Ttub002006.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Torymus tubicola
Gene Symbol
PAXBP1
Assembly
GCA_035583055.1
Location
JAWWEQ010000006.1:22826-40831[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-28 4.7e-24 87.0 0.9 1 272 537 747 537 749 0.93
2 2 0.63 1.7e+04 -3.4 0.0 30 91 1180 1241 1171 1245 0.82

Sequence Information

Coding Sequence
ATGTCGCTGTTCAACAAACTCAAGCGGAACATCCGTCGTCGGCATTTTAATGATGAGGAGGAGGACAATGAAAACAAATCAATGGAAAGCGATGATATACAAAATGTTAGGCAAAAAGTCAAAAAGAAAGATAAACCCAAGCAGACCCTCCTAAGTTTTGGAGAAGAATTGGAGGAAGCTGATGAAGGAGAAGTCTTCAAAGTGAAGAAATCATCAAGAAGTAGAAGACTGATGAAACAACTTGACcaggagaggaagaaaaagaaaggtgaAGAGAAAATGCAAGTGGACTCTGACTCAACAAACATGTCTTATATGCAGGAAAaagatttagaaataaaaacagatGATCTAGTAgttaaaataaagaatacagGACCAATGATTTTAAACGGACGAGATGCTCTGACAGCTGGTAAAGATGACTACACTTCTGAGGATGAACCCGAAGATGGCAAAGGACACAAGTTTAAACCTAAATCAGATAGAtcagaaaatatgaaatttttccttgaaaGTGGATGCATACCAGATGCTGCAATGATTCATGCAGCACGAAAGCGCAGACAAAAAGCTAGGGAACTTGGTCATGATTACATTCCAGTAGAAGAACAAGGagATGAAAAAGGAAAATCTAGGCTAGTGCGCGAAGAAGAGCACGACCGAAGCGATGAAGACTCTCAGGAAAGAATCAATATGACTGTTAATACTGAGGCTTTAGATAAAGAAAAACGACGACAAGCTTTCCTTGAATCACAAGCGCCACCAGAAAAATtatctGATGAAGAAAGTGaaccagaagaagaagaatgggAAGTTCAACAAATTAGAAAAGGTGTTACTGGAGCacagATCGCAGCGGCTCATCAGGATTCTATGATGCAGTATAGTTCAATAGGAATAAATCCTCAAATGTCAGAACCAGGAATTCCAATATTGATATCCAATATGATTCCAGCAGCCCCTCCACCTCCTATGATACAGCCACCAGATCCTACGAAATGTGTTCCTATTACACCTGAAGAAGTATTACAAAAATTGCGAGAAAggtTGAATAATTTGAAAGACGTCCTTGTAAGGCATGAATTGAATTACGAAGCAGTAGAGCAAGAATATGCTCAAAGCAAGAAAGAGTTGGAAGGTCCATGCCGTTCATCTGAGATGGCTCAACGCTACAAATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGCTGCCTCTGGTTAATGCATTGGAGTGTCGTTGGGTAGACTTGTATGGAGATCGAGCAACAGAATTAATGGAAAGACGAAGACAAGATACAAGAGATCAAGCAGAAGAAGTTACAACAGCTGCAAGGGGACCAGTTGTAAGAAGAGGTCCAGAGGATGATGCACGAATGAGACGAGCTACTGAAAGAGAGGGTAGAAGAGCGCGCCGCCGAAGAGCAAGAGAACTAGCCCCTGTATTACCAAGACACATGGACGGCATGTCTAGTGATGATGAAGTTACGGAACAACAAAATCTTGTTTTTAGACAAACGAAAGaggaaattgaaaaagaatctcGGGAGTTGTTTGTGGATGTAGAAGACGAATTTTCCACACTACGAGGAATCTTGACAAAGCTCGAAAACTGGAGGACCACCGATATGGATACGTATAAAGAAGCGTATGTTTCTCTTTGCATTCCAAAAATGATTTCCCCGATAATTCGCCTTCAAATTATTTCATGGAATCCAATCATGGAAAGCGCCGAACTCGAAAGGTCAAAGTGGTACAATTCTTTACTTATGTACGGTTTAACTACCAAGGAAACTGAAGAGTCTCTGCGACGCGATCCCGACGTTCGTTTAATTCCCTTAACAATAGAAAAAGTTATAGTACCAAAATTGACGATAATCGTTGACAAAATTTGGGATCCAATGTCCACATCACAAACTCTCCGATTAGTTGGAATAACGAATCGCCTAATCAGGGATTATCcaaatttaaatgaaactaGTAAACAATTAGAAGCATTGTTTAACGCAATTTTAGAGAAAATTGAAGCAGCTGTAGAAAACGATGTTTTCATTCCAATATTTCCAAAACAaattatggATCCAAAGCACTCGTTCTTTCAACGTCAATTCGCTATGGCTATTAAATTACTTCGAAATTTGCTGAGTTGGCAGGGTTTAATTGGCGATaccagattaaaaaatattgctttagGATCGCTACTAAACAGATATCTTTTGGCAGGATTGCGAGTTTCTGCGCCGGCAGATGCTCTTGTCAAAGCAAATATgattatgaGTACACTGCCCCGAGCATGGTTGCAAGGAGAAACAattgaacatttaaaaatgtttgcaacCTTAATTCAGCAATTGAGTGAACAACTTGATCAGGCTAACCCAGCTCATAATGTCGGAGGGTTTTTGATACCaggaaaagaatatattttcgaATATGAAGCTACGGCAAGTGCGGGTGTATTAGTGCCGTCAAAAGCACAATCAGCTTGGGGTTTTTCCGGTTTGTTAGTAGTTCAAACTGACGAAGAAGCTGCTTGGATGCAGtTTCAATCTCTAAAAAGCAAAATTTCCAATGGTAATGATGAACTTAATATGGAAAAAGATGCTGTAAAATTAGACGGGCCTATAGAGGAATTGCAAAAACCCTTTAAAGTTCAATATAAAATGGGGCAAGTTGAAAATTTCAGTGTGGAAATTACTGAAGCAGTTTGGGTCACAAATATCAAAAGAAGTGTTGCTGGAATTTTGCAGCTAGATTTAACTTCTTTAGATTCTCAAGTTGCTTTTCATTCTGTTGAAgTAAATCACTATGGTCAGTGTACAATTGAATATGTTGTAACAATTGAATCTGAAAGTAAAAGAATTATACGCAAATCAGTAGATCCTAGAACATGTGTAGGTCATCCACATCGAACATGGAGTAATGTTCCTAAAATGCCTTGTCCTAACAGTGATCAAaaTCCAGTATTAAAATCCAGTGAAAGATTTTATGAGATATCTGTTGCTAATAATAGAACTAAACTTTTACGTGTCAATGCAACTGGTGAAATTTTTGTTCAGCCATTTCAAAGTCTTGGTGAAGCTCAGTTTATGGTTACTAAccaacaattcaaattaatatcagaaaaagatCAATCAGAAGTAACTCTTATACCAGGCAATTTACATGTAAAACATTTACAACATGAGTTACCTGGGGATGACTTAACACAAGGTAGAGGAACTCCAGATAAACCAGCTATTTTCAAATCTATAAGTGCACTTTTAGATCGACTAAGTCAAAGACTTGAAAACCCTGGTTTAGATACAGAAATTAATAATCTTCACAATACAACCATatctgttttattatattatcttggGATGTTAAATAGAGCTGATTTACAAGcagcttataataatatttctggGACCAGCTATAAAGAAGAGACAGTTAGaaatatgtttttagaaGCTCTGCCGCAAGTTGGAACTACAGAATCAGCATTATTTGTTTTAGAACTTATTCAGTCACAAACTGTTTCAGACATAACAGCAATACAGTTATTAACACATCTTCCATTTCATGTGAGGAAGCCTGATGTGCAACTACTATTAGGATTGCAACCATTATTAAATCTTCATCCCAAAATAGCTTCAGAAGTACAGCATACTGGAATACTTACTTTTGGAACTTTAGTTTATAAAACCTGTCTTTTTTACTGTCCTTACGAAATGCTTGATGATTATGTTAGActttatttagataaatttacAGagagTAAAGAATATGAGAAGAAAATGGTTTGGTTGGAAGGTTTATCTAATATTCAACTTGGACGAGTTGTTGAATTTTTAGAACCTATTGCAAGTGGAAATAGTGCAGAGTCTAGACATCTGAGAGTTCTTGCTGCTTGGGCTTCTTTACCTACAGCTCCACTTCGACCAGACGTGatttaTCCAGTGTATTGGCCTATTCTTGTGAATCGAACTGAACATTTAGAAATGCGAATCGCTgcattaactttattaatagtTTCGAATCCAGCACCCAGTCGTTTAATTTCTCTATATTGGTATTTGAAAGGAGAACCTAGTCCTCatctttacaattatttttatacaacattaAAGTCAATAGAACGCACAAAGTTTCCATGTTATACTCATATGGGTGGAATAGCAGCACAGTTTGCTCGAATTCTTAAAAAGCCACCACCAAATCAACACATCATTACCGGAAACTATTTAGTTGATTATCAAGATTCTCGAAGACATTTTGGTGCAGTTATTAATGGAATTGTAATTGCTAATTCGTTAACAAATATTCCAGAAGTGGCTTATATTACTTTGAATAATCATGGTACTGGACTTGATTTAAATCACGTTTCATTATACATTAAAGCTGAAGGATTTCTTCATGCAATTTCAACGAATTTGAATGATTTGAGTTTATCAACTCGTGTAGAAGATATTCTGAAACAATTCAAGTTTGAAAAACTATCGACTAATCCAGTACATCTAGAAATCATTGCTAAAGTACAGCAAAAAGCTGTGTTATGTTTACATCTCAATCAAACAAACCttgtaaaagcttttaaatATTTGTCAACTCTACAGGATAGTACATATCACGTTTATCAAACTATGGAATTTCATGTAAACCAACAAAGAATTCATGTTCCTCTAACAATGGAATCCATTCAAGTAACAGATTTGGGCACAAATGTGAGATTAGCAGCTACAGCAACATCTCTTTTCTCCATGAGAGGTAATTTTACTCATACACCAAATGGAAGGAATAATCATTTCATATTGagaacATCAATTCATGGAACTGaagtaatagaaaattataatccATTAAATGATCTCTGGCATGCAGCTGAAAGAGCTCAGTCTATCCATGGTTATCTTCCTATCAATGTTACATTTGGATTTCAAGAAaagcttttcttttcttataatacTCCTGAGGAAAAGCTGAGAGCTGGACTTACAGCGCATGTAAGAACAGTAACAAATATTAGAGGTTCTAAAGTACAAGAGAAATTAAAGTCTGTATGTCCCAATTGTGTGAAGTTATATACTGTAAAACGTCTGCCTCATAAAGAAACTAAAtcgGACAGTTTATTTGTGATAAAGGCACCAGAGTTAGGAGGTTTGTTTGGCGTGAAAGTATTTGATTGTGAAGATAGGATTCCATCAGAAGAGTTTATGATTGCAGATGTTTTATCATCTCACCAAAGTAATTGCCGTATATGGCCTTTACTTGAAACAGTTTTGTTAGGAttacatttatttgattatttgtcTTATGTACCACCAGCTGGAAGTTGTGGTTTGGAAGCATACATTGAGCCAATTAGTACACAATCATCAGAgattagatTTGAGTacatgaaaaaagataaataccACATGTTTGCTCTTACTAGACGTAATCTGAATAAGGTTCAAATACTTCAACAGTGGAATATTGCTGTTGCATATGACGTAACAAGTTGGCTTTCAgacacattaaaaattaaagcaaGTAGAAGTTCAGCtggagaaaaaattatgaaggtATGTAttgaaggagaaagagaaacacCTTGGGATTGGGATTTCTTAAGCATAAAACCCAGTGACCCCTCTgcaatcaaattgaatattgtGTGGGGTGAAGCTGATTCTGCAAAAGGAAAATGCAGTGGTTCTTCATTACTCATAAATTTAGCTGGTGAAATAACACAGAATCAAATTttggaaagtaaaaaaaatatatggccATATAATGAATGCCAAGCACAAGCAAATGGCAAATCATTTATCCCATATACAGAAGCTTGCTATGAAGCTTCACGAGAAATGTCAACacttagaaaatataaaatagatattaaacatgaaaatCTACCacaagaatttgaaaaaatagcaTGGAAATTAAAAGCTCTTTTTGATCTAGCTGGAGGAAATAGTAGTAAAAGTTTACAAAGTGCAGACCAAATCTCAATTTCAGCAACCTTCCCCAAAGACTCTAGTCAGGGTGAATTGCAATTTAATggagaaaaaattcaaactgaGTTCAGTAGTGTCTTTACGAATAATCTCTTAATACGAAGCAGATTGCATAAATATAtggatagtttatttttaagatcATTCTTTaGTACATGTGTATTGACTCCCAATATTATTACATCCTCAAGCAACATTACaaatactttcaataaaaatactgaaagaATAATTCTTGCTCGATGCGATGATAATAATCCTCGATTTGCCCTATCTGCTGTTAATAAAGgaaattttgttgaattaaCACTTGATGACGAGACTGATAGAATAGTTTTAAGTTCCAATGGTGAAGGTGGTGTTGTTCACAATCATACTAATCCAGTGCCTTTAGcaagaaattttgaatttgcatATATTGGATCAAAATGggTAAGAATGGATAAACAGACTGTTGACCTTGTAGTTgcagaaattttactttttatacattgGTCACAAGAACAGATACTCCTTTTTTATCCGAATTATATTCAGGAATTTGTTTGTGGATATTGTACACTGCAAAGTACAGCTGCAGATAATCTTTATGAAAAGCTTTAG
Protein Sequence
MSLFNKLKRNIRRRHFNDEEEDNENKSMESDDIQNVRQKVKKKDKPKQTLLSFGEELEEADEGEVFKVKKSSRSRRLMKQLDQERKKKKGEEKMQVDSDSTNMSYMQEKDLEIKTDDLVVKIKNTGPMILNGRDALTAGKDDYTSEDEPEDGKGHKFKPKSDRSENMKFFLESGCIPDAAMIHAARKRRQKARELGHDYIPVEEQGDEKGKSRLVREEEHDRSDEDSQERINMTVNTEALDKEKRRQAFLESQAPPEKLSDEESEPEEEEWEVQQIRKGVTGAQIAAAHQDSMMQYSSIGINPQMSEPGIPILISNMIPAAPPPPMIQPPDPTKCVPITPEEVLQKLRERLNNLKDVLVRHELNYEAVEQEYAQSKKELEGPCRSSEMAQRYKYYQELRGYVTDLVECLDEKLPLVNALECRWVDLYGDRATELMERRRQDTRDQAEEVTTAARGPVVRRGPEDDARMRRATEREGRRARRRRARELAPVLPRHMDGMSSDDEVTEQQNLVFRQTKEEIEKESRELFVDVEDEFSTLRGILTKLENWRTTDMDTYKEAYVSLCIPKMISPIIRLQIISWNPIMESAELERSKWYNSLLMYGLTTKETEESLRRDPDVRLIPLTIEKVIVPKLTIIVDKIWDPMSTSQTLRLVGITNRLIRDYPNLNETSKQLEALFNAILEKIEAAVENDVFIPIFPKQIMDPKHSFFQRQFAMAIKLLRNLLSWQGLIGDTRLKNIALGSLLNRYLLAGLRVSAPADALVKANMIMSTLPRAWLQGETIEHLKMFATLIQQLSEQLDQANPAHNVGGFLIPGKEYIFEYEATASAGVLVPSKAQSAWGFSGLLVVQTDEEAAWMQFQSLKSKISNGNDELNMEKDAVKLDGPIEELQKPFKVQYKMGQVENFSVEITEAVWVTNIKRSVAGILQLDLTSLDSQVAFHSVEVNHYGQCTIEYVVTIESESKRIIRKSVDPRTCVGHPHRTWSNVPKMPCPNSDQNPVLKSSERFYEISVANNRTKLLRVNATGEIFVQPFQSLGEAQFMVTNQQFKLISEKDQSEVTLIPGNLHVKHLQHELPGDDLTQGRGTPDKPAIFKSISALLDRLSQRLENPGLDTEINNLHNTTISVLLYYLGMLNRADLQAAYNNISGTSYKEETVRNMFLEALPQVGTTESALFVLELIQSQTVSDITAIQLLTHLPFHVRKPDVQLLLGLQPLLNLHPKIASEVQHTGILTFGTLVYKTCLFYCPYEMLDDYVRLYLDKFTESKEYEKKMVWLEGLSNIQLGRVVEFLEPIASGNSAESRHLRVLAAWASLPTAPLRPDVIYPVYWPILVNRTEHLEMRIAALTLLIVSNPAPSRLISLYWYLKGEPSPHLYNYFYTTLKSIERTKFPCYTHMGGIAAQFARILKKPPPNQHIITGNYLVDYQDSRRHFGAVINGIVIANSLTNIPEVAYITLNNHGTGLDLNHVSLYIKAEGFLHAISTNLNDLSLSTRVEDILKQFKFEKLSTNPVHLEIIAKVQQKAVLCLHLNQTNLVKAFKYLSTLQDSTYHVYQTMEFHVNQQRIHVPLTMESIQVTDLGTNVRLAATATSLFSMRGNFTHTPNGRNNHFILRTSIHGTEVIENYNPLNDLWHAAERAQSIHGYLPINVTFGFQEKLFFSYNTPEEKLRAGLTAHVRTVTNIRGSKVQEKLKSVCPNCVKLYTVKRLPHKETKSDSLFVIKAPELGGLFGVKVFDCEDRIPSEEFMIADVLSSHQSNCRIWPLLETVLLGLHLFDYLSYVPPAGSCGLEAYIEPISTQSSEIRFEYMKKDKYHMFALTRRNLNKVQILQQWNIAVAYDVTSWLSDTLKIKASRSSAGEKIMKVCIEGERETPWDWDFLSIKPSDPSAIKLNIVWGEADSAKGKCSGSSLLINLAGEITQNQILESKKNIWPYNECQAQANGKSFIPYTEACYEASREMSTLRKYKIDIKHENLPQEFEKIAWKLKALFDLAGGNSSKSLQSADQISISATFPKDSSQGELQFNGEKIQTEFSSVFTNNLLIRSRLHKYMDSLFLRSFFSTCVLTPNIITSSSNITNTFNKNTERIILARCDDNNPRFALSAVNKGNFVELTLDDETDRIVLSSNGEGGVVHNHTNPVPLARNFEFAYIGSKWVRMDKQTVDLVVAEILLFIHWSQEQILLFYPNYIQEFVCGYCTLQSTAADNLYEKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01467976;
90% Identity
iTF_01467976;
80% Identity
-