Ttub008979.1
Basic Information
- Insect
- Torymus tubicola
- Gene Symbol
- -
- Assembly
- GCA_035583055.1
- Location
- JAWWEQ010000055.1:13386914-13389353[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.1e-12 1.5e-08 35.7 0.0 2 35 40 74 39 81 0.91
Sequence Information
- Coding Sequence
- ATGTGTTTGATAAGGGCCAAGTTGTTGGAATCGTCCCACGCTTGGCTCGGAGCCTCCACCTCCAGTATAGCAGCTGACTACTCGGCGATGATGAAGGTGAAGGCTCCAACATGGTCGCGACAAGAGCTACAAGAGGCAATCGAGGCTGTGGTCACGCAGAAGATGCGTTTCACCCAGGCGTCAAGCAAATACGGCATACCAAAAGGCACACTTTACGACAACATACTTGGCAAATCGAAAAGGATGATGGTACTGGAGGAAGCTGGTTTGGATCAGCCGGAAGAACAAGCTGTACTCGAGTTCTGTTGCGACATCAGTGTCAGTCCGTACAATCGACGTACCAAGAAATCACTTGGTGCTATACTCAATTATGTTGAAAAGTTGAGACGACAGCGTGATCCAAACTTTAGCTTTAACGGGTTATCGGGGTTTAGATGGTGGTGGGCGTTTTGCAAGAAGCATGGTATAGTGTCGCTCTACTTTAACGATGAGAATGATAACGAATGA
- Protein Sequence
- MCLIRAKLLESSHAWLGASTSSIAADYSAMMKVKAPTWSRQELQEAIEAVVTQKMRFTQASSKYGIPKGTLYDNILGKSKRMMVLEEAGLDQPEEQAVLEFCCDISVSPYNRRTKKSLGAILNYVEKLRRQRDPNFSFNGLSGFRWWWAFCKKHGIVSLYFNDENDNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00969493;
- 90% Identity
- iTF_01467011;
- 80% Identity
- -