Tger016630.1
Basic Information
- Insect
- Torymus geranii
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_900474355.1
- Location
- UCWB01000257.1:13315-16081[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-111 3.7e-107 358.9 33.2 1 300 28 327 28 327 0.95 2 3 0.0075 2.5e+02 1.6 3.8 122 171 327 376 325 381 0.90 3 3 0.042 1.4e+03 -0.8 5.5 135 230 361 393 339 402 0.44
Sequence Information
- Coding Sequence
- ATGGAGTCGGTGGCTGGGAGGAGACGTACAGCCACTAGGCACTCAGCGGAAGATCAAGCACTTGATCAGATCGCTAAAGAGGCTGAGGCGAGGTTAGCTGCTAGGAGACAAGCTCGTGCAGAAGCACGTGAAATAAGGATGAGAGAATTAGAGAGACAGCAGAAGGAAGCTGAGGAAAATGCGGATAGAGTCTTTGATATGTGTACagCAGATGCTGGGAGAGCAATAAGAGTAACACCAGACCCTATTCGTGCTTCTCGTCTTCTTGCAAATACCAATAACTTTCAGTCAAGCCGAAGATCTTCAGAAGACTCTTTAGAAGAAGCAGGTCTTGGAAGAGATCTTAGATTGGAAGTCAAAGAACTTGAAGAAAAATTCAGAAAAGCCATGATTGCAAATGCTCAATTAGACAATGAAAAGTCTTCCTATGTATATCAAGTTGATTTACTAAAAGATAAGTTAGAAGAACTTGAAGAAACAGTTGCCCAATTACGTCGAGAACTCAGGGAAAAGAATCGGGAAGCAGATCAGTCTAAACGTTTAGGCCAGCGATTAAAAGAAGAATTAGATTTATGTACAGCACAGCTTTTGGAAAGAGACACATTAATACAAGAAAACGGACTGGTAATAGTAGAAGATGAAGGTAGTGGTAATGAAGATGATGAGACACAAAAAGAGAATGGGCCTGTCTGTCGAAAGAGAGTGCTAGTCAGTACAGAAGCTGcagaattattacaaaatgcGGGAGAAGGTTCTTTAgATGTTCGACTGAGAAAGTTTGCATCAGAGAAAAAAGAACTGCAAGATGAGATTAGGCATCTCAGGTTAGAATTAGAAGAAGCTAGGAATAGAATGAGGCCAGAACGATCCTCAGGTTCCACAATAGGCATATCTGATTCAGAAGATGCTCAAAGAGAATCCAATAAACTTTTGGCAGACTACAAATTCAAATTGCAGAAAACAGAACAAGATATGTCCACACTTCAAGCAACTGTTGCAAGGTTAGAGAGTCAAGTAATTCGCTATAAATCAGCAGCTGAAGCCTCTGAGAAAGCAGAAGATGAGTTAAAGGTTGAGAAAAGGAAACTACAAAGAGAGGTCAGAGAATCACAGAGCCGAGTCGAGGAGTTGGAAACATCAAATTCACATTTACAACGGCGACTAGATAAACTGAAAACTGCTAAATCAGCTCTATTGAAGGAACTTTGA
- Protein Sequence
- MESVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVFDMCTADAGRAIRVTPDPIRASRLLANTNNFQSSRRSSEDSLEEAGLGRDLRLEVKELEEKFRKAMIANAQLDNEKSSYVYQVDLLKDKLEELEETVAQLRRELREKNREADQSKRLGQRLKEELDLCTAQLLERDTLIQENGLVIVEDEGSGNEDDETQKENGPVCRKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELEEARNRMRPERSSGSTIGISDSEDAQRESNKLLADYKFKLQKTEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRESQSRVEELETSNSHLQRRLDKLKTAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01428278;
- 80% Identity
- iTF_01466214;