCCACCAACTTTAATCAGTAATAGTGGTGAAGTCAATACTGATGATTACAAGACTGAAAGGATCCTACCAGATATTGAAGATAATGAGGAAATTGAATCCTTAATAGTACGAACTGCAAATACAGTAAAAAGTGGCAAAAACAGTGAAACTGAAATAGAGAAATCTGTTGAACATATGGAAACTTTAACCTCTGTGGAAATAACAGAAGAGGAAGTTGCAGTAACTTCCCAATGCAATAAAGAAAGTCGTAGAGAATTTGAAAATACATCCATTGATGAGACGCAAACGGTTGAAAACGTAGAAACGCGTGATTTGCCTATTGAAGAATCTCAAACTCCTACTGCAAACAAATCTGAAATTGAACACTTGAGTCAACTTATTGTAAATATGGAATCGGAATTCAGTAACGTAGAATTACCAAACAAAAATAACCAAAAAGACAAAGTCCAGGATGAGTGCCAGGATACGTTGTCAGTGGAACCAGACGAAAAGCAAAGTGAAGAAGATGAAGCTATCAGCGTCTCATATCATAAAATTAGTCCAGAACCAATTGAATGCAAAATTATTGTAGCTCATGAAGATACTGATGTTTCATCAATCACTTCTACAGATTCAATACAGTGTGACTTAGAAATTCAGAAGATAACTTCCACGtatcaatataaatattcacAATCTTTACCCTGTACCCCAATTAACAAGCAAAAGTTTTATCGTTCGCTATCTTGTGCCTCTTTACGTTTCAATTTTGATCATTCGCTATCTCGTGCCTCTTTACGTTCCAATTTTGATCGTCCGCTATCTCGTGCCTCTTTACGTTCCAATTTTGATCGTTCGCTATCTCGTGCCTCTTTACGTTCCAATTTTGATCGTTCGCTATCTCGTGCCTCTTTACGTTCCAATTTTGATCGTTCGCTATCTCGTGCCTCTTTACGTTCCAATTTTGATCGTTCCAACGAAAATATTGGCTCTTATCCGGTAGATTTTAAGGCTACTAAGTTGGAAGACTTCATCAAAAGTTGTACTGGTGAAGATATGGAGTTCGAGGAGCCTGAGCGTCATTCTTATATGAAACTGAACGATGAACTTGCAATTGAACGAGCTAGATCACATACTCCTATGTCCGCAAGTCCAAGCAAAACTTCTGTTTTAAAAGCACGCCGTAGTAAAATGCCCAGCTCGCCTATATCTGCACGGTCTTCGTCTTCATACTACCAGATGGAGGAAGAAGATGAGGATGAAGAAGATTCTGATAGTGAAAGCTACAATAGTGGCCGTTTAAACGAAAAAGACGACGATGAAGAAGATGAAGATCAATTAGAAGATGATAAAATTGAGGTGAATGATGAAAATGAagagaagaaaaatataattttcttccAGTCTACAACTGTTATTGATTCAGAAATTATGCAACAAcggcaacaacagcagcagcagcaacaacagcagcaacagaTAGAAGAACAACAACGGCATGAACAACCCACTAGCTTTAGGTCTCAAAGTTCGGTGACTGATATGTACTCAGGTAGTCAGTTTCCTCTCGATCATCATTCAATAAACCAACAACAAACACAGCATCCCGTTGTATCAATACATCATGAAACTTATCCACTGTCTAATAGCGAGATCTCGCAAAACCTTCTTAACATATCTGAATGTGTTGATCCGACAACTAGTACGGACTCGAAGAGCTACTCCAGTTCAAAATCAGTAGTTCAAAAACCAACCACAGAACTACTTAACATCAGTGAAGATGCTCACGCAGGGCCTATGAACGTTTTTGAATTCGATGGACTCCAGATACTTGTACCTAGCACATTTATTAGCGAATCTTCGCAAAAAGCTGTAAGTGGAACAAGTCAGCAATCTATGTCTAGCAGTGAAAATGGAACGGGTAATGATGAAGAAGTAAAAAGTGTGAACATGAGAGCTGACGAAACAATGCCGGCTAGGGGAGAATTGTCAGAACAAGAGAGTAATGGCTGTACTGAACAATCAGCATGGCAGTTATATATGGGACATGAATCTTCACGTATGTCAACATCATACGACTTGATGGCGCGCGAGAGCTGGGAAGAATCTGAAGGTTCTGATCATGATGACAATAACGGCGGACCACTTTTGGACAGTCGCTCTCTTGCCACTCATTTTACTTCCAGCCTCTTCCTTGATCGCGATCGAAAGACTCCAACACGTCGTATTTTTAAATGTTCCCATTGTCCTGAAGTTTTCGAATGTCCTAAGGAACGACGCGTACATAGCACTATGGTACATAAAGAAGCAGGTCCATCTAGTTGTAGTAATGATAATATGGACCAGTCAGGgataaaagaaatcaaattgCTTGATGGGCGAGCAAACGTCTTTGATGATGTTTTTGTTCCTGGTGGCTTGCATGCTCAACAGGCATATCACGTCCAACAACCGCTACTCCATCAACTTCAGCCTCCCCAACACTCAAGTTCTGCAAAATCTGAGGCTGACGCTAAAATCGATCCCTTAGATATAACAACTGCAAATGAAGTTACTTGCAATTTATGCAATCAACGTTTCAACAGCGAGAAATCATTGCAAATGCACCACAGGCGCGTACACATTACTGAACCAGTTAAGCGAGTTCGCGAGAATGCAAAATGTCAAATCTGCAATGAGGAGTTCACCTCTGTAGCCGCTTTTAATCTTCATCTAAAGGTACATCCTCTGGAGTGCAGCCAATGTGGCAAATACTTCTatcgaaaacaaaattttaaactccACATGAAAAGACATCTAGGAATAAAACCATTCCCTTGTACCATTTGCGACAAGGCTTTCCTCACCAAACAAAAGCTTGACGAGCATATGAACGGCCATACTGGAAATGCTCCCGTCAAATGCAATCTTTGTAACGAAACATTTCGACGGTATTCAAATCTTACACAACACAAGAATCGCCACCacttaaacataaaaaaaaaactaaaggaCTACATATGCCACTGCGGCGAAGTCTTTCACACAAAGAAAAAGCTCGCTTGGCACAAAGAAACGCACGACGAAAAACCAAAAGCTTGCACTTATTGCAACGAACGCTTCATACACATGGCAAGTTTGACACGACACATGAGACGAGCTCATAATCGAAGATTTGTACCCGATgcgcaacgagaaaatgaaaatgttgaatGCCCAATTTGTAAATGTATTTACCTACGGTCATCACTTGCTGTACACATGCGCGTACATAATGGAGAACGTCCGTACGAATGTCAAGTTTGTTCTAAATCGTTTAGTACCAAATGGAATCTGCAGCTCCATAAATGGACCCACGCTGCTCGTAGCACAAAACCATTCAAGTGTAACCAATGCAGCGCAGCATTTTATAGACACAGTGACTATACAGCCCACATGAATTCTCATAGAAACGTTAGGCCTTATACTTGTAATTACTGCGGAGCGcagtttataagaaaatataattgcTTGCGACACGTAAAAGAACACGAAGAAAATAAGGCGTATACATGTGACCTTTGTGGTAAGACTTTCCACAGgtcttattatttaaaagaacACTTAAGAGTGCACTCAGGTGCAAGACCTTACACTTGTCACATCTGTGGCAAGTCCAGCAGCACAAAGTCGAATCATAACAAACATGTGCGAATTCATCATGCACGTGAGCCTGTAAATACTGAGAATTAA
Protein Sequence
MDLSTAVSTMSAGAAANGGSGGGNGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSAGGASALLSQACAQQPTPTPTPTPMIQPLPTVSPNAALPPPPQQQHQPPAASPSPHVPHAQSPYPIGPIFECPPINAMIPPPQFASFSYQQFVNNGTMMIPAQYAMAQAQPPQTSQMMQMLYNPYGMYHQQQIPTVQMISAPPMMPTSTTTLPTTVSAVTTRMRPVTSTSNVSLSVVNGTTTTSPPRSSNCTSQQQQQLQTQLQSQAHSESQQEEPACQEQVIIGRNKHLIETMIPGPDRILPDLEIPGTPEPTSHKVGEENTTSNMEVEHTQEHTENNCVQEEEHQANEQYQREDPPTLISNSGEVNTDDYKTERILPDIEDNEEIESLIVRTANTVKSGKNSETEIEKSVEHMETLTSVEITEEEVAVTSQCNKESRREFENTSIDETQTVENVETRDLPIEESQTPTANKSEIEHLSQLIVNMESEFSNVELPNKNNQKDKVQDECQDTLSVEPDEKQSEEDEAISVSYHKISPEPIECKIIVAHEDTDVSSITSTDSIQCDLEIQKITSTYQYKYSQSLPCTPINKQKFYRSLSCASLRFNFDHSLSRASLRSNFDRPLSRASLRSNFDRSLSRASLRSNFDRSLSRASLRSNFDRSLSRASLRSNFDRSNENIGSYPVDFKATKLEDFIKSCTGEDMEFEEPERHSYMKLNDELAIERARSHTPMSASPSKTSVLKARRSKMPSSPISARSSSSYYQMEEEDEDEEDSDSESYNSGRLNEKDDDEEDEDQLEDDKIEVNDENEEKKNIIFFQSTTVIDSEIMQQRQQQQQQQQQQQQIEEQQRHEQPTSFRSQSSVTDMYSGSQFPLDHHSINQQQTQHPVVSIHHETYPLSNSEISQNLLNISECVDPTTSTDSKSYSSSKSVVQKPTTELLNISEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSGTSQQSMSSSENGTGNDEEVKSVNMRADETMPARGELSEQESNGCTEQSAWQLYMGHESSRMSTSYDLMARESWEESEGSDHDDNNGGPLLDSRSLATHFTSSLFLDRDRKTPTRRIFKCSHCPEVFECPKERRVHSTMVHKEAGPSSCSNDNMDQSGIKEIKLLDGRANVFDDVFVPGGLHAQQAYHVQQPLLHQLQPPQHSSSAKSEADAKIDPLDITTANEVTCNLCNQRFNSEKSLQMHHRRVHITEPVKRVRENAKCQICNEEFTSVAAFNLHLKVHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTICDKAFLTKQKLDEHMNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKSFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDLCGKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01469939;
90% Identity
-
80% Identity
-