Tsin001713.1
Basic Information
- Insect
- Torymus sinensis
- Gene Symbol
- ZFX
- Assembly
- GCA_030522985.1
- Location
- JAPYZP010000594.1:11563-17312[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2.5 5.7e+02 3.2 0.1 3 23 28 48 27 48 0.94 2 15 1.5 3.5e+02 3.8 2.6 1 20 1055 1074 1055 1078 0.76 3 15 0.00062 0.14 14.5 2.7 2 23 1163 1185 1162 1185 0.97 4 15 0.0019 0.45 12.9 0.2 2 23 1199 1220 1199 1220 0.98 5 15 2.3e-05 0.0052 19.0 3.0 2 23 1223 1244 1222 1244 0.97 6 15 0.0014 0.33 13.3 0.3 1 23 1250 1272 1250 1272 0.97 7 15 3.7e-05 0.0085 18.4 4.5 2 23 1279 1300 1278 1301 0.95 8 15 0.16 38 6.9 3.7 5 23 1314 1332 1313 1332 0.97 9 15 3.3e-05 0.0076 18.5 1.5 3 23 1339 1360 1338 1360 0.97 10 15 0.015 3.5 10.1 0.3 2 23 1376 1396 1375 1396 0.97 11 15 0.0001 0.023 17.0 0.7 1 20 1402 1421 1402 1424 0.92 12 15 0.00012 0.029 16.7 2.7 1 23 1432 1454 1432 1454 0.99 13 15 0.0035 0.8 12.1 3.2 1 23 1460 1482 1460 1482 0.97 14 15 2.4e-06 0.00056 22.1 3.3 1 23 1488 1510 1488 1510 0.99 15 15 0.00045 0.1 14.9 7.2 1 23 1516 1538 1516 1539 0.96
Sequence Information
- Coding Sequence
- ATGGATCTCAGCACAGCTGTAAGCACGATGACGGCCGGAGCAGCGGGgaacggcggcggtggcaacgGCGGAGCTGTGGCCTGTCCGGTCTGCACGCTGTACCTGCGCGAGGGCATTAGCCTGCAAAAACACTTGGACACGCATCCCAAGGAGCAGGTGATCGAGGCGCTCATACGAGCCAGCAGTGCTGGTGGTGCCTCGGCACTTCTCAGCCAGGCATGCGCTCAGCAGCCCCAGACCCCGGTAGTTACGCCGGTGCCGACGCCTACGCCGACGCCTACGCCTACGCCGTCGCCGATGATGCAGCCGCTGCCAACGGTGAGTCCGACCGCGGccctgccgccgccgccccagcagcagcagcagcatcagccgCCTGCGGCATCGCCCAGTCCACATGTTCCTCACGCCCCGTCGCCGTACCCGATTGGACCTATATACGAATGTCCACCTATTAACGCCATGATACCGCCACCGCAGTTTGCTTCATTCAGCTACCAACAATTCGTTAACAAtgGTACGATGATGATTCCTGCGCAATACGCAATGGCTCAGGCACAACCTCCCCAGACAAGTCAGATGATGCAAATGTTGTATAATCCATACGGAATGTATCATCAACAACAAATACCCACAGTTCAAATGATCTCGGCACCGCCAATGATGCCCACTTCGACGACTACGCTGCCTACGACGGTACCCGCTGTGACAACGCGCATGAGGCCGATCACGAGTACAAGCAACGTATCTCTCAGTGCTGTCAACGAAACAGCGTCAGGATCGCCACCGAGATCGTCGAATTGTACttcgcaacagcagcagcaacttcAGACACAGTTACAATCACAGGCACAACCACAATCACAGGCACAACCACAATCACAGGCACAATCACAGTCACAAGAGGAACCGGCATGTCAGgaacaaataattattggaAGAAACAAGCATCTCATTAGCAGAATGATATCTGGGCCTGACCGTATTCTGCCAGATTTAGAAATGCCTGGAACTCCTGAGCCAACTTCTCTTAAAGTTGTGGAAGAAAATACTACCTCCAATATGGAAGTAGAACACACACAAGAACCCACTGAAAGTAATTGTGTTCAGGAAGAAGAACATCAAGCTAATGAACAATATCAAAGAGAGGATCCACCAACTTTAATCAGTAATCGTGGTGAAGTCAATACTGATGATTACAAGACTGAAAGGATCCTACCAGATATTGAAGATAATGAGGAAATTGAATCCTTAATAGTACGAACTACAAATACAGTACAAAGTGATAAAAACAGTGAAACTGAAATAGAAAAAACTGTTGAACATATGGAAACTTCAACCTCCGTGGAAACAATAGAAGAGGAAGTCGCAGTATCTTCCCAATGCAATAAAGAAAGTCGTAGAGAATCTGAAAGTAAATCCAATGATGAGACGCGTACGGTTGAAAACGTAGAAACTCGTGATTTGTCTATTGAAGAATCTCAAACTTCTACTgcaaaaaaatctgaaattgaACACTTAAATCAACTTATCGTAAATATGGAATCGGAATTCAGTAACGTAGAAGTATCAAACAAAAATACTCAAGAGAAAGTCCAGGATGAGTGCCAGGGTACGTTGTCAGTGGAACCAAATGAAAAGCCAAGTGAAGAAGATGAAGCAATCAGTGTCTCATATCATAAAATTAGTCCGCAACCAATCGAATGCAAAATTATTGTAGCTCATGAAGATACTGATGTTTCATCAATCACTTCTACAGATTCAATACAATGTGACTTAGAAATTCAGAAAATAACTTCCAcgtatcattataaatattcacaatctttaccctgtaccccaattaacaagaaaaagttttatcgTTCGCTATCTCGTGCCTCTTTACGTTCCGATTTTGATCGTTCCAACGAAAATCTTTGCTCTTATCCGGTAGGATTTGAGGCTACTACGTTACAAGACTACCTCAAGGATAACTATAATGATGAAGATATGGAGTTGGAAGAACCTGAGTATCATTCTTATATGAAACCGAACAAGGAACTTGCAATTGAACGTGATAGATCGCGTACTCCTATGTCCGCAAGCCCAAGCAAGACTTCTGTTTTAAAAGCACGCCGTAGTAAAATGCCCAGCTCACCTATATCTGCACGGTCTTCGTCTTCATACTACCAGATGGAAGAAGAGGAAGATGAGGATGAAGAAGATTCGGATAGTGAAAGCTACAGTAGTGGTcgattaaatgaaaaagacgacgatgaagaagatgaagaagatcaATTAGAAGATGATAAGATCGAGATAAGcgaagagaagaaaaatataattttcttccagTCTACAGCTGATATCAATTCAGAAATTATGCAACAACGGCAACAACatcaacagcaacaacaacagcagcaacagatAGAAGAACAACAACGGCAAGAACAACCTACTAGCTTTAGGTCTCAAAGTTCAGTGACTGATATATACTCAGGTAGTCAGTTTCCTCTCGATCATCATTCAATAAACCAACAACAAACACAGCATCCCGATGTATCAGTACATCATGAAACTTATCCATTGTCTAATAGTGAGATCTCGCAAAATCTTCTTAACATATCTGAATGTGTCGATCCGACAACTAGTACGGACTCGAAGAGCTACTCCAGTTCAAAATCGGTAGTTCACAAACCAAGCACAGAACTACTTAACATCAGTGAAGATGCTCATGCAGGGCCTATGAACGTTTTTGAATTCGACGGACTCCAGATACTTGTGCCTAGCACATTTATTAGCGAATCTTCGCAAAAAGCTGTAAGCGGAACAAGTCAGCAATCTATGTCTAGCAGTGAAAATGGAGCGGGTAATGATGAAGAAGTAAAAAGTGTGAACATGAGGGCTGACGAAACGATGCCGGCTAGGGGAGAATTGTCAGAACAAGAGAGTAATGGCTGCACTGAACAATCAGCATGGCAGTTATATATGGGACATGAATCTTCGCGTATGTCAACATCATACGACTTAATGGCGCGCGAAAGCTGGGAAGAATCTGAAGGTTCGGATCATGATGACCATAACGGTGGACCACTCTTGGACAGTCGCTCTCTTGCCACTCACTTTACTTCCAGTCTCTTCCTTGATCGCGATCGAAAGACTCCAACTCGTCGCATTTTTAAATGCTCCCATTGTCCTGAAGTTTTCGAATGTCCTAAAGAACGACGCGTACACAGCACTATGGTACATAAAGAAGCAGGTCCGTCTAGTTGTAGTAATGACAATATGGACCAGTCGGagataaaagaaatcaaattgcTTGATGGTCGAGCGAACGTCTTTGATGATGTTTTTGTTCCTGGTGGCTTGCATGCTCAACAGACATATCACGTCCAACAACCACTACTCCATCAACTTCAGCCTCCCCAACACTCAAGTTCTGCAAAATCTGAGTCTGATACTAAGATCGATCCGTTAGATATAACAACTGCTAATGAAGTTACTTGCAATGTATGCAATCAACGGTTCAACAGTGAGAAATCATTGCAAATGCATCACAGGCGCGTACACATTACTACTGAACCAGTTAAGCGAGTTCGCGAGAATGCAAAATGTCAAATCTGCAATGAGGAGTTCACCTCTGTAGCGGCTTTTAATCTTCATCTGAAGGTACATCCTCTGGAGTGTAGTCAATGTGGCAAGTATTTCTatcgaaaacaaaattttaaactcCACATGAAAAGGCATCTAGGAATAAAACCATTCCCTTGTACTATTTGCGACAAGGCTTTCCTCACCAAACAAAAGCTTGACGAGCATATGAATGGCCACACTGGAAATGCTCCCGTGAAATGCAATCTTTGCAACGAAACATTTCGACGGTATTCAAATCTTACACAACACAAGAATCGTCACCacttaaacataaaaaagaaactaaaggACTACATATGCCACTGCGGCGAAGTTTTTCACACAAAGAAAAAGCTCGCTTGGCACAAAGAAACGCACGATGAAAAACCAAAAGCTTGCACTTACTGCAACGAACGCTTCATACACATGGCAAGTTTGACACGACACATGAGACGAGCTCATAATCGAAGATTTGTACCCGATGCGCAacgagaaaatgaaaatgttgaatgCCCAATCTGTAAATGTATTTACCTTCGGTCATCGCTTGCCGTACACATGCGCGTACATAATGGAGAACGTCCGTACGAATGTCAGGTTTGTTCTAAGGCGTTTAGTACCAAATGGAATCTGCAGCTCCATAAATGGACCCACGCTGCTCGTAGCACAAAACCATTCAAGTGTAACCAATGCAGCGCAGCATTTTATAGACACAGTGACTATACAGCCCACATGAATTCTCATAGGAACGTTAGGCCTTATACTTGTAATTACTGCGGAGCGCAGTTTATCAGAAAATATAATTGCTTGCGACACGTAAAAGAACACGAAGAAAATAAGGCGTATACATGTGACCTTTGTGGTAAGACTTTCCACAGGtcctattatttaaaagaacacTTGAGAGTGCACTCAGGTGCGAGACCTTACACTTGTCATATCTGTGGCAAGTCCAGCAGCACAAAGTCGAATCATAACAAACATGTGCGCATTCATCATGCACGTGAGCCTGTAAATACTGAGAATTAA
- Protein Sequence
- MDLSTAVSTMTAGAAGNGGGGNGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSAGGASALLSQACAQQPQTPVVTPVPTPTPTPTPTPSPMMQPLPTVSPTAALPPPPQQQQQHQPPAASPSPHVPHAPSPYPIGPIYECPPINAMIPPPQFASFSYQQFVNNGTMMIPAQYAMAQAQPPQTSQMMQMLYNPYGMYHQQQIPTVQMISAPPMMPTSTTTLPTTVPAVTTRMRPITSTSNVSLSAVNETASGSPPRSSNCTSQQQQQLQTQLQSQAQPQSQAQPQSQAQSQSQEEPACQEQIIIGRNKHLISRMISGPDRILPDLEMPGTPEPTSLKVVEENTTSNMEVEHTQEPTESNCVQEEEHQANEQYQREDPPTLISNRGEVNTDDYKTERILPDIEDNEEIESLIVRTTNTVQSDKNSETEIEKTVEHMETSTSVETIEEEVAVSSQCNKESRRESESKSNDETRTVENVETRDLSIEESQTSTAKKSEIEHLNQLIVNMESEFSNVEVSNKNTQEKVQDECQGTLSVEPNEKPSEEDEAISVSYHKISPQPIECKIIVAHEDTDVSSITSTDSIQCDLEIQKITSTYHYKYSQSLPCTPINKKKFYRSLSRASLRSDFDRSNENLCSYPVGFEATTLQDYLKDNYNDEDMELEEPEYHSYMKPNKELAIERDRSRTPMSASPSKTSVLKARRSKMPSSPISARSSSSYYQMEEEEDEDEEDSDSESYSSGRLNEKDDDEEDEEDQLEDDKIEISEEKKNIIFFQSTADINSEIMQQRQQHQQQQQQQQQIEEQQRQEQPTSFRSQSSVTDIYSGSQFPLDHHSINQQQTQHPDVSVHHETYPLSNSEISQNLLNISECVDPTTSTDSKSYSSSKSVVHKPSTELLNISEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSGTSQQSMSSSENGAGNDEEVKSVNMRADETMPARGELSEQESNGCTEQSAWQLYMGHESSRMSTSYDLMARESWEESEGSDHDDHNGGPLLDSRSLATHFTSSLFLDRDRKTPTRRIFKCSHCPEVFECPKERRVHSTMVHKEAGPSSCSNDNMDQSEIKEIKLLDGRANVFDDVFVPGGLHAQQTYHVQQPLLHQLQPPQHSSSAKSESDTKIDPLDITTANEVTCNVCNQRFNSEKSLQMHHRRVHITTEPVKRVRENAKCQICNEEFTSVAAFNLHLKVHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTICDKAFLTKQKLDEHMNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDLCGKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01469939;
- 90% Identity
- iTF_01469939;
- 80% Identity
- -