Basic Information

Insect: Torymus texanus
Gene Symbol: -
Assembly: GCA_036873485.1
Location: JAYJLV010000006.1:99733-102111[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.25 65 6.2 0.7 2 23 119 140 118 140 0.97

2 15 0.0001 0.027 16.9 1.7 2 23 145 166 145 166 0.98

3 15 7.7e-06 0.002 20.4 2.5 2 23 173 194 172 194 0.97

4 15 8.6e-07 0.00023 23.4 2.1 1 23 228 250 228 250 0.98

5 15 8.8e-05 0.023 17.0 0.4 1 23 256 278 256 278 0.98

6 15 1.9e-06 0.0005 22.3 2.5 1 23 284 306 284 306 0.97

7 15 1.9e-06 0.00049 22.3 1.8 1 23 312 334 312 334 0.96

8 15 6.4e-05 0.017 17.5 0.4 1 23 340 362 340 362 0.98

9 15 2.3e-05 0.0061 18.9 8.4 1 23 368 390 368 390 0.97

10 15 2.4e-08 6.3e-06 28.3 0.6 1 23 395 417 395 417 0.97

11 15 9.5e-05 0.025 16.9 0.3 1 23 423 445 423 445 0.97

12 15 5.7e-06 0.0015 20.8 7.6 1 23 451 473 451 473 0.97

13 15 2.2e-06 0.00058 22.1 0.6 1 23 479 501 479 501 0.99

14 15 4.9e-06 0.0013 21.0 0.4 1 23 508 530 508 530 0.99

15 15 0.00011 0.028 16.8 1.6 2 23 537 559 537 559 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.25	65	6.2	0.7	2	23	119	140	118	140	0.97
2	15	0.0001	0.027	16.9	1.7	2	23	145	166	145	166	0.98
3	15	7.7e-06	0.002	20.4	2.5	2	23	173	194	172	194	0.97
4	15	8.6e-07	0.00023	23.4	2.1	1	23	228	250	228	250	0.98
5	15	8.8e-05	0.023	17.0	0.4	1	23	256	278	256	278	0.98
6	15	1.9e-06	0.0005	22.3	2.5	1	23	284	306	284	306	0.97
7	15	1.9e-06	0.00049	22.3	1.8	1	23	312	334	312	334	0.96
8	15	6.4e-05	0.017	17.5	0.4	1	23	340	362	340	362	0.98
9	15	2.3e-05	0.0061	18.9	8.4	1	23	368	390	368	390	0.97
10	15	2.4e-08	6.3e-06	28.3	0.6	1	23	395	417	395	417	0.97
11	15	9.5e-05	0.025	16.9	0.3	1	23	423	445	423	445	0.97
12	15	5.7e-06	0.0015	20.8	7.6	1	23	451	473	451	473	0.97
13	15	2.2e-06	0.00058	22.1	0.6	1	23	479	501	479	501	0.99
14	15	4.9e-06	0.0013	21.0	0.4	1	23	508	530	508	530	0.99
15	15	0.00011	0.028	16.8	1.6	2	23	537	559	537	559	0.96

Sequence Information

Coding Sequence: ATGGACCcacaatatgtaaaaaatgaacCTGAGGATACATTGCCTATAAACTGTCAGGTTATGGATGAAAATATTGTAAGCGTTGTACTCAAGGAAGAACCAGGAGAAAAATACGAACCAAACTACATGGAGGATATCTGTTTGGGAACTTTTGATAAGGTTTTTCAACCTGTCGATCATCATGAGGTTGATTTTCCTGATGACATGgtTAAATTGGAGTTAGATACAGAAAACAATCACCATCACTGGGCAGCTCAACTAGCCAATATTACACTGTCTGAAAATGGTGAATATGAATTGGAAGAAGATCATCACTTTCTTAATTCAAGTGCAgcccaaaaattttataaaattcagtgTACACTctgtaaaaaatggtttttaaacAATGATTCTATGGTAACACATTTAAAAATGCATTGTAGTGGTAACACTTGTGAAGTTTGTCATCAGACTTTTATGGATAATGCAGGTTTACATGCGCATATGTTAACTCATGTTGGTATGAGTCCAGTAGAATGTACAATATGTCAAAAAAGATTTGCTTATAAATGGTGTTTACGCAATCACATGCAAACTCATATGACAAATAAGCAATTTGAGTATGATACTTTAcaacaagtttttttaaagagatatgGTCAAAGCAATGATCATGTGATTCGTATCGATGAAAGGCCTTACATGTGTCATATTTGTCAAACATCTTTCAAAGAAAAGGGAAATTTAAGCCGTCACATGTTGATTCATAGTGGGGACAAACCATATAAGTGTGATATTTGTTTTGCTTCTTTTCGAGAAAAAGCAAAACTAAACATGCACATATCAATTCACACTGgtcataaacaatttaaatgtaCAATGTGTCATCGATCTTTTGTACAGAAAACTGCATTAAATAATCATATGTTAGCACATAGCGGTGAAAAACCTCATGCTTGTAATGTTTGTGAAAAAACATACAAACGAAAATCTGAATTAATCAGACATACAATGATTCACACTGGAGAACGTCCATATGAATGTCAAGAATGCTTAATGACTTTTAGAGAAAAAGCAAAACTCAACTCCCACATGTTAGTTCATACAGGTGAAAAACCACATGAGTGCCACATATGTCATAAAACTTGTGCTCGTAAATCAGACTTAAATAGTCATATGCTTTCACATACTGGAGGCCAATATGACTGTAAAGTTTGTGATAAAATTTTCACTCGTAAATCAGATTTAAATAGACACATTCTGGTTCATACTGGAGAGAAACCTTATGCTTGCGAATATTGTGATATGGCTTTTCGAGAAAAAACAAGATTGAATACGCACATGGTTATTCATACTGGAGATAAAAGACATATTTGTCATATTTGCCATAAGAGCTTTCGAGAAAAGTCAATGTTGAGAAAGCATATGTTAAGTCATACTGGTGATCGACCTTACGAATGCTATGTATGTCAGAAAGCATTTGCACAAAAAACAACTCTCAATAGTCATATTCTGACACATTCAACTGAAGGATCAGCCTATGAATGTActatatgtagaaaaatttacagAGACAGAATTGCATTAAGAAAACATATTATAACACATGCAAcagacaaaaataatgaatgtcctatatgtttaaaaaaatttactcacaAGATGGCATTGAGTAATCATATAACAACAAATCATTCTTTGTAA
Protein Sequence: MDPQYVKNEPEDTLPINCQVMDENIVSVVLKEEPGEKYEPNYMEDICLGTFDKVFQPVDHHEVDFPDDMVKLELDTENNHHHWAAQLANITLSENGEYELEEDHHFLNSSAAQKFYKIQCTLCKKWFLNNDSMVTHLKMHCSGNTCEVCHQTFMDNAGLHAHMLTHVGMSPVECTICQKRFAYKWCLRNHMQTHMTNKQFEYDTLQQVFLKRYGQSNDHVIRIDERPYMCHICQTSFKEKGNLSRHMLIHSGDKPYKCDICFASFREKAKLNMHISIHTGHKQFKCTMCHRSFVQKTALNNHMLAHSGEKPHACNVCEKTYKRKSELIRHTMIHTGERPYECQECLMTFREKAKLNSHMLVHTGEKPHECHICHKTCARKSDLNSHMLSHTGGQYDCKVCDKIFTRKSDLNRHILVHTGEKPYACEYCDMAFREKTRLNTHMVIHTGDKRHICHICHKSFREKSMLRKHMLSHTGDRPYECYVCQKAFAQKTTLNSHILTHSTEGSAYECTICRKIYRDRIALRKHIITHATDKNNECPICLKKFTHKMALSNHITTNHSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01469925;
90% Identity: iTF_01469925; iTF_01465606; iTF_01466506; iTF_01468237; iTF_01467379;
80% Identity: -