Tsin007526.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Torymus sinensis
Gene Symbol
PAXBP1
Assembly
GCA_030522985.1
Location
JAPYZP010004301.1:9581-29850[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.8e-29 1.7e-24 88.8 1.2 1 272 537 747 537 749 0.92
2 2 0.81 2.8e+04 -3.7 0.0 32 91 1182 1241 1172 1244 0.81

Sequence Information

Coding Sequence
ATGTCGCTGTTCAACAAACCCAAACGGAACATCCGTCGGCGGCCCTTTAATGATGAGGAGGAGGATAATGAAAACAAGTCGATGGAAAGCGatgatatacaaaattttaaacaaaaagtcAAAAAGAAAGATAAGCCCAAGCAGACCCTCCTAAGTTTTGGAGAAGAGTTGGAGGAAGctGATGATGGAGAAGTCTTCAAAGTGAAGAAATCATCAAGAAGCAGAAGACTGATGAAACAACTTGACcaggagaggaagaaaaagaaaggtgAAGAGAAATTGCAAGTGGACTCTGACTCAACAAACATGTCTAATATGCAGGaaaaagatttagaaataaaaacagaTGATCTAGTAgttaaaataaagaatacagGACCAATGATTTTAAATGGAAGAGATGCTCTAACAGCTGGTAGAGATGACTATACTTCTGAGGATGAACCCGAGGATGGCAAAGGACACAAGTTCAAAGCTAAGTCAGATAAAtcagaaaatatgaaatttttcctTGAaaGTGGATGCATACCAGATGCTGCGATGATTCATGCAGCACGGAAGCGCAGACAAAAAGCAAGGGAGCTTGGTCATGATTACATTCCAGTAGAAGAACCAGGagATGAAAAAGGAAAATCTAGGCTAGTACGCGAAGAAGATCACGACCGAAGTGATGAAGACTCTCAAGAAAGAATTAATATGACTGTTAATACTGATGCTTTAGATAAAGAAAAACGACGACAAGCTTTCCTTGAGTCACAAGCCCGAACAGAAAAATtatctGATGAAGAAAGTGAACCTGAAGAAGAAGAATGGGAAGTTCAACAAATTAGAAAAGGTGTTACTGGAGCACAgATTGCAGCAGCTCATCAGGATTCTATGATGCAGTATACCTCAATGGGAATAGGTCATCCAATGTCAGAACCAGGAATTCCAATATTGATGTCCACTATGATTCCAGCAGCTCCTCCACCTCCTATGATACAGCCACCAGATCCTACAAAATGTGTTCCTATTTCACCTGAAgaagtattacaaaaattacgagaaaggttGAATAATTTGAAAGACGTCCTTGTAAGGCATGAATCGAATTACGAAGCAGTTGAGCAAGAGTATGCTCAAAGCAAGAAAGAGTTGGAAGGTCCATGCCGTTCATCTGAGATGGCTCAACGCTACAAATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGCTGCCTCTGGTCGATGCTTTGGAGTCTCGTTGGGTAGACTTATATGGAGATAGAGCATCAGAATTAATGGAAAGACGAAGACAAGATACAAGAGATCAAGCAGAAGAAGTTACAACAGCTGCAAGAGGACCAGTCGTAAGGAGAGGTCCAGAGGATGATGCACGAATGAGACGAGCTACGGAAAGAGAGGGCAGAAGAGCGCGCCGCCGAAGAGCAAGAGAACTCGCTCCTGTATTGCCAAGACATATGGACGGAATGTCTAGTGATGATGAAGTTACAGAACAACAAAATCTAGTTTTCAGACAAACGAAAGaggaaatagaaaaagaatcCCGGGAGTTGTTTGTGGACGTAGAAGACGATTTTTCCACGCTCCGAGGAATCTTGACAAAGCTGGAACACTGGAGGACAACCGATTTCGACACGTACAAAGAATCGTATGTTTCTCTTTGTATTCCAAAAATGATTTCTCCTATAATTCGCCTTCAAATTATTACGTGGAATCCAATCATGGAAAGTGCTGAGCTTGAAAGGTCTAAGTGGTTCAATTCTTTACTTATGTACGGTTTAACTACACGGGAAACTGAAGAATCTCTGCGACGCGATCCCGACGTTCGCTTAATTCCCTTAACAATAGAAAAAGTTGTCGTTCCAAAATTGACAACAATCGTTGAAAAAATTTGGGATCCAATGTCCACATCACAAACGCTTCGGTTAGTTGGGATAACGAATCGACTAATCAGGGATTATCCAAATTTAAATGAAACTAGTTCGAAATTAGAAGCATTGTTTAACgcaattttagagaaaattgaGGCAGCAGTTGAGAACGATGTTTTTATACCAATATTTCCAAAACAaaTTATGGATCCAAAGCATCCGTTTTTTCAACGCCAATTCGCAATGGCTATTAAATTACTTCGAAATCTGCTGAGTTGGCAGGGTCTAATCGCCGatactaaattaaaaaacattgcTTTAGGATCGCTACTAAACAGGTATCTTTTGGCAGGATTGCGAGTTTCTGCGCCGGCGGATGCTCTCGTTAAAGCCAATatgaTCATGAGTACACTGCCCCGAGCATGGTTGCAAGGAGAAACAATTGaacatttgaaaatgtttgcAACCTTAATTCAGCAATTGAGTGAACAACTCGATCAAGCTAACCCAGCTCAtaaTGTCAGAGGATTTTTGATACCAGGAAAAGAGTACATTTTTGAATATGAAGCTACGTCAAGTGCGGGTGTATTAGTGCCGTCAAAAGCACAATCAGCTTGGGGTTTTTCCGGTTTATTAGTAGTTCAAGTTGACGAAGAAGCTGCTTTGATGCAGTTTCAATCTTTAAAAAGCAAAATTTCCAATGGTAAAGATGAACTTAATATGGAAAAGGATGCTGTAATATTAGATGGACCTATAGAAGAATTGCAAAAACCCTTCAAAGTTCAATATAGAATGGGACAAGTTGAAAATTTTAGTGTAGAAACTACTGAAGCAGTTTGGGTCACAAATATCAAACGGAGTGTTGCTGGAATTTTGCAGCTTGATTTAACTTCTTTAGATTCTCAAGTTGCGTTTCATTCTGTTGAagTAAATCATTATGGTCAGTGCACAATTGAATATGTTGTAACAGTCGAATCTGAGAGTAAAAGAATTATACGTAAATCAGTAGATCCTAGAACATGTATTGGACACCCACATCGAACATGGAGTAATGTTCCTAAAATGCCTTGTCCTAACAGTGATCAAaatccAGTATTAAAATCCAGTGAAAGATTTTATGAGATATCTGTTGTTAATAACAGAACTAAGCTTTTACGTGTTAATGCGACTGGTGAAATTTATGTTCAACCATTTCAAAGTCTTGGTGAAGCTCAGTTTATGGTTACTAAccaacaaattatattaatatcagAAAAAGATCAATCAAATGTAACTCTTGCACCAGgcaatttacatataaaacatTTGCAACATGAGTTACCAAGTGATGACTTAACACAGGGTAGAGGAACTCCAGAAAAaccagttatttttaaatcaATAAGTGCACTTTTAGATCGACTAAGTCAAAGACTTGAAAATCCTGGTTTAGATACTGAAATTAATAATCTTCACAATACAACCATATCTGTTTTATTGCATTACCTTGGAATGTTGAATAGAGCTGATTTACAAGCagcttataataatatttctggaACCAGCTATAAAGAAGAGACTGTAAGAAATATGTTTTTAGAAGCTCTACCACAAGTTGGAACTACAGAATCAGCATTGTTTGTTTTGGAACTTATTCAGTCACAAACTGTTTCAGACATAACAGCAATACAGTTATTGACACATCTTCCATTTCACGTCAGAAAACCTGATGTGCAACTACTATTGGGATTGCAACCATTATTAAATCTTCATCACAAAATAGCTCCAGAAGTACAGCACACTGGAATACTTACTTTTGGAACATTAGTTTATAAAACCTGTCTTTTTTACTGTCCTTATGAAATGCTTGATGATTATGTTAGActttatttagataaatttaCAGagaGTAAGGAGTATGAGAAAAAAATGGTTTGGTTGGAAGGTTTATCTAATATTCAACTTGGACGAGTTGTTGAATTTCTAGAACCTATTGCAAGTGGAAACAGTGCAGAGTCTAGACATCTGAGAGTTCTTGCTGCTTGGGCTTCTTTACCTACGGCTCCACTTCGACCGGATGtgatatatccAGTATATTGGCCTATTCTTGTGAATCAAACTGAACATTTAGAAATGCGAATTGCTGCATTAACATTATTAATAGTTTCTAATCCAGCACCTAGCCGCCTGATTTCTTTATATTGGTATTTAAAAGGAGAACCTAGTCCTCatctttacaattatttttatacaacatTAAAGTCAATAGAACGCACAAAGTTTCCATGTTATACCCACATgGGTGGAATAGCAGCACAGTTTGCTCGTATTCTTAAAAAGCCACCACCTAATCAACATATTATTActgggaattatttattcgattaTCAAGATTCTCGAAGACATTTTGGTGCAGTTATTAATGGAATTATAATTGCCAATTCTTTAACAAATATTCCAGAAGTGGCTTACATTACTTTGAATAATCATGGTACTGGTCTTGATTTAAATCATGTTTCAcTGTATATTAAAGCTGAAGGATTTCTCCATGCAATTTCAACGAATTTGAATGATTTAAGTTTATCAACTCGTGTGGAAGACATTCTGAAACAATTCAAGTTTGACAAACTATCAACTAATCCAGTACATCTAGAAATCATTGCTAAAGTACAACAAAAAGCTGTATTATGTTTACATCTAAATGAAACAAATCTTGtaaaagcttttaaatATTTATCAACTCTACAGGATAGTACATATCACGTTTATCAAACTATGGAATTCCATGTAAACCAGCAAAGAATTCATGTTCCTCTAACAATGGAATCCATTCAAGTAACAGATTTGGGTACAAATGTGAGATTAGCAGTTACAGCAACATCTCTTTTCTCGATGAGAGGCAATTTTACTCATACACCAAATGGaagaaataatcattttatattgaggACCTCAATTCATGGAACTGaagtaatagaaaattataatccATTGAATGATCTCTGGCATGCAGCTGAAAGAGCTCAGTCTATCCATGGTTATCTACCAATCAACGTTACATTTGGATTTCAAGAAaagcttttcttttcttataatacTCCTGAAGAAAAACTGAGAGCTGGACTTACAGCTCATGTAAGAACAGTAACAAATATTAGAGGTTCTAGAGTACAAGATAAATTAAAGTCTATATGTCCAAATTGTGTGAATTTGTATACTGTAAAACGCCTGCCTCATAAAGAAACTAAAtctgACAGCTTATTTGTAATAAAGGCACCAGAGTTAGGAGGTTTATTTGGCGTGAAAGTATTCGATTGTGAAGATAGAATTCCAACAGAAGAGTTTATGATTGCAGATGTTTTATCATCTCACCAAAGTAATTGTCGCATATGGCCTCTACTTGAACCAGTTTTGTTAGGGTtacatttatttgattatttgtCTTATGTACCACCAGCTGGAAGTTGTGGTTTGGAGGCATACATTGAGCCAATTAGTATACAATCATCAGAgatTAGATTTGagtatacaaaaaaagataaataccaCATGTTTGCTCTTACTAGACGTAATTTGAATAAGGTTCAAATACTACAACAGTGGAATATTGCTGTTGCATATGAAGTTACAAGTTGGCTTTCAGACACATTAAAAATCAAAGCCAGTAGAAGTTCAACTGGGGAAAAAATTATGAAGGTATGTATTGAAGGAGAAAGGGAAACTCCTTGGGATTGGGATTTCTTAAACATAAAACCCAGTGACCCCTCTGCAATCAAATTGAATTTCGTGTGGGGTGAGGCTGATTCAGCAAAAGGAAAATGCAGTGGATCTTCATTGCTTATAAATTTAGTTGGTGAAATAACCCAGGATcaaattttggaaagtaaacGAAATGTATGGCCATATAATGAATGCCAAGCACAAGCAAATGGCAAATCATTTATTCCGTATACAGAAGCTTGTTATGAAGCTTCACGAGAAATGTCAACATTTAGAAAATACAACATAGATATTAAACATGAAAATCTGCCacgagaatttgaaaaaatagcatGGAAGTTGAAAGCTCTTTATGATTTAGCCGGAGGAAACAGTAGTAAAAGTTTACCAAGTTTAGAccatattttaatttcaacaacCTTCCCCAAAGACTCTACTCAGGGTGAATTACAATTTAATGGAGACAAAATTCAAACGGAGTTCAATAGTGTCTTTACAAATAATCTTTTGATACGAAGCCGATTGCATAAATATAtggatagtttatttttaaggtCATTCTTCAGTACATGTATATTAACTCCCAATATTATTACATCCTCGGGCAACATTACAAgcactttcaataaaaatactgaaaGGATAATTCTGGCTCGATGCGATGATAATAATCCTAGGTTTGCCCTATCTGCTGTTAACAAaggaaattttgttgaattaacACTTGATGACGAGACTGATAGAATAATTTTAAGTTCCAATGGTGAAGGTGGGGTTGTTCACAATCATACTAATCCTGTGCCTTTAGCAAGAAATTTCGAATTCGCATATATTGGATCAAAATGggTAAGAATGGATAAAAAGACCGTTGACCTTGTAGTTgcagaaattttactttttgtacATTGGTCACAGGAACAGATACTCCTTTTTTATCCCAATTATATTCAAGAATTTGTGTGTGGATATTGTACACTGAAAAATACAGTTACAGATAATCTTTATGAAAAGCTTTAG
Protein Sequence
MSLFNKPKRNIRRRPFNDEEEDNENKSMESDDIQNFKQKVKKKDKPKQTLLSFGEELEEADDGEVFKVKKSSRSRRLMKQLDQERKKKKGEEKLQVDSDSTNMSNMQEKDLEIKTDDLVVKIKNTGPMILNGRDALTAGRDDYTSEDEPEDGKGHKFKAKSDKSENMKFFLESGCIPDAAMIHAARKRRQKARELGHDYIPVEEPGDEKGKSRLVREEDHDRSDEDSQERINMTVNTDALDKEKRRQAFLESQARTEKLSDEESEPEEEEWEVQQIRKGVTGAQIAAAHQDSMMQYTSMGIGHPMSEPGIPILMSTMIPAAPPPPMIQPPDPTKCVPISPEEVLQKLRERLNNLKDVLVRHESNYEAVEQEYAQSKKELEGPCRSSEMAQRYKYYQELRGYVTDLVECLDEKLPLVDALESRWVDLYGDRASELMERRRQDTRDQAEEVTTAARGPVVRRGPEDDARMRRATEREGRRARRRRARELAPVLPRHMDGMSSDDEVTEQQNLVFRQTKEEIEKESRELFVDVEDDFSTLRGILTKLEHWRTTDFDTYKESYVSLCIPKMISPIIRLQIITWNPIMESAELERSKWFNSLLMYGLTTRETEESLRRDPDVRLIPLTIEKVVVPKLTTIVEKIWDPMSTSQTLRLVGITNRLIRDYPNLNETSSKLEALFNAILEKIEAAVENDVFIPIFPKQIMDPKHPFFQRQFAMAIKLLRNLLSWQGLIADTKLKNIALGSLLNRYLLAGLRVSAPADALVKANMIMSTLPRAWLQGETIEHLKMFATLIQQLSEQLDQANPAHNVRGFLIPGKEYIFEYEATSSAGVLVPSKAQSAWGFSGLLVVQVDEEAALMQFQSLKSKISNGKDELNMEKDAVILDGPIEELQKPFKVQYRMGQVENFSVETTEAVWVTNIKRSVAGILQLDLTSLDSQVAFHSVEVNHYGQCTIEYVVTVESESKRIIRKSVDPRTCIGHPHRTWSNVPKMPCPNSDQNPVLKSSERFYEISVVNNRTKLLRVNATGEIYVQPFQSLGEAQFMVTNQQIILISEKDQSNVTLAPGNLHIKHLQHELPSDDLTQGRGTPEKPVIFKSISALLDRLSQRLENPGLDTEINNLHNTTISVLLHYLGMLNRADLQAAYNNISGTSYKEETVRNMFLEALPQVGTTESALFVLELIQSQTVSDITAIQLLTHLPFHVRKPDVQLLLGLQPLLNLHHKIAPEVQHTGILTFGTLVYKTCLFYCPYEMLDDYVRLYLDKFTESKEYEKKMVWLEGLSNIQLGRVVEFLEPIASGNSAESRHLRVLAAWASLPTAPLRPDVIYPVYWPILVNQTEHLEMRIAALTLLIVSNPAPSRLISLYWYLKGEPSPHLYNYFYTTLKSIERTKFPCYTHMGGIAAQFARILKKPPPNQHIITGNYLFDYQDSRRHFGAVINGIIIANSLTNIPEVAYITLNNHGTGLDLNHVSLYIKAEGFLHAISTNLNDLSLSTRVEDILKQFKFDKLSTNPVHLEIIAKVQQKAVLCLHLNETNLVKAFKYLSTLQDSTYHVYQTMEFHVNQQRIHVPLTMESIQVTDLGTNVRLAVTATSLFSMRGNFTHTPNGRNNHFILRTSIHGTEVIENYNPLNDLWHAAERAQSIHGYLPINVTFGFQEKLFFSYNTPEEKLRAGLTAHVRTVTNIRGSRVQDKLKSICPNCVNLYTVKRLPHKETKSDSLFVIKAPELGGLFGVKVFDCEDRIPTEEFMIADVLSSHQSNCRIWPLLEPVLLGLHLFDYLSYVPPAGSCGLEAYIEPISIQSSEIRFEYTKKDKYHMFALTRRNLNKVQILQQWNIAVAYEVTSWLSDTLKIKASRSSTGEKIMKVCIEGERETPWDWDFLNIKPSDPSAIKLNFVWGEADSAKGKCSGSSLLINLVGEITQDQILESKRNVWPYNECQAQANGKSFIPYTEACYEASREMSTFRKYNIDIKHENLPREFEKIAWKLKALYDLAGGNSSKSLPSLDHILISTTFPKDSTQGELQFNGDKIQTEFNSVFTNNLLIRSRLHKYMDSLFLRSFFSTCILTPNIITSSGNITSTFNKNTERIILARCDDNNPRFALSAVNKGNFVELTLDDETDRIILSSNGEGGVVHNHTNPVPLARNFEFAYIGSKWVRMDKKTVDLVVAEILLFVHWSQEQILLFYPNYIQEFVCGYCTLKNTVTDNLYEKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01469676; iTF_01216771; iTF_01487026; iTF_00079928;
90% Identity
iTF_01469676;
80% Identity
-